Definition | Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence. |
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Accession | NC_007494 |
Length | 943,016 |
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The map label for this gene is bcsP31 [H]
Identifier: 77465812
GI number: 77465812
Start: 929652
End: 930626
Strand: Reverse
Name: bcsP31 [H]
Synonym: RSP_1413
Alternate gene names: 77465812
Gene position: 930626-929652 (Counterclockwise)
Preceding gene: 77465817
Following gene: 77465811
Centisome position: 98.69
GC content: 66.87
Gene sequence:
>975_bases ATGAGAACAGGGAAACCTGCTCTGGCGGGCGCGCTTGCGGGAGCGCTGGCCATACTGGCGGCGCCGGCCCTCGCTCAGGA CAATTTCATTTCCATCGGCACGGGTGCCGTGACCGGCGTCTACTATCCCACGGGCGGCGCGATCTGCCGGATGATGTCGC GCAACCGCGCCGAGCACGGGATCCGCTGCGCCGTCGAAAGCACCGGGGGCTCGGTCTACAACGTCAACGCCGTGCGCTCG GGCGAGCTCGACTTCGGCGTGGCCCAGTCGGACGTGCAGTACAAGGCCTACGAGGGCGAGGGCACCTTCGCCGATCAGGG CGCCTATCCTGAGCTGCGCTCGGTCTTCTCGCTGCATCCCGAGCCCTTCACCGTGGTGGCCCGCGCCGATGCCGGGATCG CCAACTTCGAGGATCTGAAGGGCAAGCGCGTGAACGTGGGCAACCCGGGCTCGGGCCAGCGCGACACGATGGAAGTGCTG ATGAAGGAACTCGGCTGGACGATGGGCGACTTCACCCTGACCTCCGAGCTGCAGGCCGGCGAACAGAGCCAGGCGCTCTG CGACAACAACATCGACGCGATGGTCTATACCGTGGGTCACCCGTCGGGCTCGATCCAGGAAGCCACCACCGCCTGCGACG CGGTGCTGGTCAATGTCGCGGGCGAGGCCGTCGACAAGCTGGTGGAGGCGAACCCCTACTACCGCAAGGCCACCATTCCG GGCGGCATGTATCGCGGCAATGCCGAACCCACCCAGACCTTCGGCGTGGGCGCGACGCTCGTGACCTCGGCCAACACGCC GGACGACGTGGTCTATGCGCTGGTCAAGGCGGTCTTCTCCGACATCGACCAGTTCCGCAGCCTGCACCCGGCCTTCGCCG AGCTCGAACCGTCGGAGATGGTGAGCGACGGCCTTTCGGCGCCTCTGCATCCGGGCGCGGAGAAGTATTTCCGCGAGGCC GGCCTCATCAAGTGA
Upstream 100 bases:
>100_bases AAGGTCCTCCGGCAAGACAATTCAATTGCATTGTCGTTGGTCGGGAAATATCACAAATGCATTACCCATCCGAGGCCAAG ACCAACAGGAGGAACGAAAC
Downstream 100 bases:
>100_bases TCCTGCGCCCCTGACGGGGCGGGATCTCCGGGCCGCCGTAAGCTGTCGCTGCGGCGGCCCTTCGCGCAGGAGGGACGCAT GACAGACGAGACCCAGCCGA
Product: TRAP-T family transporter periplasmic binding component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MRTGKPALAGALAGALAILAAPALAQDNFISIGTGAVTGVYYPTGGAICRMMSRNRAEHGIRCAVESTGGSVYNVNAVRS GELDFGVAQSDVQYKAYEGEGTFADQGAYPELRSVFSLHPEPFTVVARADAGIANFEDLKGKRVNVGNPGSGQRDTMEVL MKELGWTMGDFTLTSELQAGEQSQALCDNNIDAMVYTVGHPSGSIQEATTACDAVLVNVAGEAVDKLVEANPYYRKATIP GGMYRGNAEPTQTFGVGATLVTSANTPDDVVYALVKAVFSDIDQFRSLHPAFAELEPSEMVSDGLSAPLHPGAEKYFREA GLIK
Sequences:
>Translated_324_residues MRTGKPALAGALAGALAILAAPALAQDNFISIGTGAVTGVYYPTGGAICRMMSRNRAEHGIRCAVESTGGSVYNVNAVRS GELDFGVAQSDVQYKAYEGEGTFADQGAYPELRSVFSLHPEPFTVVARADAGIANFEDLKGKRVNVGNPGSGQRDTMEVL MKELGWTMGDFTLTSELQAGEQSQALCDNNIDAMVYTVGHPSGSIQEATTACDAVLVNVAGEAVDKLVEANPYYRKATIP GGMYRGNAEPTQTFGVGATLVTSANTPDDVVYALVKAVFSDIDQFRSLHPAFAELEPSEMVSDGLSAPLHPGAEKYFREA GLIK >Mature_324_residues MRTGKPALAGALAGALAILAAPALAQDNFISIGTGAVTGVYYPTGGAICRMMSRNRAEHGIRCAVESTGGSVYNVNAVRS GELDFGVAQSDVQYKAYEGEGTFADQGAYPELRSVFSLHPEPFTVVARADAGIANFEDLKGKRVNVGNPGSGQRDTMEVL MKELGWTMGDFTLTSELQAGEQSQALCDNNIDAMVYTVGHPSGSIQEATTACDAVLVNVAGEAVDKLVEANPYYRKATIP GGMYRGNAEPTQTFGVGATLVTSANTPDDVVYALVKAVFSDIDQFRSLHPAFAELEPSEMVSDGLSAPLHPGAEKYFREA GLIK
Specific function: Unknown
COG id: COG2358
COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015168 - InterPro: IPR011852 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 34144; Mature: 34144
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTGKPALAGALAGALAILAAPALAQDNFISIGTGAVTGVYYPTGGAICRMMSRNRAEHG CCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEECCCHHHHHHHHHCCCCCC IRCAVESTGGSVYNVNAVRSGELDFGVAQSDVQYKAYEGEGTFADQGAYPELRSVFSLHP CEEEEECCCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCC EPFTVVARADAGIANFEDLKGKRVNVGNPGSGQRDTMEVLMKELGWTMGDFTLTSELQAG CCEEEEEECCCCCCCHHHCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEHHHHCC EQSQALCDNNIDAMVYTVGHPSGSIQEATTACDAVLVNVAGEAVDKLVEANPYYRKATIP CHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC GGMYRGNAEPTQTFGVGATLVTSANTPDDVVYALVKAVFSDIDQFRSLHPAFAELEPSEM CCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHH VSDGLSAPLHPGAEKYFREAGLIK HHHCCCCCCCCCHHHHHHHHCCCC >Mature Secondary Structure MRTGKPALAGALAGALAILAAPALAQDNFISIGTGAVTGVYYPTGGAICRMMSRNRAEHG CCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEECCCHHHHHHHHHCCCCCC IRCAVESTGGSVYNVNAVRSGELDFGVAQSDVQYKAYEGEGTFADQGAYPELRSVFSLHP CEEEEECCCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCC EPFTVVARADAGIANFEDLKGKRVNVGNPGSGQRDTMEVLMKELGWTMGDFTLTSELQAG CCEEEEEECCCCCCCHHHCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEHHHHCC EQSQALCDNNIDAMVYTVGHPSGSIQEATTACDAVLVNVAGEAVDKLVEANPYYRKATIP CHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC GGMYRGNAEPTQTFGVGATLVTSANTPDDVVYALVKAVFSDIDQFRSLHPAFAELEPSEM CCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHH VSDGLSAPLHPGAEKYFREAGLIK HHHCCCCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3133283 [H]