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The map label for this gene is alkT [H]

Identifier: 77461822

GI number: 77461822

Start: 6274387

End: 6275535

Strand: Reverse

Name: alkT [H]

Synonym: Pfl01_5601

Alternate gene names: 77461822

Gene position: 6275535-6274387 (Counterclockwise)

Preceding gene: 77461823

Following gene: 77461821

Centisome position: 97.47

GC content: 65.27

Gene sequence:

>1149_bases
ATGAGCGCACCTGTCGTAATCGTTGGCACCGGGCTTGCGGGTTACAACCTGGCCCGCGAGTTTCGCAAACTCGATGGCGA
AACCCCGTTGCTGCTGATTACCGCCGATGACGGTCGCTCCTACTCCAAGCCGATGCTGTCCACCGGCTTCGGCAAGAACA
AGGACGCCGACGGCTTGAGCATGGCCGAGCCGGGCGCGATGGCCGAGCAGTTGAAGGCCGAGATCCGCACCCATACCCGC
ATCAGCGGCATCGATCCGGGCCACAAGCGGCTGTGGATCGGCGAGGAAGCGGTGAGCTATCGCGACCTGATCCTCGCCTG
GGGCGCCGAAACCGTGCGCGTGCCGATCGAAGGCGACGGCGGGGATCTGGTGTTCCCGATCAACGATCTCGAAGACTACG
CGCGCTTTCGCGCCGCAGCGGCCGGCAAGCGTCGGGTGTTGCTGCTCGGCGCCGGACTGATCGGCTGCGAGTTCGCCAAT
GACCTGATTCTGGGCGGCTACGAGGTGCAGCTGGTCGCGCCGTGCGAACAGGTCATGCCGACTCTTCTGCATCCCGCGGC
GGCGGCTGCGGTGCAGGCCGGGCTGGAAAGCCTCGGTGCACGTTTCCACCTCGGCCCGGTGCTGACCCGCCTGCAAAAAG
TCGCGGATGGGCTGGAAGCGCACCTGTCCGACGGTCAGGTTGTCCCGTGCGATGTGGTGGTCTCGGCCATCGGCCTGCGC
CCGCGGATCGACCTGGCGGCAGCCGCCGGCATCCAGACCAATCGCGGCGTGGTGGTCGACCGTCATCTGCAAACCTCGCA
CGCCAACATTTACGCTTTGGGCGACTGCGCCGAGGTCGACGGGCTGAATCTTCTGTACGTCATGCCCCTCATGAGTTGTG
CGCGAGCGCTGGCACAAACCCTGGCCGGCAACCCGACCGTGGTGAACTATGGACCGATGCCGATCACCGTGAAAACCCCG
GTCTGCCCACTGGTGGTTTCCCCGCCGCCTCGGGGCCGCGAGGGTGTTTGGACCGTTGAGGGGCAGGGCGCCGATATCAA
GGTGTTGTGCCACGACGCAGAAGGGCAATTGCTCGGTTACGCCCTGACCGGCGCGGCGGTGATGGAAAAACTCGCACTGA
ACAAACAGCTTCCGGCCTTGCTGGCGTAA

Upstream 100 bases:

>100_bases
GCAGGACGTGCCGGAAGACTGGCTGTGCCCGGACTGCGGCGTCGGCAAGATGGACTTCGAAATGATCGAAATCAACTGAG
AAAACACTGAGGAGTAGGGC

Downstream 100 bases:

>100_bases
ATACCGGTCGTTCTGTCGGAATCACCCCGCTTTTGCCCCCACAAACGTCGCGGGGAGACTGGCGCCGCCCTTAACCGCGT
GCCATCCTCACTCCCGTCTG

Product: FAD-dependent pyridine nucleotide-disulfide oxidoreductase

Products: NA

Alternate protein names: RdxR [H]

Number of amino acids: Translated: 382; Mature: 381

Protein sequence:

>382_residues
MSAPVVIVGTGLAGYNLAREFRKLDGETPLLLITADDGRSYSKPMLSTGFGKNKDADGLSMAEPGAMAEQLKAEIRTHTR
ISGIDPGHKRLWIGEEAVSYRDLILAWGAETVRVPIEGDGGDLVFPINDLEDYARFRAAAAGKRRVLLLGAGLIGCEFAN
DLILGGYEVQLVAPCEQVMPTLLHPAAAAAVQAGLESLGARFHLGPVLTRLQKVADGLEAHLSDGQVVPCDVVVSAIGLR
PRIDLAAAAGIQTNRGVVVDRHLQTSHANIYALGDCAEVDGLNLLYVMPLMSCARALAQTLAGNPTVVNYGPMPITVKTP
VCPLVVSPPPRGREGVWTVEGQGADIKVLCHDAEGQLLGYALTGAAVMEKLALNKQLPALLA

Sequences:

>Translated_382_residues
MSAPVVIVGTGLAGYNLAREFRKLDGETPLLLITADDGRSYSKPMLSTGFGKNKDADGLSMAEPGAMAEQLKAEIRTHTR
ISGIDPGHKRLWIGEEAVSYRDLILAWGAETVRVPIEGDGGDLVFPINDLEDYARFRAAAAGKRRVLLLGAGLIGCEFAN
DLILGGYEVQLVAPCEQVMPTLLHPAAAAAVQAGLESLGARFHLGPVLTRLQKVADGLEAHLSDGQVVPCDVVVSAIGLR
PRIDLAAAAGIQTNRGVVVDRHLQTSHANIYALGDCAEVDGLNLLYVMPLMSCARALAQTLAGNPTVVNYGPMPITVKTP
VCPLVVSPPPRGREGVWTVEGQGADIKVLCHDAEGQLLGYALTGAAVMEKLALNKQLPALLA
>Mature_381_residues
SAPVVIVGTGLAGYNLAREFRKLDGETPLLLITADDGRSYSKPMLSTGFGKNKDADGLSMAEPGAMAEQLKAEIRTHTRI
SGIDPGHKRLWIGEEAVSYRDLILAWGAETVRVPIEGDGGDLVFPINDLEDYARFRAAAAGKRRVLLLGAGLIGCEFAND
LILGGYEVQLVAPCEQVMPTLLHPAAAAAVQAGLESLGARFHLGPVLTRLQKVADGLEAHLSDGQVVPCDVVVSAIGLRP
RIDLAAAAGIQTNRGVVVDRHLQTSHANIYALGDCAEVDGLNLLYVMPLMSCARALAQTLAGNPTVVNYGPMPITVKTPV
CPLVVSPPPRGREGVWTVEGQGADIKVLCHDAEGQLLGYALTGAAVMEKLALNKQLPALLA

Specific function: Involved in the hydrocarbon hydroxylating system, which transfers electrons from NADH to rubredoxin reductase and then through rubredoxin to alkane 1 monooxygenase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAD-dependent oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1789065, Length=378, Percent_Identity=33.0687830687831, Blast_Score=203, Evalue=1e-53,
Organism=Escherichia coli, GI1789765, Length=309, Percent_Identity=25.8899676375405, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1788892, Length=276, Percent_Identity=25.3623188405797, Blast_Score=65, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17559934, Length=317, Percent_Identity=23.3438485804416, Blast_Score=73, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013027
- InterPro:   IPR001327 [H]

Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]

EC number: =1.18.1.1 [H]

Molecular weight: Translated: 40283; Mature: 40152

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPVVIVGTGLAGYNLAREFRKLDGETPLLLITADDGRSYSKPMLSTGFGKNKDADGLS
CCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHCCCCCCCCCCCCC
MAEPGAMAEQLKAEIRTHTRISGIDPGHKRLWIGEEAVSYRDLILAWGAETVRVPIEGDG
CCCCCHHHHHHHHHHHHCCEECCCCCCCCEEEECHHHHHHHHEEEEECCCEEEEEEECCC
GDLVFPINDLEDYARFRAAAAGKRRVLLLGAGLIGCEFANDLILGGYEVQLVAPCEQVMP
CEEEEECCCHHHHHHHHHHHCCCCEEEEEECCEEEHHHCCCEEECCEEEEEECCHHHHHH
TLLHPAAAAAVQAGLESLGARFHLGPVLTRLQKVADGLEAHLSDGQVVPCDVVVSAIGLR
HHHCHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCC
PRIDLAAAAGIQTNRGVVVDRHLQTSHANIYALGDCAEVDGLNLLYVMPLMSCARALAQT
CCCCHHHHCCCCCCCCEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
LAGNPTVVNYGPMPITVKTPVCPLVVSPPPRGREGVWTVEGQGADIKVLCHDAEGQLLGY
HCCCCEEEEECCEEEEEECCCCEEEECCCCCCCCCEEEEECCCCEEEEEEECCCCCEEEE
ALTGAAVMEKLALNKQLPALLA
EHHHHHHHHHHHHCCCCHHHCC
>Mature Secondary Structure 
SAPVVIVGTGLAGYNLAREFRKLDGETPLLLITADDGRSYSKPMLSTGFGKNKDADGLS
CCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHCCCCCCCCCCCCC
MAEPGAMAEQLKAEIRTHTRISGIDPGHKRLWIGEEAVSYRDLILAWGAETVRVPIEGDG
CCCCCHHHHHHHHHHHHCCEECCCCCCCCEEEECHHHHHHHHEEEEECCCEEEEEEECCC
GDLVFPINDLEDYARFRAAAAGKRRVLLLGAGLIGCEFANDLILGGYEVQLVAPCEQVMP
CEEEEECCCHHHHHHHHHHHCCCCEEEEEECCEEEHHHCCCEEECCEEEEEECCHHHHHH
TLLHPAAAAAVQAGLESLGARFHLGPVLTRLQKVADGLEAHLSDGQVVPCDVVVSAIGLR
HHHCHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCC
PRIDLAAAAGIQTNRGVVVDRHLQTSHANIYALGDCAEVDGLNLLYVMPLMSCARALAQT
CCCCHHHHCCCCCCCCEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
LAGNPTVVNYGPMPITVKTPVCPLVVSPPPRGREGVWTVEGQGADIKVLCHDAEGQLLGY
HCCCCEEEEECCEEEEEECCCCEEEECCCCCCCCCEEEEECCCCEEEEEEECCCCCEEEE
ALTGAAVMEKLALNKQLPALLA
EHHHHHHHHHHHHCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]