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The map label for this gene is 77465328

Identifier: 77465328

GI number: 77465328

Start: 390593

End: 391252

Strand: Reverse

Name: 77465328

Synonym: RSP_3327

Alternate gene names: NA

Gene position: 391252-390593 (Counterclockwise)

Preceding gene: 77465329

Following gene: 77465327

Centisome position: 41.49

GC content: 68.48

Gene sequence:

>660_bases
ATGTCGCACTCCCAGAATCGCCGCACGGGCCCGCTTTCCTCTTCCACCGCCGGAGCCCCCGGCTACATCTGGGCTCTGGT
CGGCAGTCTCGCCCTCATCGAGCTCGTGCTGACGGCTGCCGATGCCGGCTGGGTGGGCGATCCGCGCTGGCGGACGATGG
CGCTGCTGCTCGGTGCCTTCTGGCCGCCGCTGCTGGCGCCCGGGGCGGGCGAGCTCTATCCGCTCCAGCGCGAGGCGATG
TTCCTCACCCACGCCTTCCTCCATGCGAATTTCCTGCACATGGTGATGAACGGGGTGATCCTTTTGTCGCTCGGCAAGGT
GATCGGCGAGAAGGTCGGCGCCCTGCGCACCTACCTGCTGTTCGGTGCCTCGGCCATCGCAGGCGGCGCGGCCTTCGGGC
TGATCTCGATGTCGAGCGGGCCGATGATCGGCGCCTCGGGCGCGGCCTTCGGATTCCTCGGCATCTGGAACGCCTGGGAT
TTCCAGCGGCGGAAGGCGCTGGGGCTGTCGCTGCGGCCGATTCTCAACATGATCCTGGGTCTGGCCATAGCGAACCTCGC
GCTCTTCGTCTTCCTGCAGGGCGGCCTCGCCTGGGAGGCGCATCTGGGCGGCTATCTCATGGGGTGGGCCGCGGCCTTCA
CCTTCGCCCGCCTGCGCTGA

Upstream 100 bases:

>100_bases
TCCGTCCGTTCAGGGGCGGGCCCCAGAGGTCGGGGGCCTCAGGCCCCGCGTCTGCCGGACCCCCCTTGGCCGAAGCGCCG
CGCCGGCCTATCTCCTCTGC

Downstream 100 bases:

>100_bases
TGTCGCAGGACGGCCGGCACTGGCCGCCCGAGGCGTTCCGCGCAAGGCTCCGGCGCCATCCGGGCCACGGCGCGCGCGCG
GCGCAACCTCTTGAGGCCGT

Product: rhomboid family membrane protein

Products: NA

Alternate protein names: Protein Tyrosine Phosphatase; Rhomboid-Like Protein; Peptidase

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MSHSQNRRTGPLSSSTAGAPGYIWALVGSLALIELVLTAADAGWVGDPRWRTMALLLGAFWPPLLAPGAGELYPLQREAM
FLTHAFLHANFLHMVMNGVILLSLGKVIGEKVGALRTYLLFGASAIAGGAAFGLISMSSGPMIGASGAAFGFLGIWNAWD
FQRRKALGLSLRPILNMILGLAIANLALFVFLQGGLAWEAHLGGYLMGWAAAFTFARLR

Sequences:

>Translated_219_residues
MSHSQNRRTGPLSSSTAGAPGYIWALVGSLALIELVLTAADAGWVGDPRWRTMALLLGAFWPPLLAPGAGELYPLQREAM
FLTHAFLHANFLHMVMNGVILLSLGKVIGEKVGALRTYLLFGASAIAGGAAFGLISMSSGPMIGASGAAFGFLGIWNAWD
FQRRKALGLSLRPILNMILGLAIANLALFVFLQGGLAWEAHLGGYLMGWAAAFTFARLR
>Mature_218_residues
SHSQNRRTGPLSSSTAGAPGYIWALVGSLALIELVLTAADAGWVGDPRWRTMALLLGAFWPPLLAPGAGELYPLQREAMF
LTHAFLHANFLHMVMNGVILLSLGKVIGEKVGALRTYLLFGASAIAGGAAFGLISMSSGPMIGASGAAFGFLGIWNAWDF
QRRKALGLSLRPILNMILGLAIANLALFVFLQGGLAWEAHLGGYLMGWAAAFTFARLR

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23241; Mature: 23110

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHSQNRRTGPLSSSTAGAPGYIWALVGSLALIELVLTAADAGWVGDPRWRTMALLLGAF
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
WPPLLAPGAGELYPLQREAMFLTHAFLHANFLHMVMNGVILLSLGKVIGEKVGALRTYLL
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGASAIAGGAAFGLISMSSGPMIGASGAAFGFLGIWNAWDFQRRKALGLSLRPILNMILG
HHHHHHHCHHHHHEEECCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHH
LAIANLALFVFLQGGLAWEAHLGGYLMGWAAAFTFARLR
HHHHHHHHHHHHHCCCEEEHHHCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SHSQNRRTGPLSSSTAGAPGYIWALVGSLALIELVLTAADAGWVGDPRWRTMALLLGAF
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
WPPLLAPGAGELYPLQREAMFLTHAFLHANFLHMVMNGVILLSLGKVIGEKVGALRTYLL
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGASAIAGGAAFGLISMSSGPMIGASGAAFGFLGIWNAWDFQRRKALGLSLRPILNMILG
HHHHHHHCHHHHHEEECCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHH
LAIANLALFVFLQGGLAWEAHLGGYLMGWAAAFTFARLR
HHHHHHHHHHHHHCCCEEEHHHCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA