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The map label for this gene is yejB [H]

Identifier: 77459964

GI number: 77459964

Start: 4230324

End: 4231388

Strand: Direct

Name: yejB [H]

Synonym: Pfl01_3742

Alternate gene names: 77459964

Gene position: 4230324-4231388 (Clockwise)

Preceding gene: 77459963

Following gene: 77459965

Centisome position: 65.7

GC content: 61.97

Gene sequence:

>1065_bases
ATGTGGCGTTATCTGAGTCGACGTCTGTTGCTGATCATCCCGACGCTGCTGTGCATTCTGGTGGTCAACTTCGTCATCGT
GCAGGCCGCGCCCGGCGGCCCGGTGGAACAAGCCATCGCCCGCCTGCAAGGCTTCGGCGGGCACAGCATGGGCGGCGCCA
GCGAGGTCACCGCGATCGGCGGTGCCGGGCGCAGCAGCCGAGGCCTGGACCCGGCGCTGATCGAAGAGATCAAGCATCAC
TACGGCTTCGACAAGCCGATGCACGAACGCCTGTGGCTGATGCTCAAGAACTACGCGCAACTGGACCTGGGCAGCAGCTT
CTTTCGCGGTGCGAAGGTGACGGATCTGATCGTGCAGAAGCTGCCGGTGTCGCTGTCCCTTGGCCTGTGGGCAACCTTGA
TCACCTACCTGATCTCGATCCCGCTGGGCATTCGCAAGGCAATCAAAAACGGTAGCGCGTTCGATGTCTGGAGCAGTACG
GCGATCATCGTCGGTTACGCGATGCCGGCGTTTCTGTTCGCGATTCTGTTGATCGTGGTGTTCGCCGGGGGCAGCTACGT
CAACTGGTTTCCGGTGCAGGGCCTGGTTTCGGACAATTTCGACAGCCTGAGCCTGTGGGGCAAGGTCGGCGACTACCTCT
GGCACCTGGTGTTGCCGGTGACGGCGCTGGTGATCGGCGGTTTTGCGACGCTGACGATCCTGACCAAAAACAGCTTCCTC
AACGAGATCAGCCGCCAGTACGTGATCACCGCGCGCGCCAAGGGCCTGACCGAAAGGCGCGTGCTCTACGGCCATGTGTT
TCGCAACGCAATGCTGCTGGTGGTGGCCGGAGTGCCATCGGCATTGATCGAGGTGTTTTTCGCCGGCTCGCTGCTGATCG
AAACCATCTTCAACCTCGACGGCCTCGGGCGCATGAGCTACGAAGCGGCGGTGTCGCGGGACTACCCGGTGGTGTTCGGC
ACGCTGTTTCTGTTCACCCTGTTCGGCCTGTTGATCAAGCTGATCGGCGACCTCTGCTACACCCTGCTCGACCCGCGCAT
CGACTTCTCGGCGAGGACTGCCTGA

Upstream 100 bases:

>100_bases
ATCTACAGCGAAGGCCTCGATACCTGGTGGGAGGTCTCGGCCAAGCCGCTGACCAACCAGCAGATGAGCGCCCTGCGCCA
GCTCGCGGGGGGCCAGTGAC

Downstream 100 bases:

>100_bases
TGTTCACACTCTCCCCTCTGGGCCGGCGGCGCATCGCCCAATTCAAGGCCAACCGTCGCGGGCGCTGGTCGCTGTGGCTG
TTCATCGGGCTGTGCCTGAT

Product: binding-protein dependent transport system inner membrane protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MWRYLSRRLLLIIPTLLCILVVNFVIVQAAPGGPVEQAIARLQGFGGHSMGGASEVTAIGGAGRSSRGLDPALIEEIKHH
YGFDKPMHERLWLMLKNYAQLDLGSSFFRGAKVTDLIVQKLPVSLSLGLWATLITYLISIPLGIRKAIKNGSAFDVWSST
AIIVGYAMPAFLFAILLIVVFAGGSYVNWFPVQGLVSDNFDSLSLWGKVGDYLWHLVLPVTALVIGGFATLTILTKNSFL
NEISRQYVITARAKGLTERRVLYGHVFRNAMLLVVAGVPSALIEVFFAGSLLIETIFNLDGLGRMSYEAAVSRDYPVVFG
TLFLFTLFGLLIKLIGDLCYTLLDPRIDFSARTA

Sequences:

>Translated_354_residues
MWRYLSRRLLLIIPTLLCILVVNFVIVQAAPGGPVEQAIARLQGFGGHSMGGASEVTAIGGAGRSSRGLDPALIEEIKHH
YGFDKPMHERLWLMLKNYAQLDLGSSFFRGAKVTDLIVQKLPVSLSLGLWATLITYLISIPLGIRKAIKNGSAFDVWSST
AIIVGYAMPAFLFAILLIVVFAGGSYVNWFPVQGLVSDNFDSLSLWGKVGDYLWHLVLPVTALVIGGFATLTILTKNSFL
NEISRQYVITARAKGLTERRVLYGHVFRNAMLLVVAGVPSALIEVFFAGSLLIETIFNLDGLGRMSYEAAVSRDYPVVFG
TLFLFTLFGLLIKLIGDLCYTLLDPRIDFSARTA
>Mature_354_residues
MWRYLSRRLLLIIPTLLCILVVNFVIVQAAPGGPVEQAIARLQGFGGHSMGGASEVTAIGGAGRSSRGLDPALIEEIKHH
YGFDKPMHERLWLMLKNYAQLDLGSSFFRGAKVTDLIVQKLPVSLSLGLWATLITYLISIPLGIRKAIKNGSAFDVWSST
AIIVGYAMPAFLFAILLIVVFAGGSYVNWFPVQGLVSDNFDSLSLWGKVGDYLWHLVLPVTALVIGGFATLTILTKNSFL
NEISRQYVITARAKGLTERRVLYGHVFRNAMLLVVAGVPSALIEVFFAGSLLIETIFNLDGLGRMSYEAAVSRDYPVVFG
TLFLFTLFGLLIKLIGDLCYTLLDPRIDFSARTA

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4174

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788504, Length=364, Percent_Identity=61.2637362637363, Blast_Score=448, Evalue=1e-127,
Organism=Escherichia coli, GI1789965, Length=363, Percent_Identity=33.0578512396694, Blast_Score=160, Evalue=9e-41,
Organism=Escherichia coli, GI1787497, Length=350, Percent_Identity=28, Blast_Score=142, Evalue=3e-35,
Organism=Escherichia coli, GI1787053, Length=350, Percent_Identity=30, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1789888, Length=347, Percent_Identity=27.6657060518732, Blast_Score=117, Evalue=8e-28,
Organism=Escherichia coli, GI1787761, Length=360, Percent_Identity=26.3888888888889, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1787550, Length=260, Percent_Identity=21.9230769230769, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 38794; Mature: 38794

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWRYLSRRLLLIIPTLLCILVVNFVIVQAAPGGPVEQAIARLQGFGGHSMGGASEVTAIG
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEC
GAGRSSRGLDPALIEEIKHHYGFDKPMHERLWLMLKNYAQLDLGSSFFRGAKVTDLIVQK
CCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHH
LPVSLSLGLWATLITYLISIPLGIRKAIKNGSAFDVWSSTAIIVGYAMPAFLFAILLIVV
CCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHH
FAGGSYVNWFPVQGLVSDNFDSLSLWGKVGDYLWHLVLPVTALVIGGFATLTILTKNSFL
HCCCCEEEEEECCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHH
NEISRQYVITARAKGLTERRVLYGHVFRNAMLLVVAGVPSALIEVFFAGSLLIETIFNLD
HHHHHHEEEEHHHCCCHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHCCC
GLGRMSYEAAVSRDYPVVFGTLFLFTLFGLLIKLIGDLCYTLLDPRIDFSARTA
CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MWRYLSRRLLLIIPTLLCILVVNFVIVQAAPGGPVEQAIARLQGFGGHSMGGASEVTAIG
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEC
GAGRSSRGLDPALIEEIKHHYGFDKPMHERLWLMLKNYAQLDLGSSFFRGAKVTDLIVQK
CCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHH
LPVSLSLGLWATLITYLISIPLGIRKAIKNGSAFDVWSSTAIIVGYAMPAFLFAILLIVV
CCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHH
FAGGSYVNWFPVQGLVSDNFDSLSLWGKVGDYLWHLVLPVTALVIGGFATLTILTKNSFL
HCCCCEEEEEECCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHH
NEISRQYVITARAKGLTERRVLYGHVFRNAMLLVVAGVPSALIEVFFAGSLLIETIFNLD
HHHHHHEEEEHHHCCCHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHCCC
GLGRMSYEAAVSRDYPVVFGTLFLFTLFGLLIKLIGDLCYTLLDPRIDFSARTA
CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]