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The map label for this gene is yadH [H]

Identifier: 77465279

GI number: 77465279

Start: 331964

End: 332725

Strand: Reverse

Name: yadH [H]

Synonym: RSP_3273

Alternate gene names: 77465279

Gene position: 332725-331964 (Counterclockwise)

Preceding gene: 77465280

Following gene: 77465278

Centisome position: 35.28

GC content: 64.17

Gene sequence:

>762_bases
ATGAACCTTCAGGCTGTCCGGGTGATCTTCGCCAAGGAGATGGCGCGCTTCTTCCGCACCATCCTCGAGTCGCTGGCCTC
GCCCGTCATCTCGACCTCGCTTTATTTCGTCGTCTTCGGCGCGGCCATCGGCAGCCGGATCGAGACGGTGGGCGGCGTGA
GCTACGGCGCCTTCATCGTGCCGGGCCTCATCATGCTGACGGTGGTCACGCAGTCGGTGGCCAATGCCTCCTTCGCGATC
CATTTCCCGAAATTCATCGGCACGATGCAGGAGCTGCTGGCGGCCCCTATCGGCTTCACCGAGATCGTGACGGGCTTCGT
GGGGGCGGCGGCGGTCAAGTCGATCCTGATCGGGCTCGTGATCCTCGCCACGGCCTTCCTCTTCGTCGATCTGCCCATCG
CCCATCCGGTGGCGATGCTGGCGCTTCTGGCGCTGACCAGCCTCAGCTTCTCGCTCTTCGGCTTCATCATCGGGATCTGG
GCCAAGGATTTCCAGCAGTTGCAGCTCATCCCGCTGCTCGTGCTGACGCCGCTGATCTTCCTCGGCGGCAGCTTCTACAG
CATCGAGATGCTGCCGGGGCCCTGGCAGACGGTCGCGCTGTTCAATCCGGTGGTCTATCTGATGTCGGTCTTCCGCTGGT
CCTTCTTCGACACGGCCGATGTGCCGGTGGCGGTGAGCCTCGTGGCGATCTTCGCCTTCACCGCGCTCTGCCTCGGTGCG
ATCTGGTGGATCTTCCGCTCGGGCTGGCGCATCCGGCCCTGA

Upstream 100 bases:

>100_bases
TCCTGACCGAGATGCGCGCGGCGGGCCTGCCCATCGCCGACATCGCCACGCGGCAGAGCAGCCTCGAGGACATCTTCGTG
GATCTGGTGAGGGCGGGACG

Downstream 100 bases:

>100_bases
GCGCGGGACAGGCGTCGGTTGCGCTTGACCCGGCCTCTGCACGGGCCAGTTGATAGGGTCTAGGAAAGGAGATGCCCATG
GTCCGCACGCTCGCCCTGTT

Product: ABC multidrug/carbohydrate efflux transporter, inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MNLQAVRVIFAKEMARFFRTILESLASPVISTSLYFVVFGAAIGSRIETVGGVSYGAFIVPGLIMLTVVTQSVANASFAI
HFPKFIGTMQELLAAPIGFTEIVTGFVGAAAVKSILIGLVILATAFLFVDLPIAHPVAMLALLALTSLSFSLFGFIIGIW
AKDFQQLQLIPLLVLTPLIFLGGSFYSIEMLPGPWQTVALFNPVVYLMSVFRWSFFDTADVPVAVSLVAIFAFTALCLGA
IWWIFRSGWRIRP

Sequences:

>Translated_253_residues
MNLQAVRVIFAKEMARFFRTILESLASPVISTSLYFVVFGAAIGSRIETVGGVSYGAFIVPGLIMLTVVTQSVANASFAI
HFPKFIGTMQELLAAPIGFTEIVTGFVGAAAVKSILIGLVILATAFLFVDLPIAHPVAMLALLALTSLSFSLFGFIIGIW
AKDFQQLQLIPLLVLTPLIFLGGSFYSIEMLPGPWQTVALFNPVVYLMSVFRWSFFDTADVPVAVSLVAIFAFTALCLGA
IWWIFRSGWRIRP
>Mature_253_residues
MNLQAVRVIFAKEMARFFRTILESLASPVISTSLYFVVFGAAIGSRIETVGGVSYGAFIVPGLIMLTVVTQSVANASFAI
HFPKFIGTMQELLAAPIGFTEIVTGFVGAAAVKSILIGLVILATAFLFVDLPIAHPVAMLALLALTSLSFSLFGFIIGIW
AKDFQQLQLIPLLVLTPLIFLGGSFYSIEMLPGPWQTVALFNPVVYLMSVFRWSFFDTADVPVAVSLVAIFAFTALCLGA
IWWIFRSGWRIRP

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=252, Percent_Identity=40.0793650793651, Blast_Score=181, Evalue=6e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 27508; Mature: 27508

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLQAVRVIFAKEMARFFRTILESLASPVISTSLYFVVFGAAIGSRIETVGGVSYGAFIV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
PGLIMLTVVTQSVANASFAIHFPKFIGTMQELLAAPIGFTEIVTGFVGAAAVKSILIGLV
HHHHHHHHHHHHHHCCHHEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
ILATAFLFVDLPIAHPVAMLALLALTSLSFSLFGFIIGIWAKDFQQLQLIPLLVLTPLIF
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGGSFYSIEMLPGPWQTVALFNPVVYLMSVFRWSFFDTADVPVAVSLVAIFAFTALCLGA
HCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
IWWIFRSGWRIRP
HHHHHHCCCCCCC
>Mature Secondary Structure
MNLQAVRVIFAKEMARFFRTILESLASPVISTSLYFVVFGAAIGSRIETVGGVSYGAFIV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
PGLIMLTVVTQSVANASFAIHFPKFIGTMQELLAAPIGFTEIVTGFVGAAAVKSILIGLV
HHHHHHHHHHHHHHCCHHEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
ILATAFLFVDLPIAHPVAMLALLALTSLSFSLFGFIIGIWAKDFQQLQLIPLLVLTPLIF
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGGSFYSIEMLPGPWQTVALFNPVVYLMSVFRWSFFDTADVPVAVSLVAIFAFTALCLGA
HCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
IWWIFRSGWRIRP
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]