Click here to switch to the map view.

The map label for this gene is dadA2 [H]

Identifier: 77461747

GI number: 77461747

Start: 6195121

End: 6196425

Strand: Reverse

Name: dadA2 [H]

Synonym: Pfl01_5526

Alternate gene names: 77461747

Gene position: 6196425-6195121 (Counterclockwise)

Preceding gene: 77461749

Following gene: 77461746

Centisome position: 96.24

GC content: 64.21

Gene sequence:

>1305_bases
ATGCGCGTTATGGTCTTGGGTAGCGGCGTCATCGGTACCGCCAGTGCTTACTATCTGGCCCGTGCCGGGTTTGAAGTGGT
GGTGGTCGACCGGCAGCCCGCCGCGGCCATGGAGACCAGTTTCGCCAACGCCGGCCAGGTCTCGCCGGGCTACGCCTCGC
CGTGGGCCGCGCCGGGCGTACCCCTCAAAGCCATCAAGTGGCTGCTGCAACGCCACGCACCGCTGGCGATCAAGGCCACC
GCCGACATCGACCAGTACCTGTGGATGGCGCAGATGCTGCGCAACTGCACCGCCAACCGTTACGCGGTGAACAAGGAGCG
CATGGTGCGTCTGTCCGAGTACAGCCGCGACTGCCTCGACGAACTGCGCGCTGAAACCGGCATCGCCTACGAAGGCCGCA
GCCTCGGTACGACCCAGTTGTTCCGCACACAAGCGCAACTGGATAACGCCGCCAAGGACATCGCCGTATTGAAAGAGTCC
GGCGTGCCGTTCGAAGTCCTCGACCGCGCCGGCATTGCCCGCGTCGAACCGGCGCTGGCCGGTGTCACCGACATCCTCGC
CGGTGCCCTGCGCCTGCCGAACGACCAGACCGGCGACTGCCAGATCTTCACCACCCGCCTCGCCGAAATGGCCATCAAGC
TCGGTGTGGAATTCCGTTTCGGTCAGGACATCCAGCGCCTCGACTTCGCCGGTGACCGCATCAACGGCGTGTGGATCGAC
GGCAAGCTGGAAACCGCCGACCGCTACGTGCTGGCCCTCGGCAGCTACTCGCCGCAACTGCTCAAGCCGCTGGGCATCAA
GGCCCCGGTGTATCCGTTGAAGGGCTACTCGCTGACTGTGCCGATCACCAACCCGGCCATGGCCCCGACTTCGACCATTC
TCGACGAGACCTATAAGGTCGCGATCACCCGTTTCGACAACCGCATCCGCGTCGGCGGCATGGCGGAGATCGCCGGTTTT
GACCTGTCGCTCAACCCGCGTCGGCGCGAAACCCTGGAGATGATCGTCAACGACCTTTATCCTCAGGGCGGCAATCTGGC
CGAAGCGAGTTTCTGGACCGGCCTGCGTCCAACTACCCCGGATGGCACGCCGATCGTCGGCGCCACCCCGTTCAAGAACC
TGTTCCTGAACACCGGTCACGGCACCCTCGGCTGGACCATGGCGTGCGGTTCCGGTCGCTTGCTGGCCGACCTGATGGCG
AAGAAAAAGCCACAGATCAGCGCCGAAGGCCTCGATATTTCCCGTTATGGCAACACCACCCAGGAGTCCGCAAAGCATGG
CAATCCAGCGCCAGCTCACCAATGA

Upstream 100 bases:

>100_bases
CGCTTATACAGTGAAAAGCACTGGCAAATCTTTTTTACACTGCGCGCATCATTGCTCTGACAACACACATGCGCGGCACG
CCGCGATGAGGGATACAAAA

Downstream 100 bases:

>100_bases
GCGCATGAGTCAGATCGTCAGCCACAACGGTACGGTGTACCTGTCCGGGCAGGTCGGCGATGACTTCAACGCCGGTGTCG
AACAGCAGACCCGTGACGTA

Product: D-amino acid dehydrogenase small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MRVMVLGSGVIGTASAYYLARAGFEVVVVDRQPAAAMETSFANAGQVSPGYASPWAAPGVPLKAIKWLLQRHAPLAIKAT
ADIDQYLWMAQMLRNCTANRYAVNKERMVRLSEYSRDCLDELRAETGIAYEGRSLGTTQLFRTQAQLDNAAKDIAVLKES
GVPFEVLDRAGIARVEPALAGVTDILAGALRLPNDQTGDCQIFTTRLAEMAIKLGVEFRFGQDIQRLDFAGDRINGVWID
GKLETADRYVLALGSYSPQLLKPLGIKAPVYPLKGYSLTVPITNPAMAPTSTILDETYKVAITRFDNRIRVGGMAEIAGF
DLSLNPRRRETLEMIVNDLYPQGGNLAEASFWTGLRPTTPDGTPIVGATPFKNLFLNTGHGTLGWTMACGSGRLLADLMA
KKKPQISAEGLDISRYGNTTQESAKHGNPAPAHQ

Sequences:

>Translated_434_residues
MRVMVLGSGVIGTASAYYLARAGFEVVVVDRQPAAAMETSFANAGQVSPGYASPWAAPGVPLKAIKWLLQRHAPLAIKAT
ADIDQYLWMAQMLRNCTANRYAVNKERMVRLSEYSRDCLDELRAETGIAYEGRSLGTTQLFRTQAQLDNAAKDIAVLKES
GVPFEVLDRAGIARVEPALAGVTDILAGALRLPNDQTGDCQIFTTRLAEMAIKLGVEFRFGQDIQRLDFAGDRINGVWID
GKLETADRYVLALGSYSPQLLKPLGIKAPVYPLKGYSLTVPITNPAMAPTSTILDETYKVAITRFDNRIRVGGMAEIAGF
DLSLNPRRRETLEMIVNDLYPQGGNLAEASFWTGLRPTTPDGTPIVGATPFKNLFLNTGHGTLGWTMACGSGRLLADLMA
KKKPQISAEGLDISRYGNTTQESAKHGNPAPAHQ
>Mature_434_residues
MRVMVLGSGVIGTASAYYLARAGFEVVVVDRQPAAAMETSFANAGQVSPGYASPWAAPGVPLKAIKWLLQRHAPLAIKAT
ADIDQYLWMAQMLRNCTANRYAVNKERMVRLSEYSRDCLDELRAETGIAYEGRSLGTTQLFRTQAQLDNAAKDIAVLKES
GVPFEVLDRAGIARVEPALAGVTDILAGALRLPNDQTGDCQIFTTRLAEMAIKLGVEFRFGQDIQRLDFAGDRINGVWID
GKLETADRYVLALGSYSPQLLKPLGIKAPVYPLKGYSLTVPITNPAMAPTSTILDETYKVAITRFDNRIRVGGMAEIAGF
DLSLNPRRRETLEMIVNDLYPQGGNLAEASFWTGLRPTTPDGTPIVGATPFKNLFLNTGHGTLGWTMACGSGRLLADLMA
KKKPQISAEGLDISRYGNTTQESAKHGNPAPAHQ

Specific function: Oxidative deamination of D-amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=416, Percent_Identity=63.4615384615385, Blast_Score=548, Evalue=1e-157,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 47092; Mature: 47092

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVMVLGSGVIGTASAYYLARAGFEVVVVDRQPAAAMETSFANAGQVSPGYASPWAAPGV
CEEEEEECCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCC
PLKAIKWLLQRHAPLAIKATADIDQYLWMAQMLRNCTANRYAVNKERMVRLSEYSRDCLD
CHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHH
ELRAETGIAYEGRSLGTTQLFRTQAQLDNAAKDIAVLKESGVPFEVLDRAGIARVEPALA
HHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHH
GVTDILAGALRLPNDQTGDCQIFTTRLAEMAIKLGVEFRFGQDIQRLDFAGDRINGVWID
HHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHCCEEECCCCHHHHHCCCCCEEEEEEC
GKLETADRYVLALGSYSPQLLKPLGIKAPVYPLKGYSLTVPITNPAMAPTSTILDETYKV
CEECCCCEEEEEECCCCHHHHHCCCCCCCCEECCCCEEEEEECCCCCCCHHHHHHHHHEE
AITRFDNRIRVGGMAEIAGFDLSLNPRRRETLEMIVNDLYPQGGNLAEASFWTGLRPTTP
EEEEECCEEEECCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEECHHHCCCCCCCCC
DGTPIVGATPFKNLFLNTGHGTLGWTMACGSGRLLADLMAKKKPQISAEGLDISRYGNTT
CCCEEECCCCCCHHEEECCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCEEEHHCCCCC
QESAKHGNPAPAHQ
HHHHHCCCCCCCCC
>Mature Secondary Structure
MRVMVLGSGVIGTASAYYLARAGFEVVVVDRQPAAAMETSFANAGQVSPGYASPWAAPGV
CEEEEEECCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCC
PLKAIKWLLQRHAPLAIKATADIDQYLWMAQMLRNCTANRYAVNKERMVRLSEYSRDCLD
CHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHH
ELRAETGIAYEGRSLGTTQLFRTQAQLDNAAKDIAVLKESGVPFEVLDRAGIARVEPALA
HHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHH
GVTDILAGALRLPNDQTGDCQIFTTRLAEMAIKLGVEFRFGQDIQRLDFAGDRINGVWID
HHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHCCEEECCCCHHHHHCCCCCEEEEEEC
GKLETADRYVLALGSYSPQLLKPLGIKAPVYPLKGYSLTVPITNPAMAPTSTILDETYKV
CEECCCCEEEEEECCCCHHHHHCCCCCCCCEECCCCEEEEEECCCCCCCHHHHHHHHHEE
AITRFDNRIRVGGMAEIAGFDLSLNPRRRETLEMIVNDLYPQGGNLAEASFWTGLRPTTP
EEEEECCEEEECCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEECHHHCCCCCCCCC
DGTPIVGATPFKNLFLNTGHGTLGWTMACGSGRLLADLMAKKKPQISAEGLDISRYGNTT
CCCEEECCCCCCHHEEECCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCEEEHHCCCCC
QESAKHGNPAPAHQ
HHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]