| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461790
Identifier: 77461790
GI number: 77461790
Start: 6236049
End: 6236534
Strand: Reverse
Name: 77461790
Synonym: Pfl01_5569
Alternate gene names: NA
Gene position: 6236534-6236049 (Counterclockwise)
Preceding gene: 77461791
Following gene: 77461789
Centisome position: 96.86
GC content: 53.09
Gene sequence:
>486_bases ATGAGCTGGTTGCCGATGGCCGTTCTGGCGGCAGGTGTCTGCAATCAGGAAACTGACTCCAAATATTTCTTATCGCAATG GCCGGAGAGCGGCGCAGATCCGGAAGACATACTTTCCAGTCTCGATGGAAAAGAATTCTCTATCGAGCCAGGCCACGTGG TCTTCCGTGGCGACCTAAATGGCGATGGTATTGAAGACTTCATCTTCAATTCCCGCGTAGGCATTGGCTCATCGATGGAC AGCACATTCGCCTTCCTGATCCAGTGCCGTGGTTACTTGAAGTATTCGGGTGGCGATTACTTCGCCGGAGTCAAAGTTCT GGACGGTCCGCCCAAAGGTGGCGGTGAATTCAAGGACATCGAGATCTACTCCTACATCAGGGACAAGCGAGGGCGGATTC GCTACAAGGGCGAAGAGGGCATGACCCGACCACATCTGTGGCAATTCAACCCGCAGACACAGCGTTATGAAGGTCAGTCT GAGTAA
Upstream 100 bases:
>100_bases TGGATCTGGCGTGGATCGGGTGCGAAGTGTTGTATCGGGATGGTGAATTGGAATTGATGAATTCGAAGGATGTGAAGTGA AACGACTGCTGGTGTTATGC
Downstream 100 bases:
>100_bases GCCAGCGGTTTCCCACTGCAGTTATGGAGTTAGTACTTGAAAGGATTTTCGATTGTTCTCGGCAGCTTGCTGTCAGCTGC CACTTCCATGGCATTCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MSWLPMAVLAAGVCNQETDSKYFLSQWPESGADPEDILSSLDGKEFSIEPGHVVFRGDLNGDGIEDFIFNSRVGIGSSMD STFAFLIQCRGYLKYSGGDYFAGVKVLDGPPKGGGEFKDIEIYSYIRDKRGRIRYKGEEGMTRPHLWQFNPQTQRYEGQS E
Sequences:
>Translated_161_residues MSWLPMAVLAAGVCNQETDSKYFLSQWPESGADPEDILSSLDGKEFSIEPGHVVFRGDLNGDGIEDFIFNSRVGIGSSMD STFAFLIQCRGYLKYSGGDYFAGVKVLDGPPKGGGEFKDIEIYSYIRDKRGRIRYKGEEGMTRPHLWQFNPQTQRYEGQS E >Mature_160_residues SWLPMAVLAAGVCNQETDSKYFLSQWPESGADPEDILSSLDGKEFSIEPGHVVFRGDLNGDGIEDFIFNSRVGIGSSMDS TFAFLIQCRGYLKYSGGDYFAGVKVLDGPPKGGGEFKDIEIYSYIRDKRGRIRYKGEEGMTRPHLWQFNPQTQRYEGQSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18056; Mature: 17925
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: PS00501 SPASE_I_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWLPMAVLAAGVCNQETDSKYFLSQWPESGADPEDILSSLDGKEFSIEPGHVVFRGDLN CCCCHHHHHHHHCCCCCCCCCHHHHHCCCCCCCHHHHHHHCCCCEEEECCCCEEEECCCC GDGIEDFIFNSRVGIGSSMDSTFAFLIQCRGYLKYSGGDYFAGVKVLDGPPKGGGEFKDI CCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCEEEECCCCEEEEEEEECCCCCCCCCCEEE EIYSYIRDKRGRIRYKGEEGMTRPHLWQFNPQTQRYEGQSE HHHHHHHCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCC >Mature Secondary Structure SWLPMAVLAAGVCNQETDSKYFLSQWPESGADPEDILSSLDGKEFSIEPGHVVFRGDLN CCCHHHHHHHHCCCCCCCCCHHHHHCCCCCCCHHHHHHHCCCCEEEECCCCEEEECCCC GDGIEDFIFNSRVGIGSSMDSTFAFLIQCRGYLKYSGGDYFAGVKVLDGPPKGGGEFKDI CCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCEEEECCCCEEEEEEEECCCCCCCCCCEEE EIYSYIRDKRGRIRYKGEEGMTRPHLWQFNPQTQRYEGQSE HHHHHHHCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA