Click here to switch to the map view.

The map label for this gene is 77465490

Identifier: 77465490

GI number: 77465490

Start: 562063

End: 564366

Strand: Reverse

Name: 77465490

Synonym: RSP_3489

Alternate gene names: NA

Gene position: 564366-562063 (Counterclockwise)

Preceding gene: 77465491

Following gene: 77465475

Centisome position: 59.85

GC content: 69.31

Gene sequence:

>2304_bases
ATGTCCGAGGCCCGCGAAATCACCCTGTCCCTTCCCGCCGCGACCGAGGATCTGTGGTTCTCGGCGCTCGAGGGCGAGGA
CGGGCTGGGGCGCCCGTTCCGCTACGAGCTGCTCCTCGCCAGCAAGTCGCTCGATCTCGGCGCGGCCGACATCCTCGGCA
CGCCGGTGCTGGTGACGGTGCGGGGCGAGGTGCCGCGCCATTTCCACGGCATTGCCACCGCCTTCGGGCTGGACGAGATC
CGCGACGACCATGCCCATTACCGGCTGACGATGGAGCCCTCCATGGCGCTCCTCGGCCTGCGGCGCGACAACCGGATCTT
CCAGGACCGCTCGGTGCCCGAGATCCTCGAGGCCGTCCTGGGGGAGATCCCCGGCCTCGACTGGGATTTCAGGCTGCAGG
CCAGCTATCCGCCGCGCGACTACTGCGTGCAGTATGGCGAAACCGATCTCGATTTCGTGCAGCGGCTGATGGAGCATGAG
GGGATCGGCTATTTCTTCGAGCATGAGGCAGAGGGCCACAGGCTCGTCCTCTTCGACACGAATGCCCGGCTCGCGCCCGC
GCCGGGGGCCGAGATCCTGCCCTACGAGCCCGACAGCCGGGTGAGCTTCCGCGACGGCGACTTCATCACCGCCTGGCTGC
CCCGGGCGCATATCCGGCCGGGAAAGGTCTCGCAGGGCGACTACGATTTCGAGAAGCCCTCGTCGGACCTGACGAGCCGC
GCCGAAAATCCGCTCGGCCATGCGGCCGACGGTGCCGAGCACTATCGCTGGCCCGGGGATTACCGCACCCTCCCCGCGGG
CGACCGGCTGTCCCGGCTCCGGCTGGAGGAGGCGCAGGCGCCGCAGGTGCGCATCGAGGCCCGCGGCACCGCGCGGCCGC
TCTGGCCGGGCCGGATCTTCCGGCTCGATCTCTTCCCGCGCGAGGCGGAGAACGACGACTATCTCGTCACCGCCTGCCGC
TACCGGCTCTGGGACGATCAGTTCCGCTCGGGTCAGTCGCGCGCCGAGGTGGGCTACGAGGTGGATCTGTCGCTCGTCCC
CGCCCGCGTCCCCTACCGGCCCGAGCGGCGCACCCCGCGCCCGGTGATGAAGGGGCCGCAGACCGCCCTCGTGGTCGGGC
CCGCGGGCGCGGAGATCTTCACCGACAGATATGCGCGGGTGAAGGTGCATTTCTTCTGGGACCGGCTCGACGCCCGCAAC
GAGGCCTCCTCCTGCTTCGTCCGCGTGAGCCAGACCTGGGCCGGGGCCGGCTGGGGGTTTATCCAGATCCCCCGGATCGG
GCAGGAGGTCATCGTCGATTTCATCGAGGGCGATCCCGACCGCCCCATCGTCACGGGCCGGGTCTACAATGCCGAGCAGA
TGCCGCCCTACGGCCTGCCGGGCCAGGCCACCCAGTCGGGCTGGAAGTCGCACTCCTCGCCCGGAGGCGGCGGCTGGAAC
GAGCTGCGCTTCGAGGACAAGGCGGGTGCGGAGGAGGTCTATTTCCAGGCGCAGAAGGACCATACCGAGCTCATCAAGAA
CGACGAGAGCCGCACCATCGGCCATGATTTCGCCGAGGATGTGGGCCATGACGCCGTGCAGTCCGTGGCGCACGACCGCA
GGGAGAGCGTGGGCAACGACAAGGACACGAGCGTGGGCCGGAACCGCACCGTCTCGATCGGCGTCGACGACAGCGAGAGC
GTGGGCGCGAACCGCGCGCTGCGGGTCGGCGCGGACGAGACGATCGCGGTGGCGCGGAATGCGACCGAGACCATCGGCAT
GAACCACACCCAGACGGTCGGCATCGCCCAGACGGTGACGGTCGGGGCGGCGCGCACCGACAGTGTCGGCGGGGCCGAGA
CACGCTCGGTCGGCGCGGTCCAGACCAACACCATCGCCGCAAGCCGCAGCGTCTCGGTAGGCGCGGGTCAGACCCATTCG
GTGGGCGCCGACGACGGCTGGACCGTGGGCGGGTCGCAGACCGTCTCGGTCGGCGCGGACCAGTCGGTGACGGTGGGGGC
GAAACAGACGGTCAGCACCGGCTCGGATCAGGTGACCACCGTCGGCGGCTCCCGCGCCACGCAGGTGGCCAAGGACGACC
TGCAGAAGGCCGACGGCGCCATGGGCATCGGCGTGGGCAAGAGCTACACGCTCGACGTCAAGGACGAGATCACCCTGAAA
TGCGGCTCGGCCGAGATCACGCTGAAGAAGGACGGCACCATCGTCCTCAAGGGCAAGGACATCACGCTGGACGCCTCGGG
CAAGATCAACCTCAAGGCCGGCGGCGAGATCACCGGCAAGGGCTCGAAGATCAACCTGAACTGA

Upstream 100 bases:

>100_bases
CTCGAAGCCGCCTTCGACGCGGCGCCGAACCCGCTCTCGGTGCGACGACTCGTGCGCGGGCTCGCCTGTCCGCAGGTCCT
GTGAAACGAAGGGAAAGCCC

Downstream 100 bases:

>100_bases
CGGTGCCGGTCAGCCGGTTCCGAGGAGCCTCCCGAGGGCCTCCGCCGGGTCGCGGGGATCGCAGGCGGCGCTGGCCTTAC
CCGTCCAGAGAAGGAGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; VgrG Protein; Rhs-Family Protein; Rhs Family Protein; Rhs Element Vgr Family Protein; Rhs Accessory Genetic Element; RHS Accessory Genetic Element; Vgr Protein; VgrG Family T6SS G; Conserved Hypothethical Protein; Rhs Element Vgr Family; Vgr-Related Protein; Rhs Element Vgr ProteinGp5-Like; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Rhs Element Protein; Type VI Secretion System Effector Protein VgrS; VrgG Protein; Rhs Protein; Rhs/Vgr-Family Protein; Vgr Family Type VI Secretion System

Number of amino acids: Translated: 767; Mature: 766

Protein sequence:

>767_residues
MSEAREITLSLPAATEDLWFSALEGEDGLGRPFRYELLLASKSLDLGAADILGTPVLVTVRGEVPRHFHGIATAFGLDEI
RDDHAHYRLTMEPSMALLGLRRDNRIFQDRSVPEILEAVLGEIPGLDWDFRLQASYPPRDYCVQYGETDLDFVQRLMEHE
GIGYFFEHEAEGHRLVLFDTNARLAPAPGAEILPYEPDSRVSFRDGDFITAWLPRAHIRPGKVSQGDYDFEKPSSDLTSR
AENPLGHAADGAEHYRWPGDYRTLPAGDRLSRLRLEEAQAPQVRIEARGTARPLWPGRIFRLDLFPREAENDDYLVTACR
YRLWDDQFRSGQSRAEVGYEVDLSLVPARVPYRPERRTPRPVMKGPQTALVVGPAGAEIFTDRYARVKVHFFWDRLDARN
EASSCFVRVSQTWAGAGWGFIQIPRIGQEVIVDFIEGDPDRPIVTGRVYNAEQMPPYGLPGQATQSGWKSHSSPGGGGWN
ELRFEDKAGAEEVYFQAQKDHTELIKNDESRTIGHDFAEDVGHDAVQSVAHDRRESVGNDKDTSVGRNRTVSIGVDDSES
VGANRALRVGADETIAVARNATETIGMNHTQTVGIAQTVTVGAARTDSVGGAETRSVGAVQTNTIAASRSVSVGAGQTHS
VGADDGWTVGGSQTVSVGADQSVTVGAKQTVSTGSDQVTTVGGSRATQVAKDDLQKADGAMGIGVGKSYTLDVKDEITLK
CGSAEITLKKDGTIVLKGKDITLDASGKINLKAGGEITGKGSKINLN

Sequences:

>Translated_767_residues
MSEAREITLSLPAATEDLWFSALEGEDGLGRPFRYELLLASKSLDLGAADILGTPVLVTVRGEVPRHFHGIATAFGLDEI
RDDHAHYRLTMEPSMALLGLRRDNRIFQDRSVPEILEAVLGEIPGLDWDFRLQASYPPRDYCVQYGETDLDFVQRLMEHE
GIGYFFEHEAEGHRLVLFDTNARLAPAPGAEILPYEPDSRVSFRDGDFITAWLPRAHIRPGKVSQGDYDFEKPSSDLTSR
AENPLGHAADGAEHYRWPGDYRTLPAGDRLSRLRLEEAQAPQVRIEARGTARPLWPGRIFRLDLFPREAENDDYLVTACR
YRLWDDQFRSGQSRAEVGYEVDLSLVPARVPYRPERRTPRPVMKGPQTALVVGPAGAEIFTDRYARVKVHFFWDRLDARN
EASSCFVRVSQTWAGAGWGFIQIPRIGQEVIVDFIEGDPDRPIVTGRVYNAEQMPPYGLPGQATQSGWKSHSSPGGGGWN
ELRFEDKAGAEEVYFQAQKDHTELIKNDESRTIGHDFAEDVGHDAVQSVAHDRRESVGNDKDTSVGRNRTVSIGVDDSES
VGANRALRVGADETIAVARNATETIGMNHTQTVGIAQTVTVGAARTDSVGGAETRSVGAVQTNTIAASRSVSVGAGQTHS
VGADDGWTVGGSQTVSVGADQSVTVGAKQTVSTGSDQVTTVGGSRATQVAKDDLQKADGAMGIGVGKSYTLDVKDEITLK
CGSAEITLKKDGTIVLKGKDITLDASGKINLKAGGEITGKGSKINLN
>Mature_766_residues
SEAREITLSLPAATEDLWFSALEGEDGLGRPFRYELLLASKSLDLGAADILGTPVLVTVRGEVPRHFHGIATAFGLDEIR
DDHAHYRLTMEPSMALLGLRRDNRIFQDRSVPEILEAVLGEIPGLDWDFRLQASYPPRDYCVQYGETDLDFVQRLMEHEG
IGYFFEHEAEGHRLVLFDTNARLAPAPGAEILPYEPDSRVSFRDGDFITAWLPRAHIRPGKVSQGDYDFEKPSSDLTSRA
ENPLGHAADGAEHYRWPGDYRTLPAGDRLSRLRLEEAQAPQVRIEARGTARPLWPGRIFRLDLFPREAENDDYLVTACRY
RLWDDQFRSGQSRAEVGYEVDLSLVPARVPYRPERRTPRPVMKGPQTALVVGPAGAEIFTDRYARVKVHFFWDRLDARNE
ASSCFVRVSQTWAGAGWGFIQIPRIGQEVIVDFIEGDPDRPIVTGRVYNAEQMPPYGLPGQATQSGWKSHSSPGGGGWNE
LRFEDKAGAEEVYFQAQKDHTELIKNDESRTIGHDFAEDVGHDAVQSVAHDRRESVGNDKDTSVGRNRTVSIGVDDSESV
GANRALRVGADETIAVARNATETIGMNHTQTVGIAQTVTVGAARTDSVGGAETRSVGAVQTNTIAASRSVSVGAGQTHSV
GADDGWTVGGSQTVSVGADQSVTVGAKQTVSTGSDQVTTVGGSRATQVAKDDLQKADGAMGIGVGKSYTLDVKDEITLKC
GSAEITLKKDGTIVLKGKDITLDASGKINLKAGGEITGKGSKINLN

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI310114873, Length=173, Percent_Identity=30.0578034682081, Blast_Score=67, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 83597; Mature: 83466

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEAREITLSLPAATEDLWFSALEGEDGLGRPFRYELLLASKSLDLGAADILGTPVLVTV
CCCCEEEEEECCCCCHHHEEEEECCCCCCCCCEEEEEEEEECCCCCCCHHHCCCCEEEEE
RGEVPRHFHGIATAFGLDEIRDDHAHYRLTMEPSMALLGLRRDNRIFQDRSVPEILEAVL
ECCCCHHHHHHHHHHCHHHHCCCCCEEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHH
GEIPGLDWDFRLQASYPPRDYCVQYGETDLDFVQRLMEHEGIGYFFEHEAEGHRLVLFDT
HHCCCCCEEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEEC
NARLAPAPGAEILPYEPDSRVSFRDGDFITAWLPRAHIRPGKVSQGDYDFEKPSSDLTSR
CCEECCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHH
AENPLGHAADGAEHYRWPGDYRTLPAGDRLSRLRLEEAQAPQVRIEARGTARPLWPGRIF
HCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEE
RLDLFPREAENDDYLVTACRYRLWDDQFRSGQSRAEVGYEVDLSLVPARVPYRPERRTPR
EEEECCCCCCCCCEEEEEEEHHHCCHHHHCCCCHHCCCEEEEEEEECCCCCCCCCCCCCC
PVMKGPQTALVVGPAGAEIFTDRYARVKVHFFWDRLDARNEASSCFVRVSQTWAGAGWGF
HHHCCCCEEEEECCCCCHHHCCCEEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCE
IQIPRIGQEVIVDFIEGDPDRPIVTGRVYNAEQMPPYGLPGQATQSGWKSHSSPGGGGWN
EECCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC
ELRFEDKAGAEEVYFQAQKDHTELIKNDESRTIGHDFAEDVGHDAVQSVAHDRRESVGND
CEEECCCCCCCCEEEEECCCHHHHHCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHCCCC
KDTSVGRNRTVSIGVDDSESVGANRALRVGADETIAVARNATETIGMNHTQTVGIAQTVT
CCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCEEEEECCCHHHCCCCCCEEECEEEEEE
VGAARTDSVGGAETRSVGAVQTNTIAASRSVSVGAGQTHSVGADDGWTVGGSQTVSVGAD
ECCCCCCCCCCCCCCCCCCEEECEEEECCEEEECCCCCCCCCCCCCEECCCCEEEEECCC
QSVTVGAKQTVSTGSDQVTTVGGSRATQVAKDDLQKADGAMGIGVGKSYTLDVKDEITLK
CEEEECCCHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEECCCCEEEEECCCCEEEE
CGSAEITLKKDGTIVLKGKDITLDASGKINLKAGGEITGKGSKINLN
ECCEEEEEECCCEEEEECCEEEEECCCEEEEEECCEEECCCCEEECC
>Mature Secondary Structure 
SEAREITLSLPAATEDLWFSALEGEDGLGRPFRYELLLASKSLDLGAADILGTPVLVTV
CCCEEEEEECCCCCHHHEEEEECCCCCCCCCEEEEEEEEECCCCCCCHHHCCCCEEEEE
RGEVPRHFHGIATAFGLDEIRDDHAHYRLTMEPSMALLGLRRDNRIFQDRSVPEILEAVL
ECCCCHHHHHHHHHHCHHHHCCCCCEEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHH
GEIPGLDWDFRLQASYPPRDYCVQYGETDLDFVQRLMEHEGIGYFFEHEAEGHRLVLFDT
HHCCCCCEEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEEC
NARLAPAPGAEILPYEPDSRVSFRDGDFITAWLPRAHIRPGKVSQGDYDFEKPSSDLTSR
CCEECCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHH
AENPLGHAADGAEHYRWPGDYRTLPAGDRLSRLRLEEAQAPQVRIEARGTARPLWPGRIF
HCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEE
RLDLFPREAENDDYLVTACRYRLWDDQFRSGQSRAEVGYEVDLSLVPARVPYRPERRTPR
EEEECCCCCCCCCEEEEEEEHHHCCHHHHCCCCHHCCCEEEEEEEECCCCCCCCCCCCCC
PVMKGPQTALVVGPAGAEIFTDRYARVKVHFFWDRLDARNEASSCFVRVSQTWAGAGWGF
HHHCCCCEEEEECCCCCHHHCCCEEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCE
IQIPRIGQEVIVDFIEGDPDRPIVTGRVYNAEQMPPYGLPGQATQSGWKSHSSPGGGGWN
EECCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC
ELRFEDKAGAEEVYFQAQKDHTELIKNDESRTIGHDFAEDVGHDAVQSVAHDRRESVGND
CEEECCCCCCCCEEEEECCCHHHHHCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHCCCC
KDTSVGRNRTVSIGVDDSESVGANRALRVGADETIAVARNATETIGMNHTQTVGIAQTVT
CCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCEEEEECCCHHHCCCCCCEEECEEEEEE
VGAARTDSVGGAETRSVGAVQTNTIAASRSVSVGAGQTHSVGADDGWTVGGSQTVSVGAD
ECCCCCCCCCCCCCCCCCCEEECEEEECCEEEECCCCCCCCCCCCCEECCCCEEEEECCC
QSVTVGAKQTVSTGSDQVTTVGGSRATQVAKDDLQKADGAMGIGVGKSYTLDVKDEITLK
CEEEECCCHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEECCCCEEEEECCCCEEEE
CGSAEITLKKDGTIVLKGKDITLDASGKINLKAGGEITGKGSKINLN
ECCEEEEEECCCEEEEECCEEEEECCCEEEEEECCEEECCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA