Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 77748579
Identifier: 77748579
GI number: 77748579
Start: 1560043
End: 1561299
Strand: Reverse
Name: 77748579
Synonym: XAC1351
Alternate gene names: NA
Gene position: 1561299-1560043 (Counterclockwise)
Preceding gene: 21242105
Following gene: 21242103
Centisome position: 30.17
GC content: 70.49
Gene sequence:
>1257_bases ATGCAACCCTCCTCTCTTGCAGACCTCACCCGCGCCGCGCAACGCCAGCAACCCGGCGCGATCAACGCGCTGGCCCAGGC GCTGGTGCGTGCCGGCCAGCCGGAAGACGCGTTTGCCTGGTATTCGCGCAGTGCCGCCGCCGGCGATGCGCTGGCGCAGG TCGAAGCCGGGCGCATGCGTGCCTATGGCGTCGGTTGCGAGATGGACGTCGGTCAGGCGCGTGCGCACTGGGAGCTGGCC GAGCGGCAGGGCGCTGCGGCAGCACGCTATCTGCTGGCGACCCTGGCTGTGGGAGAGCAGCCGCTGGCCCTGGCCGGCAC TGCACAGGATCGACTGCAGTCGGCAGCCGCTGCCGACTACCCGCCAGCGCTACGCGCCATCGCCATCCAGCGCGGGCGTG TGGCGCATCCGGAGCGGCAACGGCACTGCGTCGCCTTGCTGGAACGTGCGGCGGCAGGCGGCGATGCCGTGTCGGCCGCA CTGTTGGCCGAGCGCCTGCTGCGTGGCGAAGGCGTGCCGCCCCAGCCCGATGCCGCTGCACAGCTCTTGCAGCAGTTGCA GCCCCTGGGCATGACCGCGCTACCGGCGGTGGACATCGCGCCGCCAGACCCCGCAGACGACACCGCCGATCACCGCATCG CATTCGCACCGCGTGTTGGCCCGGTGCGACGCCACACGGCCCCACGCATCGAAGAATATGCCGCGGTCCTGTCGGCCGAC GAATGTCGCTTGCTCATGCTGCTGGCGCGACCGCATCTGCGTGCCTCGAAGGTGATCGATCCCAACGATGCCAGCACCCA GCGCGCACCGATCCGTACCAGCCGCGGTGCGACATTGGACCCGATCATCGAAGACTTCGCCGCGCGTGCCGCGCAGGCAC GACTGGCAGCCTGCGCACAGCTACCGCTCGCCCACGCAGAACCGCTCTCGGTGCTGTGCTACGCGCCGGGCGAGCAGTAC CGCGCGCACCGCGACTATCTGCCGCCCGGAACGATCGCCGCCGACCGTCCCACCGCCGGCAACCGCCAGCGCACCGTCTG CGTCTATCTCAACGACGTCGGCGCGGGTGGCGACACCGAGTTTCCGATCGCTGGCGTTCGCGTGCGGCCACGCCCCGGCA CGCTGGTCTGCTTCGACAACCTGCATGCCGATGGCCGCCCGGACGCCGATTCGCTGCACGCCGGTCTGCCGGTCACGGCA GGCAGCAAATGGTTGGGGACGCTGTGGTTCCGCCAGCAGCGCTATCGGCATTGGTGA
Upstream 100 bases:
>100_bases ATGAGCAGGTCCCCCCTCGTACACTGCAGTCCCGAGCGCGCCGCCTACCTCCGCCTGACAACCGCTCGCTACGTGGCGTC GGCCACTCTAGGATGCGCGC
Downstream 100 bases:
>100_bases ACAGATTCATGCACAAGCCACTGCCGACGTGGTTTAAAATGTTGCAGCGCGACGTGATCGGACAGGATCTGCAAACGTCG CGTTTTTTGTTTCCCACGGC
Product: hypothetical protein
Products: NA
Alternate protein names: 2OG-Fe(II) Oxygenase; Prolyl 4-Hydroxylase Alpha Subunit; Oxidoreductase 2OG-Fe(II) Oxygenase Family; Oxygenase; Procollagen-Proline 2-Oxoglutarate-4-Dioxygenase; Response Regulator Receiver Domain-Containing Protein; 2OG-Fe(II) Oxygenase Family Oxidoreductase; Prolyl 4-Hydroxylase Subunit Alpha; 2OG-Fe(II) Oxygenase Superfamily Protein; 2OG-Fe(II) Oxygenase Family Protein; Procollagen-Proline 2-Oxoglutarate-4- Dioxygenase; Prolyl 4-Hydroxylase
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MQPSSLADLTRAAQRQQPGAINALAQALVRAGQPEDAFAWYSRSAAAGDALAQVEAGRMRAYGVGCEMDVGQARAHWELA ERQGAAAARYLLATLAVGEQPLALAGTAQDRLQSAAAADYPPALRAIAIQRGRVAHPERQRHCVALLERAAAGGDAVSAA LLAERLLRGEGVPPQPDAAAQLLQQLQPLGMTALPAVDIAPPDPADDTADHRIAFAPRVGPVRRHTAPRIEEYAAVLSAD ECRLLMLLARPHLRASKVIDPNDASTQRAPIRTSRGATLDPIIEDFAARAAQARLAACAQLPLAHAEPLSVLCYAPGEQY RAHRDYLPPGTIAADRPTAGNRQRTVCVYLNDVGAGGDTEFPIAGVRVRPRPGTLVCFDNLHADGRPDADSLHAGLPVTA GSKWLGTLWFRQQRYRHW
Sequences:
>Translated_418_residues MQPSSLADLTRAAQRQQPGAINALAQALVRAGQPEDAFAWYSRSAAAGDALAQVEAGRMRAYGVGCEMDVGQARAHWELA ERQGAAAARYLLATLAVGEQPLALAGTAQDRLQSAAAADYPPALRAIAIQRGRVAHPERQRHCVALLERAAAGGDAVSAA LLAERLLRGEGVPPQPDAAAQLLQQLQPLGMTALPAVDIAPPDPADDTADHRIAFAPRVGPVRRHTAPRIEEYAAVLSAD ECRLLMLLARPHLRASKVIDPNDASTQRAPIRTSRGATLDPIIEDFAARAAQARLAACAQLPLAHAEPLSVLCYAPGEQY RAHRDYLPPGTIAADRPTAGNRQRTVCVYLNDVGAGGDTEFPIAGVRVRPRPGTLVCFDNLHADGRPDADSLHAGLPVTA GSKWLGTLWFRQQRYRHW >Mature_418_residues MQPSSLADLTRAAQRQQPGAINALAQALVRAGQPEDAFAWYSRSAAAGDALAQVEAGRMRAYGVGCEMDVGQARAHWELA ERQGAAAARYLLATLAVGEQPLALAGTAQDRLQSAAAADYPPALRAIAIQRGRVAHPERQRHCVALLERAAAGGDAVSAA LLAERLLRGEGVPPQPDAAAQLLQQLQPLGMTALPAVDIAPPDPADDTADHRIAFAPRVGPVRRHTAPRIEEYAAVLSAD ECRLLMLLARPHLRASKVIDPNDASTQRAPIRTSRGATLDPIIEDFAARAAQARLAACAQLPLAHAEPLSVLCYAPGEQY RAHRDYLPPGTIAADRPTAGNRQRTVCVYLNDVGAGGDTEFPIAGVRVRPRPGTLVCFDNLHADGRPDADSLHAGLPVTA GSKWLGTLWFRQQRYRHW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI63252886, Length=261, Percent_Identity=30.6513409961686, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI217272849, Length=261, Percent_Identity=29.8850574712644, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI63252888, Length=261, Percent_Identity=29.8850574712644, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI63252893, Length=250, Percent_Identity=31.2, Blast_Score=98, Evalue=1e-20, Organism=Homo sapiens, GI63252891, Length=250, Percent_Identity=31.2, Blast_Score=98, Evalue=1e-20, Organism=Homo sapiens, GI217272861, Length=250, Percent_Identity=31.2, Blast_Score=98, Evalue=1e-20, Organism=Homo sapiens, GI4758868, Length=257, Percent_Identity=30.7392996108949, Blast_Score=96, Evalue=6e-20, Organism=Homo sapiens, GI217272863, Length=257, Percent_Identity=30.7392996108949, Blast_Score=96, Evalue=6e-20, Organism=Homo sapiens, GI33589818, Length=203, Percent_Identity=32.512315270936, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI217272851, Length=261, Percent_Identity=27.9693486590038, Blast_Score=82, Evalue=1e-15, Organism=Caenorhabditis elegans, GI193209068, Length=148, Percent_Identity=31.0810810810811, Blast_Score=78, Evalue=9e-15, Organism=Caenorhabditis elegans, GI193209070, Length=149, Percent_Identity=30.8724832214765, Blast_Score=78, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17541712, Length=186, Percent_Identity=28.494623655914, Blast_Score=73, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17552840, Length=202, Percent_Identity=26.7326732673267, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24651418, Length=205, Percent_Identity=32.6829268292683, Blast_Score=100, Evalue=3e-21, Organism=Drosophila melanogaster, GI24651407, Length=212, Percent_Identity=32.0754716981132, Blast_Score=93, Evalue=3e-19, Organism=Drosophila melanogaster, GI24651424, Length=196, Percent_Identity=31.6326530612245, Blast_Score=92, Evalue=9e-19, Organism=Drosophila melanogaster, GI281361323, Length=148, Percent_Identity=33.1081081081081, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI221460681, Length=193, Percent_Identity=32.6424870466321, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI24651477, Length=186, Percent_Identity=31.7204301075269, Blast_Score=90, Evalue=3e-18, Organism=Drosophila melanogaster, GI116008130, Length=152, Percent_Identity=33.5526315789474, Blast_Score=89, Evalue=7e-18, Organism=Drosophila melanogaster, GI116008537, Length=152, Percent_Identity=33.5526315789474, Blast_Score=89, Evalue=8e-18, Organism=Drosophila melanogaster, GI116008434, Length=189, Percent_Identity=29.1005291005291, Blast_Score=86, Evalue=6e-17, Organism=Drosophila melanogaster, GI24651430, Length=180, Percent_Identity=30, Blast_Score=83, Evalue=3e-16, Organism=Drosophila melanogaster, GI78706702, Length=145, Percent_Identity=31.0344827586207, Blast_Score=83, Evalue=3e-16, Organism=Drosophila melanogaster, GI24651420, Length=187, Percent_Identity=29.9465240641711, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI221512818, Length=116, Percent_Identity=33.6206896551724, Blast_Score=79, Evalue=7e-15, Organism=Drosophila melanogaster, GI21358309, Length=202, Percent_Identity=32.6732673267327, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24651416, Length=205, Percent_Identity=32.1951219512195, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI21358233, Length=186, Percent_Identity=27.4193548387097, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI116008128, Length=165, Percent_Identity=30.9090909090909, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI116008432, Length=165, Percent_Identity=30.9090909090909, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44638; Mature: 44638
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPSSLADLTRAAQRQQPGAINALAQALVRAGQPEDAFAWYSRSAAAGDALAQVEAGRMR CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHCCHHCCHHHHHHHHCCEE AYGVGCEMDVGQARAHWELAERQGAAAARYLLATLAVGEQPLALAGTAQDRLQSAAAADY EEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHCCCC PPALRAIAIQRGRVAHPERQRHCVALLERAAAGGDAVSAALLAERLLRGEGVPPQPDAAA CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHH QLLQQLQPLGMTALPAVDIAPPDPADDTADHRIAFAPRVGPVRRHTAPRIEEYAAVLSAD HHHHHHHCCCCCCCCEEECCCCCCCCCCCCCEEEECCCCCCHHHCCCHHHHHHHHHHCCC ECRLLMLLARPHLRASKVIDPNDASTQRAPIRTSRGATLDPIIEDFAARAAQARLAACAQ CHHEEHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LPLAHAEPLSVLCYAPGEQYRAHRDYLPPGTIAADRPTAGNRQRTVCVYLNDVGAGGDTE CCCCCCCCCEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCC FPIAGVRVRPRPGTLVCFDNLHADGRPDADSLHAGLPVTAGSKWLGTLWFRQQRYRHW CCEECEEECCCCCEEEEEECCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MQPSSLADLTRAAQRQQPGAINALAQALVRAGQPEDAFAWYSRSAAAGDALAQVEAGRMR CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHCCHHCCHHHHHHHHCCEE AYGVGCEMDVGQARAHWELAERQGAAAARYLLATLAVGEQPLALAGTAQDRLQSAAAADY EEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHCCCC PPALRAIAIQRGRVAHPERQRHCVALLERAAAGGDAVSAALLAERLLRGEGVPPQPDAAA CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHH QLLQQLQPLGMTALPAVDIAPPDPADDTADHRIAFAPRVGPVRRHTAPRIEEYAAVLSAD HHHHHHHCCCCCCCCEEECCCCCCCCCCCCCEEEECCCCCCHHHCCCHHHHHHHHHHCCC ECRLLMLLARPHLRASKVIDPNDASTQRAPIRTSRGATLDPIIEDFAARAAQARLAACAQ CHHEEHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LPLAHAEPLSVLCYAPGEQYRAHRDYLPPGTIAADRPTAGNRQRTVCVYLNDVGAGGDTE CCCCCCCCCEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCC FPIAGVRVRPRPGTLVCFDNLHADGRPDADSLHAGLPVTAGSKWLGTLWFRQQRYRHW CCEECEEECCCCCEEEEEECCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA