| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461789
Identifier: 77461789
GI number: 77461789
Start: 6235506
End: 6235961
Strand: Reverse
Name: 77461789
Synonym: Pfl01_5568
Alternate gene names: NA
Gene position: 6235961-6235506 (Counterclockwise)
Preceding gene: 77461790
Following gene: 77461788
Centisome position: 96.86
GC content: 58.77
Gene sequence:
>456_bases ATGGCATTCGCCGCCGGTCCCGACTTCAAGGATTACGCCGTCACCCCCGTTTTCAGCGGCCCCAACCATGAGCCGGTGCA GCAAGAACAAAGCAACGTGATCATGGACAGCACCCGGGCGAGGGCGCTGCAAGGCAAGGTCAACTTTGCCGGCCATTACA TCCTGTACAGGTTCGGCTGTGGCGGCGGCGCCACTTGTGGCGAAGTGCTGGACGCCCAGACCGGTGATGTCGTTGGCGGT CTTCCGAATGCCTATGACGGCAGCACTTTCGACACGACGTATTTGCCCGATAGTCGCTTGATCATCATTTCCGGCGTCAC GCTCGATGGCGAAGAAGACGCGCAGGGAAATCGCCTGGAAAACCGTAACCGGGATCGGTACTACGAGTTCGTGAACAACG AGTTCCGGCTGCTTGGCATGACCGACGTGGAATCGCCGTCGATTGATGAGGAATGA
Upstream 100 bases:
>100_bases TCAGTCTGAGTAAGCCAGCGGTTTCCCACTGCAGTTATGGAGTTAGTACTTGAAAGGATTTTCGATTGTTCTCGGCAGCT TGCTGTCAGCTGCCACTTCC
Downstream 100 bases:
>100_bases GAGGATGAACCGTCTTCTTGCGAGCAGCCTTTCGCTGTTGCTCTCGTTTCCAGCATTCGCCGCTCCCAAGGACGCTTTTA CCCAGCGCGATGTCATGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MAFAAGPDFKDYAVTPVFSGPNHEPVQQEQSNVIMDSTRARALQGKVNFAGHYILYRFGCGGGATCGEVLDAQTGDVVGG LPNAYDGSTFDTTYLPDSRLIIISGVTLDGEEDAQGNRLENRNRDRYYEFVNNEFRLLGMTDVESPSIDEE
Sequences:
>Translated_151_residues MAFAAGPDFKDYAVTPVFSGPNHEPVQQEQSNVIMDSTRARALQGKVNFAGHYILYRFGCGGGATCGEVLDAQTGDVVGG LPNAYDGSTFDTTYLPDSRLIIISGVTLDGEEDAQGNRLENRNRDRYYEFVNNEFRLLGMTDVESPSIDEE >Mature_150_residues AFAAGPDFKDYAVTPVFSGPNHEPVQQEQSNVIMDSTRARALQGKVNFAGHYILYRFGCGGGATCGEVLDAQTGDVVGGL PNAYDGSTFDTTYLPDSRLIIISGVTLDGEEDAQGNRLENRNRDRYYEFVNNEFRLLGMTDVESPSIDEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16525; Mature: 16394
Theoretical pI: Translated: 4.08; Mature: 4.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFAAGPDFKDYAVTPVFSGPNHEPVQQEQSNVIMDSTRARALQGKVNFAGHYILYRFGC CCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCHHHEECCCCCCCEEEEEEEEEC GGGATCGEVLDAQTGDVVGGLPNAYDGSTFDTTYLPDSRLIIISGVTLDGEEDAQGNRLE CCCCCHHHHHCCCCCCEECCCCCCCCCCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCC NRNRDRYYEFVNNEFRLLGMTDVESPSIDEE CCCCHHHHHHCCCCEEEEEECCCCCCCCCCC >Mature Secondary Structure AFAAGPDFKDYAVTPVFSGPNHEPVQQEQSNVIMDSTRARALQGKVNFAGHYILYRFGC CCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCHHHEECCCCCCCEEEEEEEEEC GGGATCGEVLDAQTGDVVGGLPNAYDGSTFDTTYLPDSRLIIISGVTLDGEEDAQGNRLE CCCCCHHHHHCCCCCCEECCCCCCCCCCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCC NRNRDRYYEFVNNEFRLLGMTDVESPSIDEE CCCCHHHHHHCCCCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA