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The map label for this gene is fasD [H]

Identifier: 77748585

GI number: 77748585

Start: 1640886

End: 1643237

Strand: Reverse

Name: fasD [H]

Synonym: XAC1425

Alternate gene names: 77748585

Gene position: 1643237-1640886 (Counterclockwise)

Preceding gene: 21242179

Following gene: 21242177

Centisome position: 31.75

GC content: 67.86

Gene sequence:

>2352_bases
ATGACGCTGCTTGCGACCGCCAGCTGCCTGGGCAGCGCCGCAGCCGGCGATCTGGCCGATGTGGCGTCGCTTCCCGATCC
GCCGCCGCCCAGCGCCACGCCACAGCCGCAAACACTCTATCTGGACGTGACCTTGAACCAGGCCGACCGCGGCTTGGCGC
CGTTCGAACTGGTCGACGGGCGGCTGCGCGGCTCGGTGGAAACCCTGCGCAAACTCGGCTTCATCCTGGCCGACCGCGTC
CCTGGCGAATTGGTCGATCTGGACCGCCTGCCCGACGTGGAAGTGCGCTACGACGCCGCGCTGCAGCGGCTCGCGCTGCA
GGCGCCGCTGGCGCAGCTGTCGTTGTCCACCACGGTGCTGAAAGCCGAAGAAGTGGCTCCGCCCAGTGCCAGCGCATCGC
CAGGCATGCTGCTCAATTACGACCTGTATGCCACCCGCAACGCCGGCGTCAGCAGCGCGTCGCTGGCCACCGAAGTGCGC
GCCTTCGGCATCGGGCGCGGCATGGTCGATACCACTGCGGTCTTTCTGGCCTACGACCGTCCACAGGACAAACGCTGGCG
CAGCGAAGCGGTGCGCCTGGATAGTGCCTGGCAGATGGATTTCCCGGATAGCGCCACCAGCCTGAGCGTGGGCGATTTCT
ATAGCGGCTTTGTCGACTGGAGCCGCTCGATCCGCCTGGGCGGCGTGCAGATCGGCCGCAATTACGCCTTGCAACCATAT
CGGGTACTGACGCCCACGCCGAGCTTTCTCGGCGAAGCGGCGGTGCCTTCCACCGTTGAGCTGTATGTGGACGGCATGCG
CCAGTACAGCGGCCAGGTGCCGGCCGGCCCGTTTCAGCTGGCCGCGCAACCGGGCATCAGCGGCACGGGCCAGGCGCAGA
TCGTGGTGACCGATGCGTTCGGCCGCGTGCGTCGGCTGGATTTTGCGTTCTATGGCACACCGCAGTTGCTGGCGCGCGGC
ATTTCCGAATGGTCGGCCGGCATCGGCCATCTGCGCCGCGACTACGGCGTGCGCTCGTTTTCCTATGACCAACGTCGTGT
GGCCAGCGCCACCTTTCGCGAAGGCCTGCGCGACGACTTCACGATCGAAGCGCATGCCGAAACTGGCGGTGGCGTGATCA
ATGCAGGCGCGGGCGGCGTGTGGTTGCTTGGCGTGGGCGGTGTATTCAACGCCGCCTACGCGCACGGCCGGATGGACGCG
TTGCGTGGCGGCCAGTACGTGCTGGGCTACGCCTGGAACAACCGGCGTTTCAACGTCAATCTGGGCAGCCAGCGCACCCA
TGGCGATTACCGCGACCTGGGCGCGTTGCAAGGCGCCCTGCCAGCGCGCGTCAGCGACCGCGCAGCACTCGGCGTCAACG
TCGACCCGATCGGTTCGCTCGGCACCAGCTATGTGCGGCTGAGCTATCCGCAGGGCGATACCTCGCGCTATGCGAGCGTG
TTCTGGTCGCGCAGCTTCGGGCGCAACTGGGCGGCCAATTTATCGGGCAATCAGAATCTGGATGTCCCCAGCGATCGCAG
CCTGTACCTGTCGCTGTCGACCACCTTCGGCGAAGTGCGTCAGGCCAGCGCATCGATGCAGCGCAACGGCGACCGCACCG
GCGTGGTGGCCGATGTCAGCCAGCCGCTGCCTGGCGATGGCGATCTGGGCGGCATCGGCTGGCGCCTGCAAGGACGTGCC
GGCGACGATGCCAGCGGCGGGCTGGCCGAACTGGGCTGGTTGAACCGGGTCGGCCGTTACAACCTCGGCGCAGCAACCCA
GGACGGCGACAGCTTCGGCTATGCCAGCGCCAGCGGCAGCCTGGTGTGGATGAACGGCCGCACCTTCGCCGCGCGCGATA
TCCAGGACGCGTTCGCGGTGGTCACCACCGACGGCCAGCCCGGCATTCCGGTGCGGCTGGAAAACCGCTTGATCGGGGTC
ACCGACGCGCGCGGCACCCTGCTGGTCACGCCACTGCAATCCTGGCAGCGCAACCAGCTCTCCATCGACACCTTGAGCCT
GCCGGCGGACCTGCGCGTGGACCGGGTCGACACCACGGTGACACCGCGCCAGCAATCCGGTGTGGCGGTGCGCTTCGGCA
TCACCCGCGTGCGCGCCGCCATCATCGTGCTGCACGATGCGCACGGCGCGCCGTTGCCCGTCGGCAGCATGGTGCAGCGC
GACGGCAGCACCGACCGCGTGGTGGTCGGCTACGACGGCGAAACCTATCTGGACAACCTGCAACGCGACAACCGCCTCAT
GGTGGACCTGCCCCAGGGCCGTTGCGTTGCGCAGTTCGCGTATCCAGCCGACCCGGGCGGCATCCCGCGAGTGGGCCCGC
TGCAGTGCATCCCTGAGCAGACCACGCCATGA

Upstream 100 bases:

>100_bases
CAGTTCGGCCGCGGCACCATCATCGCAAGGATCAATGGTGAGGCTGACGAACGTACTTTGTTGGCCGCGCCGACGGCGCC
TTGATGCGGCGCGACTGGCG

Downstream 100 bases:

>100_bases
GCATGTCCACGTGTTGGCGCCTGATGCTCGCGCTGACGATCGCGATGTTGTGGCTTTGGCCCAGCGAGCGGGCGCACGCG
GACACCACCTGCACCGTCAC

Product: outer membrane usher protein FasD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 783; Mature: 782

Protein sequence:

>783_residues
MTLLATASCLGSAAAGDLADVASLPDPPPPSATPQPQTLYLDVTLNQADRGLAPFELVDGRLRGSVETLRKLGFILADRV
PGELVDLDRLPDVEVRYDAALQRLALQAPLAQLSLSTTVLKAEEVAPPSASASPGMLLNYDLYATRNAGVSSASLATEVR
AFGIGRGMVDTTAVFLAYDRPQDKRWRSEAVRLDSAWQMDFPDSATSLSVGDFYSGFVDWSRSIRLGGVQIGRNYALQPY
RVLTPTPSFLGEAAVPSTVELYVDGMRQYSGQVPAGPFQLAAQPGISGTGQAQIVVTDAFGRVRRLDFAFYGTPQLLARG
ISEWSAGIGHLRRDYGVRSFSYDQRRVASATFREGLRDDFTIEAHAETGGGVINAGAGGVWLLGVGGVFNAAYAHGRMDA
LRGGQYVLGYAWNNRRFNVNLGSQRTHGDYRDLGALQGALPARVSDRAALGVNVDPIGSLGTSYVRLSYPQGDTSRYASV
FWSRSFGRNWAANLSGNQNLDVPSDRSLYLSLSTTFGEVRQASASMQRNGDRTGVVADVSQPLPGDGDLGGIGWRLQGRA
GDDASGGLAELGWLNRVGRYNLGAATQDGDSFGYASASGSLVWMNGRTFAARDIQDAFAVVTTDGQPGIPVRLENRLIGV
TDARGTLLVTPLQSWQRNQLSIDTLSLPADLRVDRVDTTVTPRQQSGVAVRFGITRVRAAIIVLHDAHGAPLPVGSMVQR
DGSTDRVVVGYDGETYLDNLQRDNRLMVDLPQGRCVAQFAYPADPGGIPRVGPLQCIPEQTTP

Sequences:

>Translated_783_residues
MTLLATASCLGSAAAGDLADVASLPDPPPPSATPQPQTLYLDVTLNQADRGLAPFELVDGRLRGSVETLRKLGFILADRV
PGELVDLDRLPDVEVRYDAALQRLALQAPLAQLSLSTTVLKAEEVAPPSASASPGMLLNYDLYATRNAGVSSASLATEVR
AFGIGRGMVDTTAVFLAYDRPQDKRWRSEAVRLDSAWQMDFPDSATSLSVGDFYSGFVDWSRSIRLGGVQIGRNYALQPY
RVLTPTPSFLGEAAVPSTVELYVDGMRQYSGQVPAGPFQLAAQPGISGTGQAQIVVTDAFGRVRRLDFAFYGTPQLLARG
ISEWSAGIGHLRRDYGVRSFSYDQRRVASATFREGLRDDFTIEAHAETGGGVINAGAGGVWLLGVGGVFNAAYAHGRMDA
LRGGQYVLGYAWNNRRFNVNLGSQRTHGDYRDLGALQGALPARVSDRAALGVNVDPIGSLGTSYVRLSYPQGDTSRYASV
FWSRSFGRNWAANLSGNQNLDVPSDRSLYLSLSTTFGEVRQASASMQRNGDRTGVVADVSQPLPGDGDLGGIGWRLQGRA
GDDASGGLAELGWLNRVGRYNLGAATQDGDSFGYASASGSLVWMNGRTFAARDIQDAFAVVTTDGQPGIPVRLENRLIGV
TDARGTLLVTPLQSWQRNQLSIDTLSLPADLRVDRVDTTVTPRQQSGVAVRFGITRVRAAIIVLHDAHGAPLPVGSMVQR
DGSTDRVVVGYDGETYLDNLQRDNRLMVDLPQGRCVAQFAYPADPGGIPRVGPLQCIPEQTTP
>Mature_782_residues
TLLATASCLGSAAAGDLADVASLPDPPPPSATPQPQTLYLDVTLNQADRGLAPFELVDGRLRGSVETLRKLGFILADRVP
GELVDLDRLPDVEVRYDAALQRLALQAPLAQLSLSTTVLKAEEVAPPSASASPGMLLNYDLYATRNAGVSSASLATEVRA
FGIGRGMVDTTAVFLAYDRPQDKRWRSEAVRLDSAWQMDFPDSATSLSVGDFYSGFVDWSRSIRLGGVQIGRNYALQPYR
VLTPTPSFLGEAAVPSTVELYVDGMRQYSGQVPAGPFQLAAQPGISGTGQAQIVVTDAFGRVRRLDFAFYGTPQLLARGI
SEWSAGIGHLRRDYGVRSFSYDQRRVASATFREGLRDDFTIEAHAETGGGVINAGAGGVWLLGVGGVFNAAYAHGRMDAL
RGGQYVLGYAWNNRRFNVNLGSQRTHGDYRDLGALQGALPARVSDRAALGVNVDPIGSLGTSYVRLSYPQGDTSRYASVF
WSRSFGRNWAANLSGNQNLDVPSDRSLYLSLSTTFGEVRQASASMQRNGDRTGVVADVSQPLPGDGDLGGIGWRLQGRAG
DDASGGLAELGWLNRVGRYNLGAATQDGDSFGYASASGSLVWMNGRTFAARDIQDAFAVVTTDGQPGIPVRLENRLIGVT
DARGTLLVTPLQSWQRNQLSIDTLSLPADLRVDRVDTTVTPRQQSGVAVRFGITRVRAAIIVLHDAHGAPLPVGSMVQRD
GSTDRVVVGYDGETYLDNLQRDNRLMVDLPQGRCVAQFAYPADPGGIPRVGPLQCIPEQTTP

Specific function: Involved in the export and assembly of the 987P fimbriae subunits across the outer membrane [H]

COG id: COG3188

COG function: function code NU; P pilus assembly protein, porin PapC

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial export usher family [H]

Homologues:

Organism=Escherichia coli, GI1789533, Length=602, Percent_Identity=22.5913621262458, Blast_Score=80, Evalue=7e-16,
Organism=Escherichia coli, GI1786744, Length=750, Percent_Identity=20.5333333333333, Blast_Score=77, Evalue=4e-15,
Organism=Escherichia coli, GI1789610, Length=388, Percent_Identity=25, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1790772, Length=349, Percent_Identity=22.3495702005731, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000015
- InterPro:   IPR018030 [H]

Pfam domain/function: PF00577 Usher [H]

EC number: NA

Molecular weight: Translated: 83864; Mature: 83733

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLLATASCLGSAAAGDLADVASLPDPPPPSATPQPQTLYLDVTLNQADRGLAPFELVDG
CCEEEEHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHCC
RLRGSVETLRKLGFILADRVPGELVDLDRLPDVEVRYDAALQRLALQAPLAQLSLSTTVL
HHCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHEEE
KAEEVAPPSASASPGMLLNYDLYATRNAGVSSASLATEVRAFGIGRGMVDTTAVFLAYDR
EHHHCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECC
PQDKRWRSEAVRLDSAWQMDFPDSATSLSVGDFYSGFVDWSRSIRLGGVQIGRNYALQPY
CCCHHHHHHHEECCCCEECCCCCCCCEEECHHHHHHHHHHCCCEEECCEEECCCCCCCCE
RVLTPTPSFLGEAAVPSTVELYVDGMRQYSGQVPAGPFQLAAQPGISGTGQAQIVVTDAF
EEECCCHHHHCCCCCCCEEHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEECCC
GRVRRLDFAFYGTPQLLARGISEWSAGIGHLRRDYGVRSFSYDQRRVASATFREGLRDDF
CCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCE
TIEAHAETGGGVINAGAGGVWLLGVGGVFNAAYAHGRMDALRGGQYVLGYAWNNRRFNVN
EEEEECCCCCCEEECCCCCEEEEECCCHHHHHHHCCCHHHHCCCCEEEEEEECCEEEEEE
LGSQRTHGDYRDLGALQGALPARVSDRAALGVNVDPIGSLGTSYVRLSYPQGDTSRYASV
CCCCCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCEEEEECCCCCHHHHHHH
FWSRSFGRNWAANLSGNQNLDVPSDRSLYLSLSTTFGEVRQASASMQRNGDRTGVVADVS
HHHHCCCCCEEECCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCEEEECC
QPLPGDGDLGGIGWRLQGRAGDDASGGLAELGWLNRVGRYNLGAATQDGDSFGYASASGS
CCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCC
LVWMNGRTFAARDIQDAFAVVTTDGQPGIPVRLENRLIGVTDARGTLLVTPLQSWQRNQL
EEEECCCEEECCCCCCEEEEEECCCCCCCCEEECCEEEEEECCCCEEEEECHHHCCCCCE
SIDTLSLPADLRVDRVDTTVTPRQQSGVAVRFGITRVRAAIIVLHDAHGAPLPVGSMVQR
EEEEECCCCCCEEECCCCCCCCCCCCCEEEEECHHEEEEEEEEEECCCCCCCCHHHHHHC
DGSTDRVVVGYDGETYLDNLQRDNRLMVDLPQGRCVAQFAYPADPGGIPRVGPLQCIPEQ
CCCCCEEEEECCCHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCEECCCC
TTP
CCC
>Mature Secondary Structure 
TLLATASCLGSAAAGDLADVASLPDPPPPSATPQPQTLYLDVTLNQADRGLAPFELVDG
CEEEEHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHCC
RLRGSVETLRKLGFILADRVPGELVDLDRLPDVEVRYDAALQRLALQAPLAQLSLSTTVL
HHCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHEEE
KAEEVAPPSASASPGMLLNYDLYATRNAGVSSASLATEVRAFGIGRGMVDTTAVFLAYDR
EHHHCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECC
PQDKRWRSEAVRLDSAWQMDFPDSATSLSVGDFYSGFVDWSRSIRLGGVQIGRNYALQPY
CCCHHHHHHHEECCCCEECCCCCCCCEEECHHHHHHHHHHCCCEEECCEEECCCCCCCCE
RVLTPTPSFLGEAAVPSTVELYVDGMRQYSGQVPAGPFQLAAQPGISGTGQAQIVVTDAF
EEECCCHHHHCCCCCCCEEHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEECCC
GRVRRLDFAFYGTPQLLARGISEWSAGIGHLRRDYGVRSFSYDQRRVASATFREGLRDDF
CCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCE
TIEAHAETGGGVINAGAGGVWLLGVGGVFNAAYAHGRMDALRGGQYVLGYAWNNRRFNVN
EEEEECCCCCCEEECCCCCEEEEECCCHHHHHHHCCCHHHHCCCCEEEEEEECCEEEEEE
LGSQRTHGDYRDLGALQGALPARVSDRAALGVNVDPIGSLGTSYVRLSYPQGDTSRYASV
CCCCCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCEEEEECCCCCHHHHHHH
FWSRSFGRNWAANLSGNQNLDVPSDRSLYLSLSTTFGEVRQASASMQRNGDRTGVVADVS
HHHHCCCCCEEECCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCEEEECC
QPLPGDGDLGGIGWRLQGRAGDDASGGLAELGWLNRVGRYNLGAATQDGDSFGYASASGS
CCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCC
LVWMNGRTFAARDIQDAFAVVTTDGQPGIPVRLENRLIGVTDARGTLLVTPLQSWQRNQL
EEEECCCEEECCCCCCEEEEEECCCCCCCCEEECCEEEEEECCCCEEEEECHHHCCCCCE
SIDTLSLPADLRVDRVDTTVTPRQQSGVAVRFGITRVRAAIIVLHDAHGAPLPVGSMVQR
EEEEECCCCCCEEECCCCCCCCCCCCCEEEEECHHEEEEEEEEEECCCCCCCCHHHHHHC
DGSTDRVVVGYDGETYLDNLQRDNRLMVDLPQGRCVAQFAYPADPGGIPRVGPLQCIPEQ
CCCCCEEEEECCCHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCEECCCC
TTP
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7906265 [H]