Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77461749

Identifier: 77461749

GI number: 77461749

Start: 6197072

End: 6197425

Strand: Reverse

Name: 77461749

Synonym: Pfl01_5528

Alternate gene names: NA

Gene position: 6197425-6197072 (Counterclockwise)

Preceding gene: 77461751

Following gene: 77461747

Centisome position: 96.26

GC content: 62.99

Gene sequence:

>354_bases
ATGAGCTGCAACAGTCAGACAATCCGCACCCTGCGTCAGCAGATTCCCACGTTCGAATGCGTGCCGGGCTGCCATGACTG
CTGCGGGCCGGTGACCACCTCACCCGAAGAAATGTCCCGCCTGCCGCGCAAGACGCGCGCCGAGCAGGACGCGGCCATGG
ACGCACTTGACTGTGTGCACCTAGGGCCGAATGGCTGCACGGTGTATGACGAGCGGCCGTTGATCTGTCGGTTGTTCGGA
ACGACCCAGACCTTGCCGTGCCCCAACGGCCGGCGGCCGGTGGAGCTGATTCATCCACGAGTCGAGAAACAGGTGTTCGA
GTACATGGCCGAAAACCGGCAGGTGCTGGTCTGA

Upstream 100 bases:

>100_bases
GCCGCAGGCCCGAGGCTGGGCAACATTGGTCGGCCCGTGGTGTCTGGATCACGGCTTTTGCGGCACAATTGCCGCCTATT
CCGCTTCAGTTACCGCTGCA

Downstream 100 bases:

>100_bases
GCTCAGTCCGGAATCGGCAGGCTCAAGCTCTCTTTCACTTCTTCCATCACGATGTAGCTCTTGGATTCGCGCACGTGCGG
CAGCTTGAGCAGGATGTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MSCNSQTIRTLRQQIPTFECVPGCHDCCGPVTTSPEEMSRLPRKTRAEQDAAMDALDCVHLGPNGCTVYDERPLICRLFG
TTQTLPCPNGRRPVELIHPRVEKQVFEYMAENRQVLV

Sequences:

>Translated_117_residues
MSCNSQTIRTLRQQIPTFECVPGCHDCCGPVTTSPEEMSRLPRKTRAEQDAAMDALDCVHLGPNGCTVYDERPLICRLFG
TTQTLPCPNGRRPVELIHPRVEKQVFEYMAENRQVLV
>Mature_116_residues
SCNSQTIRTLRQQIPTFECVPGCHDCCGPVTTSPEEMSRLPRKTRAEQDAAMDALDCVHLGPNGCTVYDERPLICRLFGT
TQTLPCPNGRRPVELIHPRVEKQVFEYMAENRQVLV

Specific function: Unknown

COG id: COG0727

COG function: function code R; Predicted Fe-S-cluster oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13204; Mature: 13073

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
11.1 %Cys+Met (Translated Protein)
7.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
10.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCNSQTIRTLRQQIPTFECVPGCHDCCGPVTTSPEEMSRLPRKTRAEQDAAMDALDCVH
CCCCHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHE
LGPNGCTVYDERPLICRLFGTTQTLPCPNGRRPVELIHPRVEKQVFEYMAENRQVLV
ECCCCCEEECCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEECC
>Mature Secondary Structure 
SCNSQTIRTLRQQIPTFECVPGCHDCCGPVTTSPEEMSRLPRKTRAEQDAAMDALDCVH
CCCHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHE
LGPNGCTVYDERPLICRLFGTTQTLPCPNGRRPVELIHPRVEKQVFEYMAENRQVLV
ECCCCCEEECCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA