Definition | Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence. |
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Accession | NC_007494 |
Length | 943,016 |
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The map label for this gene is 77465817
Identifier: 77465817
GI number: 77465817
Start: 934330
End: 935847
Strand: Reverse
Name: 77465817
Synonym: RSP_1418
Alternate gene names: NA
Gene position: 935847-934330 (Counterclockwise)
Preceding gene: 77465818
Following gene: 77465812
Centisome position: 99.24
GC content: 69.76
Gene sequence:
>1518_bases ATGGGCACGTTCGACTTCCTCCTGCAGGGTCTCGCGGTCGCGCTCGATCCGATGATCCTGCTCTATGCGCTGGTGGGGGT CACGCTCGGCACGGCGGTGGGGGTGCTTCCGGGCATCGGCCCTGCGCTGACGGTGGCGCTCCTGCTGCCGGTCACCTACG GGCTCGATCCGGCGGGCTCGCTCATCATGTTCGCCGGGATCTATTACGGCGGCATGTATGGCGGCTCGACGACCTCGATC CTGCTCAACACGCCGGGCGAGAGCGCCTCGATCGTGACGGCGCTCGAGGGCAACAAGATGGCCCGCGCGGGCAGGGGAGG GCCTGCGCTCGCCACCGCCGCCATCGGCTCCTTCGTGGCGGGGCTTCTCGCGACCATCGCTTTGGCGCTGATCGCGCCCA CGGTGGTCAAGCTCGCGCTGGTCTTCGGGCCGCGGGAATATTTCGCGCTGATGGTGCTGGCCTTCGTCACCGTCTCGGCC GCCTTCGGCGACAGCACGCTCCGGGGGCTCACCTCGCTCTTCATCGGGCTCGCGCTGGCGGTGGTGGGCATCGACCAGCT GACCGGACAGGCGCGGCTCTCCTTCGGCGTGCCGCAGCTGCTCGACGGGATCGAGGTGACGACGCTCGCGGTGGCGCTCT TCGCGGTCGGCGAGGCGCTGTTCGTGGCGGGCCGCGGGATGCATCGGGACGGCGAGGCCGTCGCGGTGAAGGGCTCGCTC TGGATGACCGCGCAGGACTGGGCCCGATCCTGGAAGAGCTGGCTCCGCGGGACGGTGATCGGCTTTCCCATCGGCGCCAT GCCGGCGGGCGGGGCCGATATCGCGAGTTTCCTCTCCTACGCCACCGAGAAGCGCTTCTCGCGCCACCCCGAGGAGTTCG GCCACGGCGCCATCGAAGGCGTGGCGGGGCCCGAGGCCGCCAACAACGCTTCGGCCGCGGGCACGCTCGTGCCGCTCCTG ACGCTGGGCCTGCCCACGACGGCCACGGCCGCCATCATGCTCGCGGGCTTCCAGCAGTTCGGGCTTCAGCCCGGCCCGCT GCTGTTCGCCACCAATCCCCAGCTCGTCTGGGGGCTGATCGCGAGCCTTCTCATCGCCAACGTGATGCTTCTGGTGCTGA ACCTGCCGCTGATCGGGCTCTGGGTGCGGCTGCTGACCATCCCGAGGCCGTGGCTCTATGCGGGCATCCTGCTCTTCGCC ACGCTCGGCACGATCGGGGTCAATCCCTCGCCGGTCGAGCTGGGGATGCTTCTGGGCTTCGGCGTGCTGGGCTATCTCAT GCGGCTTTTCAGCTATCCCATCGCGCCGGTTGTGGTCGGGCTGATCCTCGGGCCCATGGCCGAGCAGCAGCTGCGCCGGG CGCTCGCCATCGCGCAGGGGGATGTCACGACGCTCATCGCCTCGCCCATCGCGGCCACTCTGTTGGTGCTCGCGGCGGCG GCGCTGATCGTGCCGATCCTCATGCGCCGCTACGGACGCGGCGACATCCTCGTGAAGATTGCGGCCGACGAGGACTGA
Upstream 100 bases:
>100_bases GGGCCTCATCTTCGCGCTGCTGGTCTATGGCCTCTTCGACGGGATCCTGTCGCTGAACCTGCCCTCGGGCCCGCCCGAGC GGCTGATCTACGGAGGCTGA
Downstream 100 bases:
>100_bases GCGCGCCACCCTGCCGGACGGGTCGCCCCTGCCGGATCCGGCCGGGGGCGACGCCGTGGCGGTCGGCGGTGGTCGCGGGA GTTCCCTCGGCGGGAGATCC
Product: TRAP-T family transporter large inner membrane subunit
Products: NA
Alternate protein names: ORFZ2 [H]
Number of amino acids: Translated: 505; Mature: 504
Protein sequence:
>505_residues MGTFDFLLQGLAVALDPMILLYALVGVTLGTAVGVLPGIGPALTVALLLPVTYGLDPAGSLIMFAGIYYGGMYGGSTTSI LLNTPGESASIVTALEGNKMARAGRGGPALATAAIGSFVAGLLATIALALIAPTVVKLALVFGPREYFALMVLAFVTVSA AFGDSTLRGLTSLFIGLALAVVGIDQLTGQARLSFGVPQLLDGIEVTTLAVALFAVGEALFVAGRGMHRDGEAVAVKGSL WMTAQDWARSWKSWLRGTVIGFPIGAMPAGGADIASFLSYATEKRFSRHPEEFGHGAIEGVAGPEAANNASAAGTLVPLL TLGLPTTATAAIMLAGFQQFGLQPGPLLFATNPQLVWGLIASLLIANVMLLVLNLPLIGLWVRLLTIPRPWLYAGILLFA TLGTIGVNPSPVELGMLLGFGVLGYLMRLFSYPIAPVVVGLILGPMAEQQLRRALAIAQGDVTTLIASPIAATLLVLAAA ALIVPILMRRYGRGDILVKIAADED
Sequences:
>Translated_505_residues MGTFDFLLQGLAVALDPMILLYALVGVTLGTAVGVLPGIGPALTVALLLPVTYGLDPAGSLIMFAGIYYGGMYGGSTTSI LLNTPGESASIVTALEGNKMARAGRGGPALATAAIGSFVAGLLATIALALIAPTVVKLALVFGPREYFALMVLAFVTVSA AFGDSTLRGLTSLFIGLALAVVGIDQLTGQARLSFGVPQLLDGIEVTTLAVALFAVGEALFVAGRGMHRDGEAVAVKGSL WMTAQDWARSWKSWLRGTVIGFPIGAMPAGGADIASFLSYATEKRFSRHPEEFGHGAIEGVAGPEAANNASAAGTLVPLL TLGLPTTATAAIMLAGFQQFGLQPGPLLFATNPQLVWGLIASLLIANVMLLVLNLPLIGLWVRLLTIPRPWLYAGILLFA TLGTIGVNPSPVELGMLLGFGVLGYLMRLFSYPIAPVVVGLILGPMAEQQLRRALAIAQGDVTTLIASPIAATLLVLAAA ALIVPILMRRYGRGDILVKIAADED >Mature_504_residues GTFDFLLQGLAVALDPMILLYALVGVTLGTAVGVLPGIGPALTVALLLPVTYGLDPAGSLIMFAGIYYGGMYGGSTTSIL LNTPGESASIVTALEGNKMARAGRGGPALATAAIGSFVAGLLATIALALIAPTVVKLALVFGPREYFALMVLAFVTVSAA FGDSTLRGLTSLFIGLALAVVGIDQLTGQARLSFGVPQLLDGIEVTTLAVALFAVGEALFVAGRGMHRDGEAVAVKGSLW MTAQDWARSWKSWLRGTVIGFPIGAMPAGGADIASFLSYATEKRFSRHPEEFGHGAIEGVAGPEAANNASAAGTLVPLLT LGLPTTATAAIMLAGFQQFGLQPGPLLFATNPQLVWGLIASLLIANVMLLVLNLPLIGLWVRLLTIPRPWLYAGILLFAT LGTIGVNPSPVELGMLLGFGVLGYLMRLFSYPIAPVVVGLILGPMAEQQLRRALAIAQGDVTTLIASPIAATLLVLAAAA LIVPILMRRYGRGDILVKIAADED
Specific function: Unknown
COG id: COG3333
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002823 [H]
Pfam domain/function: PF01970 DUF112 [H]
EC number: NA
Molecular weight: Translated: 52124; Mature: 51992
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTFDFLLQGLAVALDPMILLYALVGVTLGTAVGVLPGIGPALTVALLLPVTYGLDPAGS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCH LIMFAGIYYGGMYGGSTTSILLNTPGESASIVTALEGNKMARAGRGGPALATAAIGSFVA HHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEEECCCCHHCCCCCCCHHHHHHHHHHHH GLLATIALALIAPTVVKLALVFGPREYFALMVLAFVTVSAAFGDSTLRGLTSLFIGLALA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH VVGIDQLTGQARLSFGVPQLLDGIEVTTLAVALFAVGEALFVAGRGMHRDGEAVAVKGSL HHHHHHHCCCHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCE WMTAQDWARSWKSWLRGTVIGFPIGAMPAGGADIASFLSYATEKRFSRHPEEFGHGAIEG EEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCC VAGPEAANNASAAGTLVPLLTLGLPTTATAAIMLAGFQQFGLQPGPLLFATNPQLVWGLI CCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHH ASLLIANVMLLVLNLPLIGLWVRLLTIPRPWLYAGILLFATLGTIGVNPSPVELGMLLGF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH GVLGYLMRLFSYPIAPVVVGLILGPMAEQQLRRALAIAQGDVTTLIASPIAATLLVLAAA HHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH ALIVPILMRRYGRGDILVKIAADED HHHHHHHHHHCCCCCEEEEEECCCC >Mature Secondary Structure GTFDFLLQGLAVALDPMILLYALVGVTLGTAVGVLPGIGPALTVALLLPVTYGLDPAGS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCH LIMFAGIYYGGMYGGSTTSILLNTPGESASIVTALEGNKMARAGRGGPALATAAIGSFVA HHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEEECCCCHHCCCCCCCHHHHHHHHHHHH GLLATIALALIAPTVVKLALVFGPREYFALMVLAFVTVSAAFGDSTLRGLTSLFIGLALA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH VVGIDQLTGQARLSFGVPQLLDGIEVTTLAVALFAVGEALFVAGRGMHRDGEAVAVKGSL HHHHHHHCCCHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCE WMTAQDWARSWKSWLRGTVIGFPIGAMPAGGADIASFLSYATEKRFSRHPEEFGHGAIEG EEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCC VAGPEAANNASAAGTLVPLLTLGLPTTATAAIMLAGFQQFGLQPGPLLFATNPQLVWGLI CCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHH ASLLIANVMLLVLNLPLIGLWVRLLTIPRPWLYAGILLFATLGTIGVNPSPVELGMLLGF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH GVLGYLMRLFSYPIAPVVVGLILGPMAEQQLRRALAIAQGDVTTLIASPIAATLLVLAAA HHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH ALIVPILMRRYGRGDILVKIAADED HHHHHHHHHHCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]