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The map label for this gene is ubiD [H]

Identifier: 77461675

GI number: 77461675

Start: 6119491

End: 6120957

Strand: Reverse

Name: ubiD [H]

Synonym: Pfl01_5454

Alternate gene names: 77461675

Gene position: 6120957-6119491 (Counterclockwise)

Preceding gene: 77461676

Following gene: 77461674

Centisome position: 95.07

GC content: 61.55

Gene sequence:

>1467_bases
ATGAAATTCAAGGATCTTCGGGATTTCGTGCAGCAGCTTGAGCAGCGCGGAGAGTTGAAACGCATCCAGATTCCCGTCTC
GCCGGTGCTGGAAATGACCGAGGTGTGCGACCGCACGTTGCGGGCCAAGGGCCCGGCGTTGCTGTTCGAAAAACCGACCG
GCTATGACATTCCGGTGCTTGGCAACCTGTTCGGCACGCCCGAGCGGGTCGCCATGGGCATGGGTGCCGAGTCGGTCAGC
GAGCTGCGCGAAATCGGCAAGCTGCTGGCGTTCCTCAAGGAACCTGAGCCGCCGAAGGGCTTGAAAGACGCGTGGTCGAA
GCTGCCGATCTTCCGCAAGATCATCGCGATGGCGCCGAAAGTCATCAAAGACGCACCGTGCCAGGAAGTGGTCATCGAAG
GCGACGACGTCGATCTGGCGATGCTGCCGGTGCAGACCTGCTGGTCGGGCGACGTGGCGCCGCTGATCACCTGGGGCCTG
ACCGTCACCAAAGGTCCGAACAAGGATCGGCAGAACCTCGGCATCTACCGTCAGCAAGTGATCGGCCGCAACAAGGTCAT
CATGCGCTGGCTCAGCCACCGTGGCGGTGCGCTGGATTTCCGTGAGTGGTGCGAGAAGCATCCGGGCCAGCCGTTCCCGG
TGTCCGTGGCTCTTGGCGCGGATCCTGCGACCATTCTTGGCGCGGTGACGCCGGTACCGGACAGCCTCTCCGAATATGCC
TTCGCCGGTCTGCTGCGCGACAGCCGCACGGAGCTGGTGAAGTGCCGTGGCAACGACCTGCAAGTGCCGGCGACTGCCGA
AATCATTCTCGAAGGCGTGATTCATCCGGGTGAAATGGCCGATGAAGGCCCGTACGGCGATCACACCGGTTACTACAACG
AAGTCGACAGCTTCCCGGTGTTCACCGTCGAGCGCATCACCCACCGGATCAAGCCGATCTACCACAGCACCTACACCGGC
CGTCCGCCGGATGAGCCGGCGATTCTCGGTGTGGCACTGAATGAAGTGTTCGTGCCGATCCTGCAGAAGCAGTTCCCGGA
GATCACCGACTTCTACCTGCCGCCGGAAGGCTGCTCGTACCGCATGGCCGTGGTGACGATGAAGAAGTCGTATCCGGGCC
ACGCCAAGCGCGTGATGCTGGGTGTCTGGTCGTTTTTGCGACAGTTCATGTACACCAAGTTCGTTATTGTCACCGACGAC
GACATCAACGCGCGGGACTGGAACGACGTGATCTGGGCCATCACCACGCGCATGGACCCCAAGCGCGACACGGTGATGAT
CGACAATACGCCGATCGACTACCTCGACTTCGCTTCGCCGGTGTCGGGGCTCGGCTCGAAGATGGGCCTGGACGCCACCC
ACAAGTGGCCGGGCGAAACCACTCGCGAGTGGGGCCGCGTCATCGTCAAGGATGACGCCGTCACCCAACGGATCGATGCC
ATCTGGAATCAGTTAGGAATAGATTGA

Upstream 100 bases:

>100_bases
TGGAAAAGGTCAGGCGAATGCAGCCAAGTAAGCAGTGACGGGCTGCCAGCGACCGGCATAGCAGGTAGGATGTACGCCTA
TTTTGAGGGTGCCATCGTCA

Downstream 100 bases:

>100_bases
TGCGTGTAACCCTGCAGCCCTCCGGAGCGGTGCTCGAGATACAGCCCGGAGAGCGGATTCTCGATGGCGCGCGGCGCCTG
GGCTACGAATGCCCGCGAAG

Product: 3-octaprenyl-4hydroxybenzoate decarboxylase

Products: NA

Alternate protein names: Polyprenyl p-hydroxybenzoate decarboxylase [H]

Number of amino acids: Translated: 488; Mature: 488

Protein sequence:

>488_residues
MKFKDLRDFVQQLEQRGELKRIQIPVSPVLEMTEVCDRTLRAKGPALLFEKPTGYDIPVLGNLFGTPERVAMGMGAESVS
ELREIGKLLAFLKEPEPPKGLKDAWSKLPIFRKIIAMAPKVIKDAPCQEVVIEGDDVDLAMLPVQTCWSGDVAPLITWGL
TVTKGPNKDRQNLGIYRQQVIGRNKVIMRWLSHRGGALDFREWCEKHPGQPFPVSVALGADPATILGAVTPVPDSLSEYA
FAGLLRDSRTELVKCRGNDLQVPATAEIILEGVIHPGEMADEGPYGDHTGYYNEVDSFPVFTVERITHRIKPIYHSTYTG
RPPDEPAILGVALNEVFVPILQKQFPEITDFYLPPEGCSYRMAVVTMKKSYPGHAKRVMLGVWSFLRQFMYTKFVIVTDD
DINARDWNDVIWAITTRMDPKRDTVMIDNTPIDYLDFASPVSGLGSKMGLDATHKWPGETTREWGRVIVKDDAVTQRIDA
IWNQLGID

Sequences:

>Translated_488_residues
MKFKDLRDFVQQLEQRGELKRIQIPVSPVLEMTEVCDRTLRAKGPALLFEKPTGYDIPVLGNLFGTPERVAMGMGAESVS
ELREIGKLLAFLKEPEPPKGLKDAWSKLPIFRKIIAMAPKVIKDAPCQEVVIEGDDVDLAMLPVQTCWSGDVAPLITWGL
TVTKGPNKDRQNLGIYRQQVIGRNKVIMRWLSHRGGALDFREWCEKHPGQPFPVSVALGADPATILGAVTPVPDSLSEYA
FAGLLRDSRTELVKCRGNDLQVPATAEIILEGVIHPGEMADEGPYGDHTGYYNEVDSFPVFTVERITHRIKPIYHSTYTG
RPPDEPAILGVALNEVFVPILQKQFPEITDFYLPPEGCSYRMAVVTMKKSYPGHAKRVMLGVWSFLRQFMYTKFVIVTDD
DINARDWNDVIWAITTRMDPKRDTVMIDNTPIDYLDFASPVSGLGSKMGLDATHKWPGETTREWGRVIVKDDAVTQRIDA
IWNQLGID
>Mature_488_residues
MKFKDLRDFVQQLEQRGELKRIQIPVSPVLEMTEVCDRTLRAKGPALLFEKPTGYDIPVLGNLFGTPERVAMGMGAESVS
ELREIGKLLAFLKEPEPPKGLKDAWSKLPIFRKIIAMAPKVIKDAPCQEVVIEGDDVDLAMLPVQTCWSGDVAPLITWGL
TVTKGPNKDRQNLGIYRQQVIGRNKVIMRWLSHRGGALDFREWCEKHPGQPFPVSVALGADPATILGAVTPVPDSLSEYA
FAGLLRDSRTELVKCRGNDLQVPATAEIILEGVIHPGEMADEGPYGDHTGYYNEVDSFPVFTVERITHRIKPIYHSTYTG
RPPDEPAILGVALNEVFVPILQKQFPEITDFYLPPEGCSYRMAVVTMKKSYPGHAKRVMLGVWSFLRQFMYTKFVIVTDD
DINARDWNDVIWAITTRMDPKRDTVMIDNTPIDYLDFASPVSGLGSKMGLDATHKWPGETTREWGRVIVKDDAVTQRIDA
IWNQLGID

Specific function: Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol [H]

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=487, Percent_Identity=77.0020533880903, Blast_Score=796, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6320748, Length=447, Percent_Identity=24.3847874720358, Blast_Score=120, Evalue=4e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: 4.1.1.-

Molecular weight: Translated: 54719; Mature: 54719

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFKDLRDFVQQLEQRGELKRIQIPVSPVLEMTEVCDRTLRAKGPALLFEKPTGYDIPVL
CCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
GNLFGTPERVAMGMGAESVSELREIGKLLAFLKEPEPPKGLKDAWSKLPIFRKIIAMAPK
CCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCHHHHHHHHHCHH
VIKDAPCQEVVIEGDDVDLAMLPVQTCWSGDVAPLITWGLTVTKGPNKDRQNLGIYRQQV
HHHCCCCCCEEEECCCCCEEEECHHHCCCCCCHHHHHCCEEEECCCCCCHHHHHHHHHHH
IGRNKVIMRWLSHRGGALDFREWCEKHPGQPFPVSVALGADPATILGAVTPVPDSLSEYA
HCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCEEEEECCCCHHHHCCCCCCCCHHHHHH
FAGLLRDSRTELVKCRGNDLQVPATAEIILEGVIHPGEMADEGPYGDHTGYYNEVDSFPV
HHHHHHHCHHHHEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
FTVERITHRIKPIYHSTYTGRPPDEPAILGVALNEVFVPILQKQFPEITDFYLPPEGCSY
HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCHHCCCCCCCCCCE
RMAVVTMKKSYPGHAKRVMLGVWSFLRQFMYTKFVIVTDDDINARDWNDVIWAITTRMDP
EEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCEEEEEEECCCC
KRDTVMIDNTPIDYLDFASPVSGLGSKMGLDATHKWPGETTREWGRVIVKDDAVTQRIDA
CCCEEEECCCCCCHHHHHCHHHHCCHHCCCCCCCCCCCCCHHHHCEEEEECHHHHHHHHH
IWNQLGID
HHHHHCCC
>Mature Secondary Structure
MKFKDLRDFVQQLEQRGELKRIQIPVSPVLEMTEVCDRTLRAKGPALLFEKPTGYDIPVL
CCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
GNLFGTPERVAMGMGAESVSELREIGKLLAFLKEPEPPKGLKDAWSKLPIFRKIIAMAPK
CCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCHHHHHHHHHCHH
VIKDAPCQEVVIEGDDVDLAMLPVQTCWSGDVAPLITWGLTVTKGPNKDRQNLGIYRQQV
HHHCCCCCCEEEECCCCCEEEECHHHCCCCCCHHHHHCCEEEECCCCCCHHHHHHHHHHH
IGRNKVIMRWLSHRGGALDFREWCEKHPGQPFPVSVALGADPATILGAVTPVPDSLSEYA
HCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCEEEEECCCCHHHHCCCCCCCCHHHHHH
FAGLLRDSRTELVKCRGNDLQVPATAEIILEGVIHPGEMADEGPYGDHTGYYNEVDSFPV
HHHHHHHCHHHHEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
FTVERITHRIKPIYHSTYTGRPPDEPAILGVALNEVFVPILQKQFPEITDFYLPPEGCSY
HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCHHCCCCCCCCCCE
RMAVVTMKKSYPGHAKRVMLGVWSFLRQFMYTKFVIVTDDDINARDWNDVIWAITTRMDP
EEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCEEEEEEECCCC
KRDTVMIDNTPIDYLDFASPVSGLGSKMGLDATHKWPGETTREWGRVIVKDDAVTQRIDA
CCCEEEECCCCCCHHHHHCHHHHCCHHCCCCCCCCCCCCCHHHHCEEEEECHHHHHHHHH
IWNQLGID
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA