Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

Click here to switch to the map view.

The map label for this gene is afuA

Identifier: 77748719

GI number: 77748719

Start: 4113528

End: 4114577

Strand: Reverse

Name: afuA

Synonym: XAC3481

Alternate gene names: NA

Gene position: 4114577-4113528 (Counterclockwise)

Preceding gene: 21244207

Following gene: 21244205

Centisome position: 79.5

GC content: 67.62

Gene sequence:

>1050_bases
ATGCGGCCGATGTGGATGCTGGTGTTGCTGCTGGTCCATGGCATCGCCTGCGCGGCGCCAGGCGATGTGCGTCGCTTTCC
CGCACAGGGCCCGGTGCGTGTGCAGCTGCGCGTGCAGGGCTCCACCGACCTGGAAGTGTTCGGTGCAGTCATCCGGGACT
ACCAACGGTTGCATCCGGGCACCGAGGTGATCTACGAAGACGTGATCGCCTGGGACATCTATGACCGTTATCTGCACCCA
GGCCATGGCGCACCTGCTGCAGACATGCTGATCAGCGCCAGCATGGATCTGCAGACCAAACTGGTAAACGACGGCCACGC
GTTGACGCATCGCTCCGCACAGACCGAAGCCTTGCCGGCATGGGCGCAATGGCGCCATGAAGTGTTCGGCATCAGCTACG
AGCCGGTGGCCATCGTCTACAACACGCGCAAGCTGGATGCCGCCCGCGTGCCGCGCACGCGCCGGCAATTGCTGGCGTTG
TTGCGCATGCCCGATGCACCGCTGCGCGGCAAGGTCGGCACCTACGATGTCGAACGCAGCGGCGTGGGGTATCTGTTCGC
TACCCAGGACGGCCAGGTGGGCAGTATCGCCGGTGCGCTGCTCGCTGCGCTGGGGGCCAACCGGGTGGTGTTGGAAGAGC
GCACCGGCAGCTTGCTCGACCGCGTCAGCCGTGGCGAGCTGTTGCTGGCCTACAACGTGCTTGGCTCCTACGCACAGGCC
CGCATCGATGCGGGGGCGCCGCTGGGCATCGTGCAGCCGCAGGACTACACGCTGGTGGCGTTGCGCACGGCAGTGATCCC
CAAGACGGCGCCGCATGCGCCGGAGGCGCGCCGGTTTCTCGACTATCTGCTCTCGCCGCGCGGTCAGCAGGTGCTGTCGC
GCGAGGCGCGGCTGATGCCGATCCTGCCGGCCGCCGGCGGTCGCGGCGGTTCGGCGCAGCCACCATTCCGCCCGATCCCG
CTCGGCCCCGGCCTGCTGGTATACCTGGACAAGCTCAAACGCCGCCAGTTTCTGGATGCCTGGCGGGCGAGCACGCAGCC
GCCGCGCTAG

Upstream 100 bases:

>100_bases
TCAAGCGCGTGGTGGAAGCGCATGGCGGGCGCATCGATCTGGCCAACCGCATCGGTGGCGGCTTGATCGCCTCGATGCAT
TTTCCGGGAGGAGGGGCGTG

Downstream 100 bases:

>100_bases
AGCGTGTTATGCAGGTTGAGATGAGATGCGTTGGCCGTCAGCGGTGCGGCGCGGGTGCTGCGTGGCGCCGGCGTGGCTGG
CGCCAAGGCAAGCCGCGCGG

Product: periplasmic iron-binding protein

Products: NA

Alternate protein names: ABC-Type Fe3+ Transporter Periplasmic Protein; Iron ABC Transporter; HAMP Domain-Containing; Two-Component Sensor Histidine Kinase

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MRPMWMLVLLLVHGIACAAPGDVRRFPAQGPVRVQLRVQGSTDLEVFGAVIRDYQRLHPGTEVIYEDVIAWDIYDRYLHP
GHGAPAADMLISASMDLQTKLVNDGHALTHRSAQTEALPAWAQWRHEVFGISYEPVAIVYNTRKLDAARVPRTRRQLLAL
LRMPDAPLRGKVGTYDVERSGVGYLFATQDGQVGSIAGALLAALGANRVVLEERTGSLLDRVSRGELLLAYNVLGSYAQA
RIDAGAPLGIVQPQDYTLVALRTAVIPKTAPHAPEARRFLDYLLSPRGQQVLSREARLMPILPAAGGRGGSAQPPFRPIP
LGPGLLVYLDKLKRRQFLDAWRASTQPPR

Sequences:

>Translated_349_residues
MRPMWMLVLLLVHGIACAAPGDVRRFPAQGPVRVQLRVQGSTDLEVFGAVIRDYQRLHPGTEVIYEDVIAWDIYDRYLHP
GHGAPAADMLISASMDLQTKLVNDGHALTHRSAQTEALPAWAQWRHEVFGISYEPVAIVYNTRKLDAARVPRTRRQLLAL
LRMPDAPLRGKVGTYDVERSGVGYLFATQDGQVGSIAGALLAALGANRVVLEERTGSLLDRVSRGELLLAYNVLGSYAQA
RIDAGAPLGIVQPQDYTLVALRTAVIPKTAPHAPEARRFLDYLLSPRGQQVLSREARLMPILPAAGGRGGSAQPPFRPIP
LGPGLLVYLDKLKRRQFLDAWRASTQPPR
>Mature_349_residues
MRPMWMLVLLLVHGIACAAPGDVRRFPAQGPVRVQLRVQGSTDLEVFGAVIRDYQRLHPGTEVIYEDVIAWDIYDRYLHP
GHGAPAADMLISASMDLQTKLVNDGHALTHRSAQTEALPAWAQWRHEVFGISYEPVAIVYNTRKLDAARVPRTRRQLLAL
LRMPDAPLRGKVGTYDVERSGVGYLFATQDGQVGSIAGALLAALGANRVVLEERTGSLLDRVSRGELLLAYNVLGSYAQA
RIDAGAPLGIVQPQDYTLVALRTAVIPKTAPHAPEARRFLDYLLSPRGQQVLSREARLMPILPAAGGRGGSAQPPFRPIP
LGPGLLVYLDKLKRRQFLDAWRASTQPPR

Specific function: Unknown

COG id: COG1840

COG function: function code P; ABC-type Fe3+ transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38360; Mature: 38360

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPMWMLVLLLVHGIACAAPGDVRRFPAQGPVRVQLRVQGSTDLEVFGAVIRDYQRLHPG
CCHHHHHHHHHHHHHHHCCCCHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCC
TEVIYEDVIAWDIYDRYLHPGHGAPAADMLISASMDLQTKLVNDGHALTHRSAQTEALPA
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEECCCCCHHHCCCCCCCCCCH
WAQWRHEVFGISYEPVAIVYNTRKLDAARVPRTRRQLLALLRMPDAPLRGKVGTYDVERS
HHHHHHHHCCCCCCCEEEEEECCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCCEEECCC
GVGYLFATQDGQVGSIAGALLAALGANRVVLEERTGSLLDRVSRGELLLAYNVLGSYAQA
CCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCEEEEHHHHHHHHHH
RIDAGAPLGIVQPQDYTLVALRTAVIPKTAPHAPEARRFLDYLLSPRGQQVLSREARLMP
HCCCCCCCCEECCCCCEEEEEEHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCEEE
ILPAAGGRGGSAQPPFRPIPLGPGLLVYLDKLKRRQFLDAWRASTQPPR
EEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRPMWMLVLLLVHGIACAAPGDVRRFPAQGPVRVQLRVQGSTDLEVFGAVIRDYQRLHPG
CCHHHHHHHHHHHHHHHCCCCHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCC
TEVIYEDVIAWDIYDRYLHPGHGAPAADMLISASMDLQTKLVNDGHALTHRSAQTEALPA
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEECCCCCHHHCCCCCCCCCCH
WAQWRHEVFGISYEPVAIVYNTRKLDAARVPRTRRQLLALLRMPDAPLRGKVGTYDVERS
HHHHHHHHCCCCCCCEEEEEECCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCCEEECCC
GVGYLFATQDGQVGSIAGALLAALGANRVVLEERTGSLLDRVSRGELLLAYNVLGSYAQA
CCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCEEEEHHHHHHHHHH
RIDAGAPLGIVQPQDYTLVALRTAVIPKTAPHAPEARRFLDYLLSPRGQQVLSREARLMP
HCCCCCCCCEECCCCCEEEEEEHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCEEE
ILPAAGGRGGSAQPPFRPIPLGPGLLVYLDKLKRRQFLDAWRASTQPPR
EEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA