Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21242432
Identifier: 21242432
GI number: 21242432
Start: 1940380
End: 1941384
Strand: Reverse
Name: 21242432
Synonym: XAC1683
Alternate gene names: NA
Gene position: 1941384-1940380 (Counterclockwise)
Preceding gene: 77748604
Following gene: 21242431
Centisome position: 37.51
GC content: 69.45
Gene sequence:
>1005_bases ATGGATTCGCGTTGCCCGACGCGGTGCCTTCGCGTATCCGGACGCAATCGCCGTCGCTGCGGTGGTCTCGTCCGCCGACC TGGGGCACCATCGCGTCCCTGTCTGACACACCGCCCCACGCCATTGCCCACCGTTCCAGCTTCCAAGCCGCTCCCCTCCC GACCGCGACGGCATTGCGCCCACGCGGGCTTCTACGTGGGCGCACTGTCGGACAGTGCCGCACGTCGCCAGCTTTGCGAA GCGCGACCGCCCGTGTCCGCCCAGCAACCATGCCAACCGCGGGTGCGTCGCCAACCATACCGGCACCGCACGCTGCTGCA GTGGCTGCTGCTCACGCTGGCAGCCGGCGCCTGCGGCAGCGCCCCGGCCAAGGACTTCGGTGGTGCCGTGGCGCTGACCT CCAGCCTGATCGACCGCGGCATCTCGATCGCCCCCAACAAGGTCACCGTGCAGGCCGCCGGCTACTGGCTGCCCGCCCCC GGCTGGTCGGTTTCCACCTCGGTGGCGCTGCAGTCCCCCGCCTGGAGTGATCCGGTCGCGGTCACCGCACAGCTCGGACG TGCCTGGATGCTGGACGACCGCTGGCAGATGCAGGCCAGCCTGCTCTACTACGCCTACCCGACCGACCGCGCCACGCGCA CCTTCGACCGCCAGGAAGCCAGCCTGGCCTGGTCCTACCGCGACCTGCTGACGTTTTCGCTGTCCACCTTCAATTTCCCG CGGGCCGACCGGTCGCCGTGGAACGTGGCGTTCGATATCACCGCCAACGTCCCGCTGCGCAACGATGTCAGCCTGTCGCT CGGTGCCGGCTCGTCGCGCTTTCCAGCCATGGCCTACGGTGCAGCGCGCTCCAGCCGCTATCAGTACGGCCAGGTGGGCC TGAAGTGGAACCGCGCCGGATGGACACTGAAAGCCGAGCGCATCCTCACCAGCGGCAATACCCCGCGCATGCAGGGCGGC CCCGGCGACATGCCGTGGCTGGGCACGGTCGCCAGAACCTTCTGA
Upstream 100 bases:
>100_bases CGTGGCTGCGTCGGTTGCCAATGCGCCCAGCCGTGGCACCTGCCGGTGGCGGCCGCCTGCACAGCCAGGTATTGCAGGCG GCCGCCACCGGCCGGCCAGG
Downstream 100 bases:
>100_bases TCCACACGCAACCTTTTGCCTGCCAGCGCGCACTGACGTGGGTGACCCGCCATGCCTGCACCGATGAATGATACCGACAC CCTGGGCGATGCCACCGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MDSRCPTRCLRVSGRNRRRCGGLVRRPGAPSRPCLTHRPTPLPTVPASKPLPSRPRRHCAHAGFYVGALSDSAARRQLCE ARPPVSAQQPCQPRVRRQPYRHRTLLQWLLLTLAAGACGSAPAKDFGGAVALTSSLIDRGISIAPNKVTVQAAGYWLPAP GWSVSTSVALQSPAWSDPVAVTAQLGRAWMLDDRWQMQASLLYYAYPTDRATRTFDRQEASLAWSYRDLLTFSLSTFNFP RADRSPWNVAFDITANVPLRNDVSLSLGAGSSRFPAMAYGAARSSRYQYGQVGLKWNRAGWTLKAERILTSGNTPRMQGG PGDMPWLGTVARTF
Sequences:
>Translated_334_residues MDSRCPTRCLRVSGRNRRRCGGLVRRPGAPSRPCLTHRPTPLPTVPASKPLPSRPRRHCAHAGFYVGALSDSAARRQLCE ARPPVSAQQPCQPRVRRQPYRHRTLLQWLLLTLAAGACGSAPAKDFGGAVALTSSLIDRGISIAPNKVTVQAAGYWLPAP GWSVSTSVALQSPAWSDPVAVTAQLGRAWMLDDRWQMQASLLYYAYPTDRATRTFDRQEASLAWSYRDLLTFSLSTFNFP RADRSPWNVAFDITANVPLRNDVSLSLGAGSSRFPAMAYGAARSSRYQYGQVGLKWNRAGWTLKAERILTSGNTPRMQGG PGDMPWLGTVARTF >Mature_334_residues MDSRCPTRCLRVSGRNRRRCGGLVRRPGAPSRPCLTHRPTPLPTVPASKPLPSRPRRHCAHAGFYVGALSDSAARRQLCE ARPPVSAQQPCQPRVRRQPYRHRTLLQWLLLTLAAGACGSAPAKDFGGAVALTSSLIDRGISIAPNKVTVQAAGYWLPAP GWSVSTSVALQSPAWSDPVAVTAQLGRAWMLDDRWQMQASLLYYAYPTDRATRTFDRQEASLAWSYRDLLTFSLSTFNFP RADRSPWNVAFDITANVPLRNDVSLSLGAGSSRFPAMAYGAARSSRYQYGQVGLKWNRAGWTLKAERILTSGNTPRMQGG PGDMPWLGTVARTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36710; Mature: 36710
Theoretical pI: Translated: 11.57; Mature: 11.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSRCPTRCLRVSGRNRRRCGGLVRRPGAPSRPCLTHRPTPLPTVPASKPLPSRPRRHCA CCCCCCCHHHHCCCCCCHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH HAGFYVGALSDSAARRQLCEARPPVSAQQPCQPRVRRQPYRHRTLLQWLLLTLAAGACGS HCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCC APAKDFGGAVALTSSLIDRGISIAPNKVTVQAAGYWLPAPGWSVSTSVALQSPAWSDPVA CCCHHHCCHHHHHHHHHHCCCEECCCEEEEEECCEEECCCCCCCCCEEEECCCCCCCCHH VTAQLGRAWMLDDRWQMQASLLYYAYPTDRATRTFDRQEASLAWSYRDLLTFSLSTFNFP HHHHHCCEEEECCHHHEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RADRSPWNVAFDITANVPLRNDVSLSLGAGSSRFPAMAYGAARSSRYQYGQVGLKWNRAG CCCCCCCEEEEEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCEECCCCEEECCCC WTLKAERILTSGNTPRMQGGPGDMPWLGTVARTF CEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHCC >Mature Secondary Structure MDSRCPTRCLRVSGRNRRRCGGLVRRPGAPSRPCLTHRPTPLPTVPASKPLPSRPRRHCA CCCCCCCHHHHCCCCCCHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH HAGFYVGALSDSAARRQLCEARPPVSAQQPCQPRVRRQPYRHRTLLQWLLLTLAAGACGS HCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCC APAKDFGGAVALTSSLIDRGISIAPNKVTVQAAGYWLPAPGWSVSTSVALQSPAWSDPVA CCCHHHCCHHHHHHHHHHCCCEECCCEEEEEECCEEECCCCCCCCCEEEECCCCCCCCHH VTAQLGRAWMLDDRWQMQASLLYYAYPTDRATRTFDRQEASLAWSYRDLLTFSLSTFNFP HHHHHCCEEEECCHHHEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RADRSPWNVAFDITANVPLRNDVSLSLGAGSSRFPAMAYGAARSSRYQYGQVGLKWNRAG CCCCCCCEEEEEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCEECCCCEEECCCC WTLKAERILTSGNTPRMQGGPGDMPWLGTVARTF CEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA