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The map label for this gene is copD [H]

Identifier: 77460035

GI number: 77460035

Start: 4313858

End: 4314721

Strand: Direct

Name: copD [H]

Synonym: Pfl01_3813

Alternate gene names: 77460035

Gene position: 4313858-4314721 (Clockwise)

Preceding gene: 77460034

Following gene: 77460036

Centisome position: 67.0

GC content: 64.12

Gene sequence:

>864_bases
ATGGCTGAACTGATCAACATCCTCCTGCGTCTGGCGCTGTATGTGGATTTGCTGCTGTTGTTCGGGCTGGCGTTGTTCGG
GCTGTACAGCGTTGATGCGGTGCTGCGGTTTCGGCCGATGCTGCGCGGGATGGCGTTGATCGGGGCGCTGCTGTCAGTGG
CGGGACTGGTGCTGATGACCCGCGCCATGAGTGGCGAAACGGAGTTCGCGGCGCTGTGGCCGCACCTGCAAATGATGCTG
TTTGAAACCGATGTCGGGACGGCATGGGCGGTGCGGATGATTGCGCTGAGCATCGTGATGCTCTGGCCGGGGTTTTGGCT
GGCGTCGATCGCCGGTGCTCTCGCCCTCGCCTCTCTGGCCTGGAGCGGACACGGCGCGATGGATGGCGCCTGGCACCTGC
TCAGCGACATTCTGCACCTGCTCGCGGCGGGTGCATGGATGGGCGCGATGTTGGCGCTGATCTTGATGTCGCGGCTCGAT
GCGCTGTTCTGCGAAGCGCGTATTCGTTCGCTGGCCGGTGCCGTCAAACGTTTCGAAGGCGTGGGCGCGGCGATCGTGAT
CGTCCTCTCGGTGACCGGCGTGCTGAACTACCTGTTCGTCGTCGGCCCGACACTGGACGAGGTCTTGCTCCGCAGCTACG
GGATGCTGCTGGCGATCAAGGTTGTGCTGTTCGCCGGCATGCTGGTTTTAGCGGCGTTGAACCGCTTTCACCTCGGCCCG
CTGCTGGAGCAATCGTTGCGCGACGGTCAACACCCAGTCGCGGCCAATGCTCTGCGGCGCAGTGTTGCAGTGGAGCTGGG
CATCGCGCTGTTGATCGTGGCGCTGGTGGCGTGGCTGGGCACACTTGGGCCGGACGCGGGATGA

Upstream 100 bases:

>100_bases
CGCACCTCTGCCGGCCGGCACCTACAAGGTCGAATGGCGCGCGGTGTCATCGGACACGCACCCGATCACCGGCAACGTCA
CGTTCAAAGTGAAGTGAGCG

Downstream 100 bases:

>100_bases
CACCCGGCAAACCCATTCACTACACTGGCCCGCACCTCCACTGCACAAGCCCGATCTCCATGACAATTCGAAAAAGCACG
ATGATCTTCTGCGGCCTGCT

Product: copper resistance D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MAELINILLRLALYVDLLLLFGLALFGLYSVDAVLRFRPMLRGMALIGALLSVAGLVLMTRAMSGETEFAALWPHLQMML
FETDVGTAWAVRMIALSIVMLWPGFWLASIAGALALASLAWSGHGAMDGAWHLLSDILHLLAAGAWMGAMLALILMSRLD
ALFCEARIRSLAGAVKRFEGVGAAIVIVLSVTGVLNYLFVVGPTLDEVLLRSYGMLLAIKVVLFAGMLVLAALNRFHLGP
LLEQSLRDGQHPVAANALRRSVAVELGIALLIVALVAWLGTLGPDAG

Sequences:

>Translated_287_residues
MAELINILLRLALYVDLLLLFGLALFGLYSVDAVLRFRPMLRGMALIGALLSVAGLVLMTRAMSGETEFAALWPHLQMML
FETDVGTAWAVRMIALSIVMLWPGFWLASIAGALALASLAWSGHGAMDGAWHLLSDILHLLAAGAWMGAMLALILMSRLD
ALFCEARIRSLAGAVKRFEGVGAAIVIVLSVTGVLNYLFVVGPTLDEVLLRSYGMLLAIKVVLFAGMLVLAALNRFHLGP
LLEQSLRDGQHPVAANALRRSVAVELGIALLIVALVAWLGTLGPDAG
>Mature_286_residues
AELINILLRLALYVDLLLLFGLALFGLYSVDAVLRFRPMLRGMALIGALLSVAGLVLMTRAMSGETEFAALWPHLQMMLF
ETDVGTAWAVRMIALSIVMLWPGFWLASIAGALALASLAWSGHGAMDGAWHLLSDILHLLAAGAWMGAMLALILMSRLDA
LFCEARIRSLAGAVKRFEGVGAAIVIVLSVTGVLNYLFVVGPTLDEVLLRSYGMLLAIKVVLFAGMLVLAALNRFHLGPL
LEQSLRDGQHPVAANALRRSVAVELGIALLIVALVAWLGTLGPDAG

Specific function: Exact function not known. Involved in copper resistance. Appears to be involved in copper uptake in conjunction with CopC [H]

COG id: COG1276

COG function: function code P; Putative copper export protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CopD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008457 [H]

Pfam domain/function: PF05425 CopD [H]

EC number: NA

Molecular weight: Translated: 30665; Mature: 30533

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELINILLRLALYVDLLLLFGLALFGLYSVDAVLRFRPMLRGMALIGALLSVAGLVLMT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAMSGETEFAALWPHLQMMLFETDVGTAWAVRMIALSIVMLWPGFWLASIAGALALASLA
HHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WSGHGAMDGAWHLLSDILHLLAAGAWMGAMLALILMSRLDALFCEARIRSLAGAVKRFEG
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
VGAAIVIVLSVTGVLNYLFVVGPTLDEVLLRSYGMLLAIKVVLFAGMLVLAALNRFHLGP
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
LLEQSLRDGQHPVAANALRRSVAVELGIALLIVALVAWLGTLGPDAG
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AELINILLRLALYVDLLLLFGLALFGLYSVDAVLRFRPMLRGMALIGALLSVAGLVLMT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAMSGETEFAALWPHLQMMLFETDVGTAWAVRMIALSIVMLWPGFWLASIAGALALASLA
HHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WSGHGAMDGAWHLLSDILHLLAAGAWMGAMLALILMSRLDALFCEARIRSLAGAVKRFEG
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
VGAAIVIVLSVTGVLNYLFVVGPTLDEVLLRSYGMLLAIKVVLFAGMLVLAALNRFHLGP
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
LLEQSLRDGQHPVAANALRRSVAVELGIALLIVALVAWLGTLGPDAG
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA