| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461826
Identifier: 77461826
GI number: 77461826
Start: 6277417
End: 6277800
Strand: Reverse
Name: 77461826
Synonym: Pfl01_5605
Alternate gene names: NA
Gene position: 6277800-6277417 (Counterclockwise)
Preceding gene: 77461830
Following gene: 77461823
Centisome position: 97.51
GC content: 57.81
Gene sequence:
>384_bases ATGACTCAAATGACTGCTTCCTTTAAGGCTTTGCTGATGGCTGCCGCCCTGACTCTGCCTGGACTGGCGATGGCGGCCGA GCCGGCCATGATGAAAGATGGAATGATGGTCGACCACAACGGCATGACGCTTTACACGTTCGACAAGGACAGTGGCGGCA AGTCGATGTGCAACGGCGACTGCGCCAAGAACTGGCCGCCGCTGATGGCTCCCGCAGGCGCCAAGGCCGAAGGCAAATGG ACGGTGATCAAGCGCGATGACGGCATGATGCAGTACGCCTACGACGGCAAACCGCTGTATACCTTTGTGAAAGATGCCAA GCCGGGCGATATGACCGGCGACAAGATGAAGGACGTGTGGCACGTGATGCGCGAGCACAAATAA
Upstream 100 bases:
>100_bases TTATTGCAGTCGTGTGACAGTATTTTAGTCCGGCGGCGATTGTGCGAATCCTGAACTAAGCTCTAAGTCCGAATCCTGAC AACCACAAGAGAAGGTTTCC
Downstream 100 bases:
>100_bases ACGCAAATGCCCTGTGGGAGCGAGCAAACTCGCTCCCACAGGTTCTGTGGATCAGCGCAACGCGTAATCCAGCACGATCC CGACGAAAATCGCCAGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Secreted Repeat-Containing Protein; Exported Protein; Blue Copper Domain Protein; Signal Peptide Protein; Secreted Repeat Protein; Exported Lipoprotein; Secreted Protein
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MTQMTASFKALLMAAALTLPGLAMAAEPAMMKDGMMVDHNGMTLYTFDKDSGGKSMCNGDCAKNWPPLMAPAGAKAEGKW TVIKRDDGMMQYAYDGKPLYTFVKDAKPGDMTGDKMKDVWHVMREHK
Sequences:
>Translated_127_residues MTQMTASFKALLMAAALTLPGLAMAAEPAMMKDGMMVDHNGMTLYTFDKDSGGKSMCNGDCAKNWPPLMAPAGAKAEGKW TVIKRDDGMMQYAYDGKPLYTFVKDAKPGDMTGDKMKDVWHVMREHK >Mature_126_residues TQMTASFKALLMAAALTLPGLAMAAEPAMMKDGMMVDHNGMTLYTFDKDSGGKSMCNGDCAKNWPPLMAPAGAKAEGKWT VIKRDDGMMQYAYDGKPLYTFVKDAKPGDMTGDKMKDVWHVMREHK
Specific function: Unknown
COG id: COG4315
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13948; Mature: 13816
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 12.6 %Met (Translated Protein) 14.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 11.9 %Met (Mature Protein) 13.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQMTASFKALLMAAALTLPGLAMAAEPAMMKDGMMVDHNGMTLYTFDKDSGGKSMCNGD CCCCHHHHHHHHHHHHHHCCCCHHHCCCCHHCCCEEEECCCCEEEEEECCCCCCCCCCCC CAKNWPPLMAPAGAKAEGKWTVIKRDDGMMQYAYDGKPLYTFVKDAKPGDMTGDKMKDVW CCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCEEEEEEECCCCCCCCCHHHHHHH HVMREHK HHHHHCC >Mature Secondary Structure TQMTASFKALLMAAALTLPGLAMAAEPAMMKDGMMVDHNGMTLYTFDKDSGGKSMCNGD CCCHHHHHHHHHHHHHHCCCCHHHCCCCHHCCCEEEECCCCEEEEEECCCCCCCCCCCC CAKNWPPLMAPAGAKAEGKWTVIKRDDGMMQYAYDGKPLYTFVKDAKPGDMTGDKMKDVW CCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCEEEEEEECCCCCCCCCHHHHHHH HVMREHK HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA