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The map label for this gene is yjbQ [H]

Identifier: 77461725

GI number: 77461725

Start: 6169390

End: 6169815

Strand: Reverse

Name: yjbQ [H]

Synonym: Pfl01_5504

Alternate gene names: 77461725

Gene position: 6169815-6169390 (Counterclockwise)

Preceding gene: 77461726

Following gene: 77461724

Centisome position: 95.83

GC content: 60.56

Gene sequence:

>426_bases
ATGTGGCAACAGACTCTGATAACCCTGCGGGCACGGCCCCGGGGCTTTCATCTGGTGACCGACGAGTTGCTCGCCGGCCT
GCCTGAACTCAAGGCATGCCGGGTCGGTCTGTTGCATTTGTGGCTGCAGCATACCTCGGCGTCGTTGACCATCAACGAGA
ACGCCGATCCGGCGGTACGTCGCGACTTCGAACGATTTTTCAATCGTCTGATCCCACAAGGAGCAGACGGCTATGAGCAT
AACGACGAAGGCCTGGACGACCTCCCGGCGCACTTCAAGGCCAGCGTGCTGGGCTGTCAGATCAGTTTGCCGGTAACGGC
GGGCCGACTGGCACTGGGTACCTGGCAAGGCGTTTATCTGGGCGAGCACCGTGATCATGGCGGTGCCCGTAAAGTCCTCG
CCACCTTGCACGGTGAAGGGGCATAA

Upstream 100 bases:

>100_bases
GTTTTTCTGCGGCCAAAGGCTTACATCATTGAAGGAATATTAGGGCCTTTGTTTTTTTCCAGAGCGCGCTAGAATGCGCC
CCGAACGTGCGGAGAACTGT

Downstream 100 bases:

>100_bases
ACCGTTGGTCACCAATGGTTACCGATTTTTTTCCGGCGACTTTCGACAGTCGCCAAAGCTGGTCTATAACTAATCTGCTT
TTCGCAAGTCATGAGGTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MWQQTLITLRARPRGFHLVTDELLAGLPELKACRVGLLHLWLQHTSASLTINENADPAVRRDFERFFNRLIPQGADGYEH
NDEGLDDLPAHFKASVLGCQISLPVTAGRLALGTWQGVYLGEHRDHGGARKVLATLHGEGA

Sequences:

>Translated_141_residues
MWQQTLITLRARPRGFHLVTDELLAGLPELKACRVGLLHLWLQHTSASLTINENADPAVRRDFERFFNRLIPQGADGYEH
NDEGLDDLPAHFKASVLGCQISLPVTAGRLALGTWQGVYLGEHRDHGGARKVLATLHGEGA
>Mature_141_residues
MWQQTLITLRARPRGFHLVTDELLAGLPELKACRVGLLHLWLQHTSASLTINENADPAVRRDFERFFNRLIPQGADGYEH
NDEGLDDLPAHFKASVLGCQISLPVTAGRLALGTWQGVYLGEHRDHGGARKVLATLHGEGA

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

Organism=Escherichia coli, GI1790491, Length=139, Percent_Identity=58.9928057553957, Blast_Score=176, Evalue=5e-46,
Organism=Drosophila melanogaster, GI221476594, Length=137, Percent_Identity=52.5547445255474, Blast_Score=150, Evalue=2e-37,
Organism=Drosophila melanogaster, GI221476589, Length=137, Percent_Identity=52.5547445255474, Blast_Score=149, Evalue=6e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 15582; Mature: 15582

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWQQTLITLRARPRGFHLVTDELLAGLPELKACRVGLLHLWLQHTSASLTINENADPAVR
CCCCEEEEEECCCCCCEEEHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHH
RDFERFFNRLIPQGADGYEHNDEGLDDLPAHFKASVLGCQISLPVTAGRLALGTWQGVYL
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHEEEEEECCCCCCEEEECCCCCEEE
GEHRDHGGARKVLATLHGEGA
CCCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MWQQTLITLRARPRGFHLVTDELLAGLPELKACRVGLLHLWLQHTSASLTINENADPAVR
CCCCEEEEEECCCCCCEEEHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHH
RDFERFFNRLIPQGADGYEHNDEGLDDLPAHFKASVLGCQISLPVTAGRLALGTWQGVYL
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHEEEEEECCCCCCEEEECCCCCEEE
GEHRDHGGARKVLATLHGEGA
CCCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]