| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is dsbB2
Identifier: 77461704
GI number: 77461704
Start: 6150718
End: 6151269
Strand: Reverse
Name: dsbB2
Synonym: Pfl01_5483
Alternate gene names: 77461704
Gene position: 6151269-6150718 (Counterclockwise)
Preceding gene: 77461705
Following gene: 255961262
Centisome position: 95.54
GC content: 57.79
Gene sequence:
>552_bases ATGTCGTTGGCCTGCTCACGCTCCCTGTTCTTTATGGCTTTCACTGCGGGGATTCTAGCCCTGGGAGCTTCCTATTACCT CGAATACGCGGTTGGTCTGGTGCCCTGCAGTCTGTGCCTGGTCCAGCGCCTGTTCATGAGCGTTCTCACCTTGTGTTGTG GTTTGGCTGCGGTCCATGGTCCGCAGCGTGTCGGCCTGTCGCTGTATTGGATGGTGACGTTACTGAGCAGTCTCGGCGGC ACGACGGCGGCGTGGCGGCAGGTGTTATTTCAAAGCGATTCACTGCAGGAACTGGCGCACTGTGCGCCCAATCCAGAAGA AATGTTCAGCAGTCTGCCGTGGTTATGCGCGCTGATGCGGATGTTCAACGACACTGCCGATTGCGCGGAATTGTCCTGGA CGCTGTTCGATCTGAGCATTCCGGAGTGGAGTCTGCTGTTTTTCGTGGGGATGTCGATCCTCGCCGTTTACCAGTTATTG CGACAGGTCTGGATGGCTTTGCAGCGACCACTCAGCGGCCAACCGTCGCACCCGGCGCTGGTCAGGGATTAA
Upstream 100 bases:
>100_bases TTCCCTACACCTCTGGTGAAGTGTCGCCATTACCCTGTCTTGAAAGCCCGAGGCCCTTTCCTCTACCGTAACTGCCTGTC TTTATTGTTACGGATAAGCC
Downstream 100 bases:
>100_bases ACACTTGTATGAACTTTCTCTCCTGCGTACCTTGAAGCCATAGGCGTGCGGGCATAATCTGGCCCGCACGTGTCATTGGA ATTGTGTTGCTCGATGACGC
Product: disulfide bond formation protein DsbB
Products: NA
Alternate protein names: Disulfide oxidoreductase 2
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MSLACSRSLFFMAFTAGILALGASYYLEYAVGLVPCSLCLVQRLFMSVLTLCCGLAAVHGPQRVGLSLYWMVTLLSSLGG TTAAWRQVLFQSDSLQELAHCAPNPEEMFSSLPWLCALMRMFNDTADCAELSWTLFDLSIPEWSLLFFVGMSILAVYQLL RQVWMALQRPLSGQPSHPALVRD
Sequences:
>Translated_183_residues MSLACSRSLFFMAFTAGILALGASYYLEYAVGLVPCSLCLVQRLFMSVLTLCCGLAAVHGPQRVGLSLYWMVTLLSSLGG TTAAWRQVLFQSDSLQELAHCAPNPEEMFSSLPWLCALMRMFNDTADCAELSWTLFDLSIPEWSLLFFVGMSILAVYQLL RQVWMALQRPLSGQPSHPALVRD >Mature_182_residues SLACSRSLFFMAFTAGILALGASYYLEYAVGLVPCSLCLVQRLFMSVLTLCCGLAAVHGPQRVGLSLYWMVTLLSSLGGT TAAWRQVLFQSDSLQELAHCAPNPEEMFSSLPWLCALMRMFNDTADCAELSWTLFDLSIPEWSLLFFVGMSILAVYQLLR QVWMALQRPLSGQPSHPALVRD
Specific function: Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
COG id: COG1495
COG function: function code O; Disulfide bond formation protein DsbB
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DsbB family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DSBB2_PSEPF (Q3K4T4)
Other databases:
- EMBL: CP000094 - RefSeq: YP_351211.1 - ProteinModelPortal: Q3K4T4 - STRING: Q3K4T4 - GeneID: 3713807 - GenomeReviews: CP000094_GR - KEGG: pfo:Pfl01_5483 - eggNOG: COG1495 - HOGENOM: HBG637909 - OMA: TLPEWSL - BioCyc: PFLU205922:PFL_5483-MONOMER - GO: GO:0006810 - HAMAP: MF_00286 - InterPro: IPR003752 - InterPro: IPR022920
Pfam domain/function: PF02600 DsbB
EC number: NA
Molecular weight: Translated: 20284; Mature: 20153
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x15ab1044)-; HASH(0x167eea80)-; HASH(0x15bf06a8)-; HASH(0x168b0e60)-;
Cys/Met content:
4.4 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 9.3 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 8.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLACSRSLFFMAFTAGILALGASYYLEYAVGLVPCSLCLVQRLFMSVLTLCCGLAAVHG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PQRVGLSLYWMVTLLSSLGGTTAAWRQVLFQSDSLQELAHCAPNPEEMFSSLPWLCALMR HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHCHHHHHHHH MFNDTADCAELSWTLFDLSIPEWSLLFFVGMSILAVYQLLRQVWMALQRPLSGQPSHPAL HHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC VRD CCH >Mature Secondary Structure SLACSRSLFFMAFTAGILALGASYYLEYAVGLVPCSLCLVQRLFMSVLTLCCGLAAVHG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PQRVGLSLYWMVTLLSSLGGTTAAWRQVLFQSDSLQELAHCAPNPEEMFSSLPWLCALMR HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHCHHHHHHHH MFNDTADCAELSWTLFDLSIPEWSLLFFVGMSILAVYQLLRQVWMALQRPLSGQPSHPAL HHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC VRD CCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA