Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is yejA [C]

Identifier: 77459963

GI number: 77459963

Start: 4228451

End: 4230322

Strand: Direct

Name: yejA [C]

Synonym: Pfl01_3741

Alternate gene names: 77459963

Gene position: 4228451-4230322 (Clockwise)

Preceding gene: 77459962

Following gene: 77459964

Centisome position: 65.68

GC content: 63.51

Gene sequence:

>1872_bases
ATGACATTCATGCGCAACATGGCCGGCCTGCTGCTCGGCAGCGCGCTGCTGTGCAACGCGGCAGCTGCGCTGGCCGGCGG
CAGCTACGCGATGACGGTGTACGGCGAGGCGCCGAAATACCCCGCCGGTTTCCAGCACTTCGATTTCGTCAATCCCGACG
CCCCCAAGGGTGGCTCGCTCAGCCGCGCTTCGATGGAGATCGGTCAGTACAACTACATCACCCCGTATGCCGATCAGGGC
ATTTCCGTGGTGCAGGTCAACGACTGGGTGTATTCGCCGCTGGCGTTCCGCTCGCTGGACGAGCCCTACACCGTCTACGG
TCTGGTGGCGCAAACCATGGAGCGCGATCCCGACGGTCTGTGGGTGCGTTTCAACCTGAATCCCGAGGCGCGTTTCGCCG
ATGGCACGCCGATCACCGCCGAGGACGTGCGCTACACCTTCGAACTGTTGATGACCAAGGGCAGCCTGAGTTATCGCCAG
CAATACGCCGACGTGCAGGACGTGCTGATCGAAGGCCCGCGGCAGATTCGCTTCACCTTCAAGAACAACCTCAACCGCAC
CCTGGCGCTGGATCTGGCGTCGCTGCGACCGGTGCCCGAGCACTGGTGGAAAACCCGCGACTTCGCCAACGGCGGCGGCT
TCGAGCCTCCGCTGGGCAGCGGCCCGTACCGGGTGAGCAAGGTGGACGCAGGACGCAGCATCAGTTTTCAGAGAGATCCC
CACTGGTGGGGCAAAGACCTGCCGGTCAGTCGCGGGATGTACAACTTCGACAGCCTGACCGTGAATTTCTACGGCGACAC
CGATGTCGCCCGACAATTGCTGCAGGCCGGCGCGTTCGACTACAACCGCGAGTTTTCCTCGTCCGGCTACGTGGTCGGCT
ACGACAGCCCGGCCCTGCGCGACGGTCGCCTGCAACAGGCAATTCTCGCTCCGGACAAACCGACCTGCGCCCAGGGTTTC
GTGTTCAACCTGCAGAATCCGCTGTTCAAGGATCGCCGCGTGCGTCAGGCGCTGAGCCTGCTGTGGGATTTCGAGTGGAC
CAACAAGCAGATGATGCGCGGCTTCTACGTACGCCAGAACAGCTACTGGCCGAAGAGTGAAATGGCCGCCACCGCACTGC
CCGACGCCGGGGAGCTGGCGATCCTCGAACCGCTGCGCGGACAGATTCCGGACGAGGTTTTCAGCCGGGTCTATCAGGCG
CCGAAAACCGATGGCAGCGGCTACATTCGCGACAAGCAGTTGCAGGCCCTGAAGCTGTTGGCCGAGGCCGGATGGACGCC
GAAAAACAACCGACTGGTGAACGCCGCCGGCGAGCCCTTCGAATTCACCTTCCTCGACGGCCAGGGCGGCTTCGACCGCA
TGCTGCTGCCGTACAAACGCACCCTGGCGCAGATCGGCATCACCCTGAATCTGCGACGTATCGATTCGGCGCAATACATC
AACCGGCTCAACGCCCGGGACTACGACATGATCGTCACCAGTTTCCCGCGCAGCGGCGATCCGATCGTCTCGCCGGGCCG
CGAGTTGTACAGCCTGTATGCCTCACAGAGCGCCACACAAGTCGGCAGCTCCAATTCGATGGTGCTGGCCGATCCTGCGG
TTGACCGGCTGATCGACGGCCTGGTCCAGGCCAATACCCGCGACGCCATGGTGCGTTACGCCCGCGCCCTCGACCGGGTG
CTGCAATGGGGTGACTACATGATTCCCAACTACTACTCCAAAGGCACGCCGACGGTGTTTCAGAACCGCTTCGGCAGGCC
GCCGGTGCAGCCGATCTACAGCGAAGGCCTCGATACCTGGTGGGAGGTCTCGGCCAAGCCGCTGACCAACCAGCAGATGA
GCGCCCTGCGCCAGCTCGCGGGGGGCCAGTGA

Upstream 100 bases:

>100_bases
GGGCCGCGCAAGACTCCGGCCGGCCCCTTCCCCTTGCGAATTCGCATCCCGCAGCGGCCAGCCGCCGCTCCGGGCTTTTC
CCGCTCAGAGGAACGACTTC

Downstream 100 bases:

>100_bases
CATGTGGCGTTATCTGAGTCGACGTCTGTTGCTGATCATCCCGACGCTGCTGTGCATTCTGGTGGTCAACTTCGTCATCG
TGCAGGCCGCGCCCGGCGGC

Product: extracellular solute-binding protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 623; Mature: 622

Protein sequence:

>623_residues
MTFMRNMAGLLLGSALLCNAAAALAGGSYAMTVYGEAPKYPAGFQHFDFVNPDAPKGGSLSRASMEIGQYNYITPYADQG
ISVVQVNDWVYSPLAFRSLDEPYTVYGLVAQTMERDPDGLWVRFNLNPEARFADGTPITAEDVRYTFELLMTKGSLSYRQ
QYADVQDVLIEGPRQIRFTFKNNLNRTLALDLASLRPVPEHWWKTRDFANGGGFEPPLGSGPYRVSKVDAGRSISFQRDP
HWWGKDLPVSRGMYNFDSLTVNFYGDTDVARQLLQAGAFDYNREFSSSGYVVGYDSPALRDGRLQQAILAPDKPTCAQGF
VFNLQNPLFKDRRVRQALSLLWDFEWTNKQMMRGFYVRQNSYWPKSEMAATALPDAGELAILEPLRGQIPDEVFSRVYQA
PKTDGSGYIRDKQLQALKLLAEAGWTPKNNRLVNAAGEPFEFTFLDGQGGFDRMLLPYKRTLAQIGITLNLRRIDSAQYI
NRLNARDYDMIVTSFPRSGDPIVSPGRELYSLYASQSATQVGSSNSMVLADPAVDRLIDGLVQANTRDAMVRYARALDRV
LQWGDYMIPNYYSKGTPTVFQNRFGRPPVQPIYSEGLDTWWEVSAKPLTNQQMSALRQLAGGQ

Sequences:

>Translated_623_residues
MTFMRNMAGLLLGSALLCNAAAALAGGSYAMTVYGEAPKYPAGFQHFDFVNPDAPKGGSLSRASMEIGQYNYITPYADQG
ISVVQVNDWVYSPLAFRSLDEPYTVYGLVAQTMERDPDGLWVRFNLNPEARFADGTPITAEDVRYTFELLMTKGSLSYRQ
QYADVQDVLIEGPRQIRFTFKNNLNRTLALDLASLRPVPEHWWKTRDFANGGGFEPPLGSGPYRVSKVDAGRSISFQRDP
HWWGKDLPVSRGMYNFDSLTVNFYGDTDVARQLLQAGAFDYNREFSSSGYVVGYDSPALRDGRLQQAILAPDKPTCAQGF
VFNLQNPLFKDRRVRQALSLLWDFEWTNKQMMRGFYVRQNSYWPKSEMAATALPDAGELAILEPLRGQIPDEVFSRVYQA
PKTDGSGYIRDKQLQALKLLAEAGWTPKNNRLVNAAGEPFEFTFLDGQGGFDRMLLPYKRTLAQIGITLNLRRIDSAQYI
NRLNARDYDMIVTSFPRSGDPIVSPGRELYSLYASQSATQVGSSNSMVLADPAVDRLIDGLVQANTRDAMVRYARALDRV
LQWGDYMIPNYYSKGTPTVFQNRFGRPPVQPIYSEGLDTWWEVSAKPLTNQQMSALRQLAGGQ
>Mature_622_residues
TFMRNMAGLLLGSALLCNAAAALAGGSYAMTVYGEAPKYPAGFQHFDFVNPDAPKGGSLSRASMEIGQYNYITPYADQGI
SVVQVNDWVYSPLAFRSLDEPYTVYGLVAQTMERDPDGLWVRFNLNPEARFADGTPITAEDVRYTFELLMTKGSLSYRQQ
YADVQDVLIEGPRQIRFTFKNNLNRTLALDLASLRPVPEHWWKTRDFANGGGFEPPLGSGPYRVSKVDAGRSISFQRDPH
WWGKDLPVSRGMYNFDSLTVNFYGDTDVARQLLQAGAFDYNREFSSSGYVVGYDSPALRDGRLQQAILAPDKPTCAQGFV
FNLQNPLFKDRRVRQALSLLWDFEWTNKQMMRGFYVRQNSYWPKSEMAATALPDAGELAILEPLRGQIPDEVFSRVYQAP
KTDGSGYIRDKQLQALKLLAEAGWTPKNNRLVNAAGEPFEFTFLDGQGGFDRMLLPYKRTLAQIGITLNLRRIDSAQYIN
RLNARDYDMIVTSFPRSGDPIVSPGRELYSLYASQSATQVGSSNSMVLADPAVDRLIDGLVQANTRDAMVRYARALDRVL
QWGDYMIPNYYSKGTPTVFQNRFGRPPVQPIYSEGLDTWWEVSAKPLTNQQMSALRQLAGGQ

Specific function: Unknown

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI87082063, Length=595, Percent_Identity=36.4705882352941, Blast_Score=372, Evalue=1e-104,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 69979; Mature: 69848

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFMRNMAGLLLGSALLCNAAAALAGGSYAMTVYGEAPKYPAGFQHFDFVNPDAPKGGSL
CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
SRASMEIGQYNYITPYADQGISVVQVNDWVYSPLAFRSLDEPYTVYGLVAQTMERDPDGL
CHHHHHHCCCCCCCCCCCCCEEEEEECCCEECCHHHHCCCCCHHHHHHHHHHHHCCCCCE
WVRFNLNPEARFADGTPITAEDVRYTFELLMTKGSLSYRQQYADVQDVLIEGPRQIRFTF
EEEEECCCCCEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEE
KNNLNRTLALDLASLRPVPEHWWKTRDFANGGGFEPPLGSGPYRVSKVDAGRSISFQRDP
CCCCCCEEEEEHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC
HWWGKDLPVSRGMYNFDSLTVNFYGDTDVARQLLQAGAFDYNREFSSSGYVVGYDSPALR
CCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCC
DGRLQQAILAPDKPTCAQGFVFNLQNPLFKDRRVRQALSLLWDFEWTNKQMMRGFYVRQN
CCCHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHEEEEECC
SYWPKSEMAATALPDAGELAILEPLRGQIPDEVFSRVYQAPKTDGSGYIRDKQLQALKLL
CCCCHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCCEEHHHHHHHHHH
AEAGWTPKNNRLVNAAGEPFEFTFLDGQGGFDRMLLPYKRTLAQIGITLNLRRIDSAQYI
HHCCCCCCCCEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCEEEEEECCHHHHH
NRLNARDYDMIVTSFPRSGDPIVSPGRELYSLYASQSATQVGSSNSMVLADPAVDRLIDG
HHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHH
LVQANTRDAMVRYARALDRVLQWGDYMIPNYYSKGTPTVFQNRFGRPPVQPIYSEGLDTW
HHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHCCCCCC
WEVSAKPLTNQQMSALRQLAGGQ
CCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
TFMRNMAGLLLGSALLCNAAAALAGGSYAMTVYGEAPKYPAGFQHFDFVNPDAPKGGSL
CHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
SRASMEIGQYNYITPYADQGISVVQVNDWVYSPLAFRSLDEPYTVYGLVAQTMERDPDGL
CHHHHHHCCCCCCCCCCCCCEEEEEECCCEECCHHHHCCCCCHHHHHHHHHHHHCCCCCE
WVRFNLNPEARFADGTPITAEDVRYTFELLMTKGSLSYRQQYADVQDVLIEGPRQIRFTF
EEEEECCCCCEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEE
KNNLNRTLALDLASLRPVPEHWWKTRDFANGGGFEPPLGSGPYRVSKVDAGRSISFQRDP
CCCCCCEEEEEHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC
HWWGKDLPVSRGMYNFDSLTVNFYGDTDVARQLLQAGAFDYNREFSSSGYVVGYDSPALR
CCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCC
DGRLQQAILAPDKPTCAQGFVFNLQNPLFKDRRVRQALSLLWDFEWTNKQMMRGFYVRQN
CCCHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHEEEEECC
SYWPKSEMAATALPDAGELAILEPLRGQIPDEVFSRVYQAPKTDGSGYIRDKQLQALKLL
CCCCHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCCEEHHHHHHHHHH
AEAGWTPKNNRLVNAAGEPFEFTFLDGQGGFDRMLLPYKRTLAQIGITLNLRRIDSAQYI
HHCCCCCCCCEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCEEEEEECCHHHHH
NRLNARDYDMIVTSFPRSGDPIVSPGRELYSLYASQSATQVGSSNSMVLADPAVDRLIDG
HHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHH
LVQANTRDAMVRYARALDRVLQWGDYMIPNYYSKGTPTVFQNRFGRPPVQPIYSEGLDTW
HHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHCCCCCC
WEVSAKPLTNQQMSALRQLAGGQ
CCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA