| Definition | Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007494 |
| Length | 943,016 |
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The map label for this gene is 77465384
Identifier: 77465384
GI number: 77465384
Start: 445798
End: 446205
Strand: Reverse
Name: 77465384
Synonym: RSP_3382
Alternate gene names: NA
Gene position: 446205-445798 (Counterclockwise)
Preceding gene: 77465385
Following gene: 77465383
Centisome position: 47.32
GC content: 64.71
Gene sequence:
>408_bases ATGGCCACACACCGACTTCTGAGCGACGAGGAGGCTGCCCGCGATCCGCGCGTGGCCGCAATCTTCGCCGACATCCGCGA GACGCGGAAAACCGACTATATCAACAACTTCTGGCGCGCTCTTGCCAATCAGCCCGAGCTTCTGGAAAGCATATGGAACC GGCTCCGGCAGGTCATGGCGCCGGGCGCGCTCGATCCCCTGACCAAGGAGCTGATCTATATCGCCGTCTCGGTGACGAAC GGCTGTTCCTACTGCACCCATTCCCATACGGCGGCCGCCCGCGCCAAGGGGCTCAGCCCGGAGCAGGAGGCCGAGTTCCT CGCGGTGCTGGGCATGGCGGCCCAGACCAACCAGCTCGTGACCGCGCTTCAGGTGCCGGTCGACGCGGCCTTTCAGGTGG AAACATGA
Upstream 100 bases:
>100_bases GCGCCGAAGCACCGCGGCGGAACCGGCGGTCCCGCCCGCGTCATCGCGCTGATCTGAACTGTCGCCCGGCCGTCCGCGGC CGGGCCAACCCGAGGACCCC
Downstream 100 bases:
>100_bases CCGATCACGCCATCGTTGCGACCCGCCCCGGCGGCCCCGACGTGCTCGAATGGGCCGAGCGCCCCGCCGGGCGGCCCGGA CCGGGCGAGGTGCGCCTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Alkylhydroperoxidase Like Protein AhpD Family; Alkylhydroperoxidase AhpD Core; Alkylhydroperoxidase AhpD Family Core Domain-Containing; Carboxymuconolactone Decarboxylase Protein; Alkylhydroperoxidase-Like Protein; Alcohol Dehydrogenase; AhpD Family Alkylhydroperoxidase-Like Protein
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MATHRLLSDEEAARDPRVAAIFADIRETRKTDYINNFWRALANQPELLESIWNRLRQVMAPGALDPLTKELIYIAVSVTN GCSYCTHSHTAAARAKGLSPEQEAEFLAVLGMAAQTNQLVTALQVPVDAAFQVET
Sequences:
>Translated_135_residues MATHRLLSDEEAARDPRVAAIFADIRETRKTDYINNFWRALANQPELLESIWNRLRQVMAPGALDPLTKELIYIAVSVTN GCSYCTHSHTAAARAKGLSPEQEAEFLAVLGMAAQTNQLVTALQVPVDAAFQVET >Mature_134_residues ATHRLLSDEEAARDPRVAAIFADIRETRKTDYINNFWRALANQPELLESIWNRLRQVMAPGALDPLTKELIYIAVSVTNG CSYCTHSHTAAARAKGLSPEQEAEFLAVLGMAAQTNQLVTALQVPVDAAFQVET
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14897; Mature: 14766
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATHRLLSDEEAARDPRVAAIFADIRETRKTDYINNFWRALANQPELLESIWNRLRQVMA CCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC PGALDPLTKELIYIAVSVTNGCSYCTHSHTAAARAKGLSPEQEAEFLAVLGMAAQTNQLV CCCCCHHHHHHHHHEEECCCCCCHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH TALQVPVDAAFQVET HHHHCCCCCEEEECC >Mature Secondary Structure ATHRLLSDEEAARDPRVAAIFADIRETRKTDYINNFWRALANQPELLESIWNRLRQVMA CCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC PGALDPLTKELIYIAVSVTNGCSYCTHSHTAAARAKGLSPEQEAEFLAVLGMAAQTNQLV CCCCCHHHHHHHHHEEECCCCCCHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH TALQVPVDAAFQVET HHHHCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA