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The map label for this gene is clpV1 [H]

Identifier: 77465475

GI number: 77465475

Start: 541487

End: 544156

Strand: Reverse

Name: clpV1 [H]

Synonym: RSP_3474

Alternate gene names: 77465475

Gene position: 544156-541487 (Counterclockwise)

Preceding gene: 77465490

Following gene: 77465474

Centisome position: 57.7

GC content: 70.94

Gene sequence:

>2670_bases
ATGCCGCGGGGCTCGCAGGAAACCGTCAAGCGGAAGGAACTGGTGGCGAAGCTGAACCCGACCTGTCTCGCGGCCTTCTC
GGCGGCGGCTCAGGCGGCGAAGGCACGCGGCAACCCCTATGTCGAGCTGGTCCATCTGATCGAGGCGCTGCTCGCCGCGG
ATCGGTCCGACATGGCGCTGCTGATGCGCGCGGCAGGCTGCGATGCCGGCCGGCTCTCGGCCGATGTGGCCCGCGCGGTG
GATGCGCTGCCGCGCGGGGCGAGCGCGGTGGAAGAATTTTCCGACCATCTCTTCCACGCCATCCGCGAGGGCTGGACCTT
CGGCAGCCTGCGGTTCGGCGACGACCGCGTGCGCTCGGGATACCTCCTGCTCGGCGCGCTGCGGGTGCCCGTGCTCGAGG
CGCTGCTCATGCGGATCAGCGGCGCCTTCGGGCAGGTGGATGCGGAGTCTCTTTCCGAGACGTTCCGCGATCTGACGCAG
GGCTCGGCCGAGGGCGATGCCGCGCCGCCCCCCGCGCGGCCGGGCGCGGCCGACGGCTCCGCGCTCGCCCGCTATGCGAC
CGATCTGACGGCGCGGGCGCGGGAGGGGCGGCTCGATCCGGTCGTGGGGCGCGATCCCGAGATCCGGCAGATCATCGACA
TCCTGATGCGGCGGAGGCAGAACAATCCGATCCTCACCGGCGAGGCCGGGGTGGGCAAGACCGCCGTCGTCGAGGGCCTT
GCGCTGCGGCTTGCCCGAGGGGACGTGCCGCCGCCGCTGCGCCCGGTGACCCTGTGGATGCTCGATCTCGGGCTGATGCA
GGCGGGTGCCAGCATGAAGGGCGAGTTCGAGAAGCGGCTGAAGAGCGTGATCGACGAGGTTCACGCCTCGGACGCCCCGG
TGATCCTCTTCATCGACGAGGCCCATACGCTGATCGGCGCGGGCGGCGCGGCGGGGACGGGGGACGCGGCCAATCTTCTC
AAACCGGCACTGGCACGGGGAGAGCTGCGCACCATCGCCGCCACCACCTGGGCCGAATACAAGCAGCATATCGAGCCCGA
CCCGGCGCTGACCCGCCGCTTTCAGGTTGTGCGGATCGAGGAGCCCTCGGAAGAGGCCGCGATCCGCATGTGCCGCGGCG
TGGCCGCCGTGCTGGAGCGCCATCACCGGGTCGAGATCCTCGACGAGGCGGTGGGGGCGGCGGTGCGGTTGTCGCAGCGC
TACCTGCCGGCCAGGCAATTGCCGGACAAGGCGATTTCCCTGCTCGACACCGCCTGCGCGCGCGTCGCCGTCTCTCAGCA
TGCGACGCCGGCGGAGGTCGAGGACATCGACCGCCGCGCGCAGGCGCTCGCGCTCGAGGCGGGCATCCTCGAGCGCGAGG
AGGCCGTGGGCATGGATGTGACGGCGCGCCGCGGCGAGGTCGAGGCGGCGCGGACCGCCGTCGCGGCCGACCGTGCCGCG
GCGGAGGCGCGGTGGGAGGCCGAGAAGGCGCTGGTGGCCGAAATTCTTGAACTGCGCGCCCGGCTGCGGGCAGAGGGCGA
TGCGCTGGACGGCACCGCGGCGCAGGCCGCCGAGGAGGCCGAGCCGCCCAAGGACGACCGTGCGGCGCTTCTCGACCGGC
TGCGGCGTTGCAGCCGGGATCTCGCCGAGGCGCAGGGGGAGCGGCCGCTGATCCTGCCGACGGTCGACCGACAGGCGGTC
GCCTCGGTGGTGCAGGACTGGACCGGCATCCCGATGGGGCGGATGCTGGCCAGCCGCAACGAACGCGCGCTCGGCCTTGC
GGACCTGCTGGCCCGGCGCGTCGTGGGACAGGATCATGCGATGGAGGCCATCGCGAGCCGGATCCAGACCGCGCAGGCGG
GGCTCGGCCCGCCGGAGAAGCCGCTCGGCGTGTTTCTGCTCTGCGGGCCCTCGGGCGTGGGCAAGACCGAGACGGCGCTG
GCCTTGGCCGAACAGCTGCACGGTGGCGAGCAGGCTCTCATCACGATCAACATGAGCGAATTTCAGGAGGCGCATACGGT
CTCGACGCTGAAGGGATCGCCCCCGGGCTATGTGGGCTATGGCAAGGGCGGCATCCTGACCGAGGCGGTGCGGCGAAAAC
CCTATTCGGTGATCCTGCTCGACGAGGTCGAGAAGGCGCATCCCGATGTCCATGAAATATTCTTTCAGGTGTTCGACAAG
GGAAGGATGGACGACAGCGAAGGGCGGCAGATCGATTTCCGCAATACGGTGATCCTGCTGACCTCGAACGTCGGCACCGA
CGAGATCGTGGAGGCGGCGGGGCAGGATCTGGCCCGGGTCTCGGCCACGCTCCGCGCGCCGCTTCTGCAGGTCTTTCCGG
CCGCGCTGCTGGGGCGGATGATCGTGCTGCCGTTCCTGCCGCTCTCGGACCGGATGATCGCGGCCATCGCGGGGCAGAAG
CTCGAGGCCATTGCCCGGCGGCTGAAGGCGGGGCACGGCGCCGAGCTGGTTCTGGGCGAGGGCGTGCTCGAGACGATCCG
CGCCCGCTGCACCGAGGTCGAGTCGGGGGGGCGGATGATCGACGCGATCCTGAGCGGCACCCTGCTGCCGGAGCTGAGCC
GCAAGCTTCTCGAGCGCCAGCTCGCGGGGGCGGCCTTCAGCCGGGTGACCCTCACCGGCGGCCCCGCAGGCTTTTCCTAT
GCGTTCGAGACGGAGGCGGATCATGCATGA

Upstream 100 bases:

>100_bases
CCCGATGCAAAGGTGTCGCCAAGGTGCCTGATTCCAGCATAGGCTAAGCCAAGACCTTTGCGCCCGACTATTTTCAGGAC
GACATCGTGAGGGGCCGGCC

Downstream 100 bases:

>100_bases
CGGTGGCTTTGCCGCGGCGGGCTCGCGCCTGCTGCGGGGCCGGATCCTCGGGATCGATCCCTGCGGGCTCCTGCGGGTGG
AGATCGGCGGGGCGGAAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 889; Mature: 888

Protein sequence:

>889_residues
MPRGSQETVKRKELVAKLNPTCLAAFSAAAQAAKARGNPYVELVHLIEALLAADRSDMALLMRAAGCDAGRLSADVARAV
DALPRGASAVEEFSDHLFHAIREGWTFGSLRFGDDRVRSGYLLLGALRVPVLEALLMRISGAFGQVDAESLSETFRDLTQ
GSAEGDAAPPPARPGAADGSALARYATDLTARAREGRLDPVVGRDPEIRQIIDILMRRRQNNPILTGEAGVGKTAVVEGL
ALRLARGDVPPPLRPVTLWMLDLGLMQAGASMKGEFEKRLKSVIDEVHASDAPVILFIDEAHTLIGAGGAAGTGDAANLL
KPALARGELRTIAATTWAEYKQHIEPDPALTRRFQVVRIEEPSEEAAIRMCRGVAAVLERHHRVEILDEAVGAAVRLSQR
YLPARQLPDKAISLLDTACARVAVSQHATPAEVEDIDRRAQALALEAGILEREEAVGMDVTARRGEVEAARTAVAADRAA
AEARWEAEKALVAEILELRARLRAEGDALDGTAAQAAEEAEPPKDDRAALLDRLRRCSRDLAEAQGERPLILPTVDRQAV
ASVVQDWTGIPMGRMLASRNERALGLADLLARRVVGQDHAMEAIASRIQTAQAGLGPPEKPLGVFLLCGPSGVGKTETAL
ALAEQLHGGEQALITINMSEFQEAHTVSTLKGSPPGYVGYGKGGILTEAVRRKPYSVILLDEVEKAHPDVHEIFFQVFDK
GRMDDSEGRQIDFRNTVILLTSNVGTDEIVEAAGQDLARVSATLRAPLLQVFPAALLGRMIVLPFLPLSDRMIAAIAGQK
LEAIARRLKAGHGAELVLGEGVLETIRARCTEVESGGRMIDAILSGTLLPELSRKLLERQLAGAAFSRVTLTGGPAGFSY
AFETEADHA

Sequences:

>Translated_889_residues
MPRGSQETVKRKELVAKLNPTCLAAFSAAAQAAKARGNPYVELVHLIEALLAADRSDMALLMRAAGCDAGRLSADVARAV
DALPRGASAVEEFSDHLFHAIREGWTFGSLRFGDDRVRSGYLLLGALRVPVLEALLMRISGAFGQVDAESLSETFRDLTQ
GSAEGDAAPPPARPGAADGSALARYATDLTARAREGRLDPVVGRDPEIRQIIDILMRRRQNNPILTGEAGVGKTAVVEGL
ALRLARGDVPPPLRPVTLWMLDLGLMQAGASMKGEFEKRLKSVIDEVHASDAPVILFIDEAHTLIGAGGAAGTGDAANLL
KPALARGELRTIAATTWAEYKQHIEPDPALTRRFQVVRIEEPSEEAAIRMCRGVAAVLERHHRVEILDEAVGAAVRLSQR
YLPARQLPDKAISLLDTACARVAVSQHATPAEVEDIDRRAQALALEAGILEREEAVGMDVTARRGEVEAARTAVAADRAA
AEARWEAEKALVAEILELRARLRAEGDALDGTAAQAAEEAEPPKDDRAALLDRLRRCSRDLAEAQGERPLILPTVDRQAV
ASVVQDWTGIPMGRMLASRNERALGLADLLARRVVGQDHAMEAIASRIQTAQAGLGPPEKPLGVFLLCGPSGVGKTETAL
ALAEQLHGGEQALITINMSEFQEAHTVSTLKGSPPGYVGYGKGGILTEAVRRKPYSVILLDEVEKAHPDVHEIFFQVFDK
GRMDDSEGRQIDFRNTVILLTSNVGTDEIVEAAGQDLARVSATLRAPLLQVFPAALLGRMIVLPFLPLSDRMIAAIAGQK
LEAIARRLKAGHGAELVLGEGVLETIRARCTEVESGGRMIDAILSGTLLPELSRKLLERQLAGAAFSRVTLTGGPAGFSY
AFETEADHA
>Mature_888_residues
PRGSQETVKRKELVAKLNPTCLAAFSAAAQAAKARGNPYVELVHLIEALLAADRSDMALLMRAAGCDAGRLSADVARAVD
ALPRGASAVEEFSDHLFHAIREGWTFGSLRFGDDRVRSGYLLLGALRVPVLEALLMRISGAFGQVDAESLSETFRDLTQG
SAEGDAAPPPARPGAADGSALARYATDLTARAREGRLDPVVGRDPEIRQIIDILMRRRQNNPILTGEAGVGKTAVVEGLA
LRLARGDVPPPLRPVTLWMLDLGLMQAGASMKGEFEKRLKSVIDEVHASDAPVILFIDEAHTLIGAGGAAGTGDAANLLK
PALARGELRTIAATTWAEYKQHIEPDPALTRRFQVVRIEEPSEEAAIRMCRGVAAVLERHHRVEILDEAVGAAVRLSQRY
LPARQLPDKAISLLDTACARVAVSQHATPAEVEDIDRRAQALALEAGILEREEAVGMDVTARRGEVEAARTAVAADRAAA
EARWEAEKALVAEILELRARLRAEGDALDGTAAQAAEEAEPPKDDRAALLDRLRRCSRDLAEAQGERPLILPTVDRQAVA
SVVQDWTGIPMGRMLASRNERALGLADLLARRVVGQDHAMEAIASRIQTAQAGLGPPEKPLGVFLLCGPSGVGKTETALA
LAEQLHGGEQALITINMSEFQEAHTVSTLKGSPPGYVGYGKGGILTEAVRRKPYSVILLDEVEKAHPDVHEIFFQVFDKG
RMDDSEGRQIDFRNTVILLTSNVGTDEIVEAAGQDLARVSATLRAPLLQVFPAALLGRMIVLPFLPLSDRMIAAIAGQKL
EAIARRLKAGHGAELVLGEGVLETIRARCTEVESGGRMIDAILSGTLLPELSRKLLERQLAGAAFSRVTLTGGPAGFSYA
FETEADHA

Specific function: Required for secretion of hcp1 probably by providing the energy source for its translocation [H]

COG id: COG0542

COG function: function code O; ATPases with chaperone activity, ATP-binding subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the clpA/clpB family [H]

Homologues:

Organism=Homo sapiens, GI13540606, Length=313, Percent_Identity=31.629392971246, Blast_Score=159, Evalue=1e-38,
Organism=Escherichia coli, GI1788943, Length=865, Percent_Identity=39.0751445086705, Blast_Score=538, Evalue=1e-154,
Organism=Escherichia coli, GI1787109, Length=283, Percent_Identity=43.8162544169611, Blast_Score=231, Evalue=1e-61,
Organism=Saccharomyces cerevisiae, GI6320464, Length=723, Percent_Identity=38.7275242047026, Blast_Score=453, Evalue=1e-128,
Organism=Saccharomyces cerevisiae, GI6323002, Length=709, Percent_Identity=35.4019746121298, Blast_Score=421, Evalue=1e-118,

Paralogues:

None

Copy number: 560 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013093
- InterPro:   IPR003959
- InterPro:   IPR017729
- InterPro:   IPR018368
- InterPro:   IPR001270
- InterPro:   IPR019489
- InterPro:   IPR023150 [H]

Pfam domain/function: PF00004 AAA; PF07724 AAA_2; PF10431 ClpB_D2-small [H]

EC number: NA

Molecular weight: Translated: 95164; Mature: 95033

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: PS00870 CLPAB_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRGSQETVKRKELVAKLNPTCLAAFSAAAQAAKARGNPYVELVHLIEALLAADRSDMAL
CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHH
LMRAAGCDAGRLSADVARAVDALPRGASAVEEFSDHLFHAIREGWTFGSLRFGDDRVRSG
HHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHCC
YLLLGALRVPVLEALLMRISGAFGQVDAESLSETFRDLTQGSAEGDAAPPPARPGAADGS
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH
ALARYATDLTARAREGRLDPVVGRDPEIRQIIDILMRRRQNNPILTGEAGVGKTAVVEGL
HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHH
ALRLARGDVPPPLRPVTLWMLDLGLMQAGASMKGEFEKRLKSVIDEVHASDAPVILFIDE
HHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC
AHTLIGAGGAAGTGDAANLLKPALARGELRTIAATTWAEYKQHIEPDPALTRRFQVVRIE
CCHHEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHCEEEEEEC
EPSEEAAIRMCRGVAAVLERHHRVEILDEAVGAAVRLSQRYLPARQLPDKAISLLDTACA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHH
RVAVSQHATPAEVEDIDRRAQALALEAGILEREEAVGMDVTARRGEVEAARTAVAADRAA
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
AEARWEAEKALVAEILELRARLRAEGDALDGTAAQAAEEAEPPKDDRAALLDRLRRCSRD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LAEAQGERPLILPTVDRQAVASVVQDWTGIPMGRMLASRNERALGLADLLARRVVGQDHA
HHHHCCCCCEEEECCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCHHH
MEAIASRIQTAQAGLGPPEKPLGVFLLCGPSGVGKTETALALAEQLHGGEQALITINMSE
HHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEEHHH
FQEAHTVSTLKGSPPGYVGYGKGGILTEAVRRKPYSVILLDEVEKAHPDVHEIFFQVFDK
HHHHHHHHHCCCCCCCEECCCCCCHHHHHHHCCCCEEEEEECHHHHCCCHHHHHHHHHHC
GRMDDSEGRQIDFRNTVILLTSNVGTDEIVEAAGQDLARVSATLRAPLLQVFPAALLGRM
CCCCCCCCCEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVLPFLPLSDRMIAAIAGQKLEAIARRLKAGHGAELVLGEGVLETIRARCTEVESGGRMI
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHCCCHHH
DAILSGTLLPELSRKLLERQLAGAAFSRVTLTGGPAGFSYAFETEADHA
HHHHHCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEECCCCCCC
>Mature Secondary Structure 
PRGSQETVKRKELVAKLNPTCLAAFSAAAQAAKARGNPYVELVHLIEALLAADRSDMAL
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHH
LMRAAGCDAGRLSADVARAVDALPRGASAVEEFSDHLFHAIREGWTFGSLRFGDDRVRSG
HHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHCC
YLLLGALRVPVLEALLMRISGAFGQVDAESLSETFRDLTQGSAEGDAAPPPARPGAADGS
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH
ALARYATDLTARAREGRLDPVVGRDPEIRQIIDILMRRRQNNPILTGEAGVGKTAVVEGL
HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHH
ALRLARGDVPPPLRPVTLWMLDLGLMQAGASMKGEFEKRLKSVIDEVHASDAPVILFIDE
HHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC
AHTLIGAGGAAGTGDAANLLKPALARGELRTIAATTWAEYKQHIEPDPALTRRFQVVRIE
CCHHEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHCEEEEEEC
EPSEEAAIRMCRGVAAVLERHHRVEILDEAVGAAVRLSQRYLPARQLPDKAISLLDTACA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHH
RVAVSQHATPAEVEDIDRRAQALALEAGILEREEAVGMDVTARRGEVEAARTAVAADRAA
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
AEARWEAEKALVAEILELRARLRAEGDALDGTAAQAAEEAEPPKDDRAALLDRLRRCSRD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LAEAQGERPLILPTVDRQAVASVVQDWTGIPMGRMLASRNERALGLADLLARRVVGQDHA
HHHHCCCCCEEEECCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCHHH
MEAIASRIQTAQAGLGPPEKPLGVFLLCGPSGVGKTETALALAEQLHGGEQALITINMSE
HHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEEHHH
FQEAHTVSTLKGSPPGYVGYGKGGILTEAVRRKPYSVILLDEVEKAHPDVHEIFFQVFDK
HHHHHHHHHCCCCCCCEECCCCCCHHHHHHHCCCCEEEEEECHHHHCCCHHHHHHHHHHC
GRMDDSEGRQIDFRNTVILLTSNVGTDEIVEAAGQDLARVSATLRAPLLQVFPAALLGRM
CCCCCCCCCEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVLPFLPLSDRMIAAIAGQKLEAIARRLKAGHGAELVLGEGVLETIRARCTEVESGGRMI
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHCCCHHH
DAILSGTLLPELSRKLLERQLAGAAFSRVTLTGGPAGFSYAFETEADHA
HHHHHCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Serine endopeptidases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]