Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is afuA
Identifier: 77748719
GI number: 77748719
Start: 4113528
End: 4114577
Strand: Reverse
Name: afuA
Synonym: XAC3481
Alternate gene names: NA
Gene position: 4114577-4113528 (Counterclockwise)
Preceding gene: 21244207
Following gene: 21244205
Centisome position: 79.5
GC content: 67.62
Gene sequence:
>1050_bases ATGCGGCCGATGTGGATGCTGGTGTTGCTGCTGGTCCATGGCATCGCCTGCGCGGCGCCAGGCGATGTGCGTCGCTTTCC CGCACAGGGCCCGGTGCGTGTGCAGCTGCGCGTGCAGGGCTCCACCGACCTGGAAGTGTTCGGTGCAGTCATCCGGGACT ACCAACGGTTGCATCCGGGCACCGAGGTGATCTACGAAGACGTGATCGCCTGGGACATCTATGACCGTTATCTGCACCCA GGCCATGGCGCACCTGCTGCAGACATGCTGATCAGCGCCAGCATGGATCTGCAGACCAAACTGGTAAACGACGGCCACGC GTTGACGCATCGCTCCGCACAGACCGAAGCCTTGCCGGCATGGGCGCAATGGCGCCATGAAGTGTTCGGCATCAGCTACG AGCCGGTGGCCATCGTCTACAACACGCGCAAGCTGGATGCCGCCCGCGTGCCGCGCACGCGCCGGCAATTGCTGGCGTTG TTGCGCATGCCCGATGCACCGCTGCGCGGCAAGGTCGGCACCTACGATGTCGAACGCAGCGGCGTGGGGTATCTGTTCGC TACCCAGGACGGCCAGGTGGGCAGTATCGCCGGTGCGCTGCTCGCTGCGCTGGGGGCCAACCGGGTGGTGTTGGAAGAGC GCACCGGCAGCTTGCTCGACCGCGTCAGCCGTGGCGAGCTGTTGCTGGCCTACAACGTGCTTGGCTCCTACGCACAGGCC CGCATCGATGCGGGGGCGCCGCTGGGCATCGTGCAGCCGCAGGACTACACGCTGGTGGCGTTGCGCACGGCAGTGATCCC CAAGACGGCGCCGCATGCGCCGGAGGCGCGCCGGTTTCTCGACTATCTGCTCTCGCCGCGCGGTCAGCAGGTGCTGTCGC GCGAGGCGCGGCTGATGCCGATCCTGCCGGCCGCCGGCGGTCGCGGCGGTTCGGCGCAGCCACCATTCCGCCCGATCCCG CTCGGCCCCGGCCTGCTGGTATACCTGGACAAGCTCAAACGCCGCCAGTTTCTGGATGCCTGGCGGGCGAGCACGCAGCC GCCGCGCTAG
Upstream 100 bases:
>100_bases TCAAGCGCGTGGTGGAAGCGCATGGCGGGCGCATCGATCTGGCCAACCGCATCGGTGGCGGCTTGATCGCCTCGATGCAT TTTCCGGGAGGAGGGGCGTG
Downstream 100 bases:
>100_bases AGCGTGTTATGCAGGTTGAGATGAGATGCGTTGGCCGTCAGCGGTGCGGCGCGGGTGCTGCGTGGCGCCGGCGTGGCTGG CGCCAAGGCAAGCCGCGCGG
Product: periplasmic iron-binding protein
Products: NA
Alternate protein names: ABC-Type Fe3+ Transporter Periplasmic Protein; Iron ABC Transporter; HAMP Domain-Containing; Two-Component Sensor Histidine Kinase
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MRPMWMLVLLLVHGIACAAPGDVRRFPAQGPVRVQLRVQGSTDLEVFGAVIRDYQRLHPGTEVIYEDVIAWDIYDRYLHP GHGAPAADMLISASMDLQTKLVNDGHALTHRSAQTEALPAWAQWRHEVFGISYEPVAIVYNTRKLDAARVPRTRRQLLAL LRMPDAPLRGKVGTYDVERSGVGYLFATQDGQVGSIAGALLAALGANRVVLEERTGSLLDRVSRGELLLAYNVLGSYAQA RIDAGAPLGIVQPQDYTLVALRTAVIPKTAPHAPEARRFLDYLLSPRGQQVLSREARLMPILPAAGGRGGSAQPPFRPIP LGPGLLVYLDKLKRRQFLDAWRASTQPPR
Sequences:
>Translated_349_residues MRPMWMLVLLLVHGIACAAPGDVRRFPAQGPVRVQLRVQGSTDLEVFGAVIRDYQRLHPGTEVIYEDVIAWDIYDRYLHP GHGAPAADMLISASMDLQTKLVNDGHALTHRSAQTEALPAWAQWRHEVFGISYEPVAIVYNTRKLDAARVPRTRRQLLAL LRMPDAPLRGKVGTYDVERSGVGYLFATQDGQVGSIAGALLAALGANRVVLEERTGSLLDRVSRGELLLAYNVLGSYAQA RIDAGAPLGIVQPQDYTLVALRTAVIPKTAPHAPEARRFLDYLLSPRGQQVLSREARLMPILPAAGGRGGSAQPPFRPIP LGPGLLVYLDKLKRRQFLDAWRASTQPPR >Mature_349_residues MRPMWMLVLLLVHGIACAAPGDVRRFPAQGPVRVQLRVQGSTDLEVFGAVIRDYQRLHPGTEVIYEDVIAWDIYDRYLHP GHGAPAADMLISASMDLQTKLVNDGHALTHRSAQTEALPAWAQWRHEVFGISYEPVAIVYNTRKLDAARVPRTRRQLLAL LRMPDAPLRGKVGTYDVERSGVGYLFATQDGQVGSIAGALLAALGANRVVLEERTGSLLDRVSRGELLLAYNVLGSYAQA RIDAGAPLGIVQPQDYTLVALRTAVIPKTAPHAPEARRFLDYLLSPRGQQVLSREARLMPILPAAGGRGGSAQPPFRPIP LGPGLLVYLDKLKRRQFLDAWRASTQPPR
Specific function: Unknown
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38360; Mature: 38360
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPMWMLVLLLVHGIACAAPGDVRRFPAQGPVRVQLRVQGSTDLEVFGAVIRDYQRLHPG CCHHHHHHHHHHHHHHHCCCCHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCC TEVIYEDVIAWDIYDRYLHPGHGAPAADMLISASMDLQTKLVNDGHALTHRSAQTEALPA HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEECCCCCHHHCCCCCCCCCCH WAQWRHEVFGISYEPVAIVYNTRKLDAARVPRTRRQLLALLRMPDAPLRGKVGTYDVERS HHHHHHHHCCCCCCCEEEEEECCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCCEEECCC GVGYLFATQDGQVGSIAGALLAALGANRVVLEERTGSLLDRVSRGELLLAYNVLGSYAQA CCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCEEEEHHHHHHHHHH RIDAGAPLGIVQPQDYTLVALRTAVIPKTAPHAPEARRFLDYLLSPRGQQVLSREARLMP HCCCCCCCCEECCCCCEEEEEEHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCEEE ILPAAGGRGGSAQPPFRPIPLGPGLLVYLDKLKRRQFLDAWRASTQPPR EEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRPMWMLVLLLVHGIACAAPGDVRRFPAQGPVRVQLRVQGSTDLEVFGAVIRDYQRLHPG CCHHHHHHHHHHHHHHHCCCCHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCC TEVIYEDVIAWDIYDRYLHPGHGAPAADMLISASMDLQTKLVNDGHALTHRSAQTEALPA HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEECCCCCHHHCCCCCCCCCCH WAQWRHEVFGISYEPVAIVYNTRKLDAARVPRTRRQLLALLRMPDAPLRGKVGTYDVERS HHHHHHHHCCCCCCCEEEEEECCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCCEEECCC GVGYLFATQDGQVGSIAGALLAALGANRVVLEERTGSLLDRVSRGELLLAYNVLGSYAQA CCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCEEEEHHHHHHHHHH RIDAGAPLGIVQPQDYTLVALRTAVIPKTAPHAPEARRFLDYLLSPRGQQVLSREARLMP HCCCCCCCCEECCCCCEEEEEEHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCEEE ILPAAGGRGGSAQPPFRPIPLGPGLLVYLDKLKRRQFLDAWRASTQPPR EEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA