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The map label for this gene is yebA [C]

Identifier: 77461830

GI number: 77461830

Start: 6281461

End: 6282357

Strand: Reverse

Name: yebA [C]

Synonym: Pfl01_5609

Alternate gene names: 77461830

Gene position: 6282357-6281461 (Counterclockwise)

Preceding gene: 77461831

Following gene: 77461826

Centisome position: 97.58

GC content: 64.21

Gene sequence:

>897_bases
ATGCCCCTGCGCCTGCTGTTTTTTTGTGGTCTGTTCATGGCCTCCACCTCGACTGTGGCCATGACGATCTACAAATCCAC
CGATGCCAACGGAGTGGTTTCGTACAGCGACCGTCCGAGCAAAGGCTCCCAGGTGTTCGTGTTTCAGGACCGGATGGTCG
AGCGCCTCGAGCGCCAGGTCTATCTCGACATCAAGAAGCAGAAGGGCGCGGACGTGGTGTTCGTGCGCAACGACCTGTAC
GCGCCGGTCGAGATTGCCCTGGCGTTTACCGGGATGAGCAACGTGCGCGGCGCGCCGGCGCAAACGATCCGCCGGGTGTT
GCCGGCGCGCAGCAATACGCGGCTGGCGCTGCTGACGGCGGTGTCCGGTGGCAAGCCGCTGGTGTACACGCCGCAGTTCC
ATTATTCCCTCGGTGACCCGGCTGGCGCGGCTCAGGGCTATCGCTATCCGTTTCCGTGGCGTGGCGGGCCGTTTCGCCTC
AGCCAGGGCGCCAACGGCGACTACAGCCACTTCGGGCCGAAGAACAAGTACGCGATGGACATCGCCATGCCGGTCGGCAC
GCCGATCATTGCGGCGCGGGCCGGGGTGGTGGTGAAGACCGAGAATTCCCAGAACGGGCGCGGCACCGATCCGTCCGGCA
ACTTCGTGCGGATACTGCACGACGACGGCACGATGGGTGTGTACCTGCATCTCAAGCAAGGATCGGTGAGTGTCCGGGAG
GGGCAACGGGTTACGGTGGGCAGCCCGCTGGCGCTGTCAGGCAATACCGGCAACAGCAGCGGCCCGCACCTGCACTTCGT
GGTGCAGCGCAATACCGGGATGGGGCTGGTGTCGATTCCGTATCAGTTCAACCGGCCGCTGGGGGCGTTGCCCAACTTTG
CGTTGGGCAAGCAGTAA

Upstream 100 bases:

>100_bases
CCATCTCTCGCGCTGCCCAATTTGAAACATCTGTCGACTAGCCTGGTCTGCTTCAGCTGCTAGGCTCATTCCCAGGCCTT
ACTCGACAGAATTTTTGCCC

Downstream 100 bases:

>100_bases
ACCCCGTCAGTCGAGCATCAGCACCTTGGCCAGAATGATCTTTGGACCTTTCATCTTCTTGATGATGATCCGCAGGCCTT
CGACTTCCAGCACTTCTTCC

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MPLRLLFFCGLFMASTSTVAMTIYKSTDANGVVSYSDRPSKGSQVFVFQDRMVERLERQVYLDIKKQKGADVVFVRNDLY
APVEIALAFTGMSNVRGAPAQTIRRVLPARSNTRLALLTAVSGGKPLVYTPQFHYSLGDPAGAAQGYRYPFPWRGGPFRL
SQGANGDYSHFGPKNKYAMDIAMPVGTPIIAARAGVVVKTENSQNGRGTDPSGNFVRILHDDGTMGVYLHLKQGSVSVRE
GQRVTVGSPLALSGNTGNSSGPHLHFVVQRNTGMGLVSIPYQFNRPLGALPNFALGKQ

Sequences:

>Translated_298_residues
MPLRLLFFCGLFMASTSTVAMTIYKSTDANGVVSYSDRPSKGSQVFVFQDRMVERLERQVYLDIKKQKGADVVFVRNDLY
APVEIALAFTGMSNVRGAPAQTIRRVLPARSNTRLALLTAVSGGKPLVYTPQFHYSLGDPAGAAQGYRYPFPWRGGPFRL
SQGANGDYSHFGPKNKYAMDIAMPVGTPIIAARAGVVVKTENSQNGRGTDPSGNFVRILHDDGTMGVYLHLKQGSVSVRE
GQRVTVGSPLALSGNTGNSSGPHLHFVVQRNTGMGLVSIPYQFNRPLGALPNFALGKQ
>Mature_297_residues
PLRLLFFCGLFMASTSTVAMTIYKSTDANGVVSYSDRPSKGSQVFVFQDRMVERLERQVYLDIKKQKGADVVFVRNDLYA
PVEIALAFTGMSNVRGAPAQTIRRVLPARSNTRLALLTAVSGGKPLVYTPQFHYSLGDPAGAAQGYRYPFPWRGGPFRLS
QGANGDYSHFGPKNKYAMDIAMPVGTPIIAARAGVVVKTENSQNGRGTDPSGNFVRILHDDGTMGVYLHLKQGSVSVREG
QRVTVGSPLALSGNTGNSSGPHLHFVVQRNTGMGLVSIPYQFNRPLGALPNFALGKQ

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=93, Percent_Identity=40.8602150537634, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 32272; Mature: 32141

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLRLLFFCGLFMASTSTVAMTIYKSTDANGVVSYSDRPSKGSQVFVFQDRMVERLERQV
CCEEHHHHHHHHHHCCCEEEEEEEECCCCCEEEEECCCCCCCCEEEEEHHHHHHHHHHEE
YLDIKKQKGADVVFVRNDLYAPVEIALAFTGMSNVRGAPAQTIRRVLPARSNTRLALLTA
EEEEECCCCCCEEEEECCCCCCEEEEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEEE
VSGGKPLVYTPQFHYSLGDPAGAAQGYRYPFPWRGGPFRLSQGANGDYSHFGPKNKYAMD
ECCCCCEEECCCEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEE
IAMPVGTPIIAARAGVVVKTENSQNGRGTDPSGNFVRILHDDGTMGVYLHLKQGSVSVRE
EEECCCCCEEEECCCEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCEEECC
GQRVTVGSPLALSGNTGNSSGPHLHFVVQRNTGMGLVSIPYQFNRPLGALPNFALGKQ
CCEEEECCCEEEECCCCCCCCCEEEEEEEECCCCEEEECCHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PLRLLFFCGLFMASTSTVAMTIYKSTDANGVVSYSDRPSKGSQVFVFQDRMVERLERQV
CEEHHHHHHHHHHCCCEEEEEEEECCCCCEEEEECCCCCCCCEEEEEHHHHHHHHHHEE
YLDIKKQKGADVVFVRNDLYAPVEIALAFTGMSNVRGAPAQTIRRVLPARSNTRLALLTA
EEEEECCCCCCEEEEECCCCCCEEEEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEEE
VSGGKPLVYTPQFHYSLGDPAGAAQGYRYPFPWRGGPFRLSQGANGDYSHFGPKNKYAMD
ECCCCCEEECCCEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEE
IAMPVGTPIIAARAGVVVKTENSQNGRGTDPSGNFVRILHDDGTMGVYLHLKQGSVSVRE
EEECCCCCEEEECCCEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCEEECC
GQRVTVGSPLALSGNTGNSSGPHLHFVVQRNTGMGLVSIPYQFNRPLGALPNFALGKQ
CCEEEECCCEEEECCCCCCCCCEEEEEEEECCCCEEEECCHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]