| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yeaE [H]
Identifier: 77459954
GI number: 77459954
Start: 4217486
End: 4218307
Strand: Direct
Name: yeaE [H]
Synonym: Pfl01_3732
Alternate gene names: 77459954
Gene position: 4217486-4218307 (Clockwise)
Preceding gene: 77459953
Following gene: 77459955
Centisome position: 65.51
GC content: 63.75
Gene sequence:
>822_bases ATGCGTACCCTCGAATTGGCTGGCGTGCAGGTGCCGGTGATTGGCCAGGGCACCTGGCGCATGGGCGAAGACCGTTCGGC GCACAAGCGTGAAGTGGCGGCCCTGCGCAGTGGCATCGAACTGGGGATGACCTTGATCGACACTGCGGAAATGTACGGTG AAGGCGGTGCCGAAACCGTCGTCGGCGAAGCCATTGCCGGCCTGCGCGATCAAGTGTTTCTGGTGAGCAAGGTCTACCCG CACAACGCCAGCCGCCAAGGCATTCCCCAGGCCTGCGAGCGTAGCCTGCGCCGGCTCGACACCGATTACATCGACCTCTA TCTGCTGCATTGGCGCGGCCAGTATCCGCTGGAAGAAACCGTCGAGGCGTTCGAACGTCTGCGCGAGGACGGCAAGATCG GTCGCTGGGGCGTCTCGAACTTCGACGTCGACGATCTCGAAGAACTGTCGCATTCGGCCTGCGCCACCAATCAGGTGCTG TACAACCTGGAAGAGCGCGGTATCGAATTCGACCTGCTGCCGTGGTGCCAACAGCAGCGCATGCCGTTGATGGCGTACTG CCCGATCGGCCAGGGCGGCGCGATGCTGGCCGAGCCGGTGCTGAAACAGATTGCCGCTCGTCACGGCGTGACCCCGGCGC AGGTTTCGCTGGCGTGGATTCTGCGTCAGGATGGGCTGATTGCGATTCCCAAGGCCGTGCGCCCGGAACACGTGCAGCTC AATGCACAAGCGGCGCAGCTGCCACTCGATGGCGGGGATCTGGCGGCGCTGGACCAGGTGTTTCATGCGCCACAACGCAA GCAGCGGCTGGCCATGGTCTGA
Upstream 100 bases:
>100_bases CGCCAAGTAAGCACCTGACCTCCTTTCTGGAACCGGACGGAACCCGTGGGCTATTCTGCTGCCCACCCAAGGTATCGACC CTTTCAGAAAGGAGGTTTGA
Downstream 100 bases:
>100_bases GCCACCGCCGACTGACAGAGGGCTTCGCCATGAGAAGCACTGATCAGGACGATCCATTCAACCTGCAACGCTTCGTGCTC GCCCAGGACCCGGTGTTCGA
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MRTLELAGVQVPVIGQGTWRMGEDRSAHKREVAALRSGIELGMTLIDTAEMYGEGGAETVVGEAIAGLRDQVFLVSKVYP HNASRQGIPQACERSLRRLDTDYIDLYLLHWRGQYPLEETVEAFERLREDGKIGRWGVSNFDVDDLEELSHSACATNQVL YNLEERGIEFDLLPWCQQQRMPLMAYCPIGQGGAMLAEPVLKQIAARHGVTPAQVSLAWILRQDGLIAIPKAVRPEHVQL NAQAAQLPLDGGDLAALDQVFHAPQRKQRLAMV
Sequences:
>Translated_273_residues MRTLELAGVQVPVIGQGTWRMGEDRSAHKREVAALRSGIELGMTLIDTAEMYGEGGAETVVGEAIAGLRDQVFLVSKVYP HNASRQGIPQACERSLRRLDTDYIDLYLLHWRGQYPLEETVEAFERLREDGKIGRWGVSNFDVDDLEELSHSACATNQVL YNLEERGIEFDLLPWCQQQRMPLMAYCPIGQGGAMLAEPVLKQIAARHGVTPAQVSLAWILRQDGLIAIPKAVRPEHVQL NAQAAQLPLDGGDLAALDQVFHAPQRKQRLAMV >Mature_273_residues MRTLELAGVQVPVIGQGTWRMGEDRSAHKREVAALRSGIELGMTLIDTAEMYGEGGAETVVGEAIAGLRDQVFLVSKVYP HNASRQGIPQACERSLRRLDTDYIDLYLLHWRGQYPLEETVEAFERLREDGKIGRWGVSNFDVDDLEELSHSACATNQVL YNLEERGIEFDLLPWCQQQRMPLMAYCPIGQGGAMLAEPVLKQIAARHGVTPAQVSLAWILRQDGLIAIPKAVRPEHVQL NAQAAQLPLDGGDLAALDQVFHAPQRKQRLAMV
Specific function: Unknown
COG id: COG0656
COG function: function code R; Aldo/keto reductases, related to diketogulonate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI223468663, Length=292, Percent_Identity=28.7671232876712, Blast_Score=104, Evalue=1e-22, Organism=Homo sapiens, GI310109922, Length=271, Percent_Identity=28.7822878228782, Blast_Score=99, Evalue=4e-21, Organism=Homo sapiens, GI24497577, Length=292, Percent_Identity=27.0547945205479, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI5174391, Length=292, Percent_Identity=27.0547945205479, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI93277124, Length=312, Percent_Identity=25.9615384615385, Blast_Score=96, Evalue=2e-20, Organism=Homo sapiens, GI291291012, Length=268, Percent_Identity=29.1044776119403, Blast_Score=95, Evalue=6e-20, Organism=Homo sapiens, GI5453543, Length=291, Percent_Identity=27.4914089347079, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI45446745, Length=291, Percent_Identity=27.4914089347079, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI4503285, Length=291, Percent_Identity=27.4914089347079, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI310109920, Length=291, Percent_Identity=27.4914089347079, Blast_Score=92, Evalue=4e-19, Organism=Homo sapiens, GI24497585, Length=291, Percent_Identity=27.8350515463918, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI24497583, Length=291, Percent_Identity=28.1786941580756, Blast_Score=88, Evalue=8e-18, Organism=Homo sapiens, GI4502049, Length=300, Percent_Identity=29.6666666666667, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI300116273, Length=280, Percent_Identity=28.2142857142857, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI5174695, Length=296, Percent_Identity=27.7027027027027, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI223718702, Length=198, Percent_Identity=29.2929292929293, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI41327764, Length=169, Percent_Identity=30.7692307692308, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1788081, Length=281, Percent_Identity=56.9395017793594, Blast_Score=322, Evalue=2e-89, Organism=Escherichia coli, GI1786400, Length=263, Percent_Identity=31.5589353612167, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI1788070, Length=326, Percent_Identity=27.9141104294479, Blast_Score=105, Evalue=2e-24, Organism=Escherichia coli, GI87082198, Length=267, Percent_Identity=30.7116104868914, Blast_Score=104, Evalue=6e-24, Organism=Escherichia coli, GI87081735, Length=295, Percent_Identity=27.1186440677966, Blast_Score=87, Evalue=9e-19, Organism=Escherichia coli, GI1789199, Length=341, Percent_Identity=29.6187683284457, Blast_Score=81, Evalue=8e-17, Organism=Escherichia coli, GI1789375, Length=310, Percent_Identity=24.8387096774194, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1787674, Length=289, Percent_Identity=25.2595155709343, Blast_Score=74, Evalue=7e-15, Organism=Escherichia coli, GI48994888, Length=236, Percent_Identity=28.8135593220339, Blast_Score=72, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17564128, Length=295, Percent_Identity=29.4915254237288, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17552492, Length=280, Percent_Identity=28.2142857142857, Blast_Score=104, Evalue=6e-23, Organism=Caenorhabditis elegans, GI71998625, Length=274, Percent_Identity=29.9270072992701, Blast_Score=103, Evalue=9e-23, Organism=Caenorhabditis elegans, GI17561298, Length=282, Percent_Identity=30.8510638297872, Blast_Score=101, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17566692, Length=307, Percent_Identity=25.4071661237785, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17538386, Length=277, Percent_Identity=27.0758122743682, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17537075, Length=299, Percent_Identity=27.0903010033445, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17550248, Length=303, Percent_Identity=24.4224422442244, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17537077, Length=299, Percent_Identity=26.4214046822742, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17561300, Length=265, Percent_Identity=25.6603773584906, Blast_Score=85, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6320576, Length=287, Percent_Identity=30.6620209059233, Blast_Score=114, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6324694, Length=292, Percent_Identity=29.4520547945205, Blast_Score=110, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6320079, Length=263, Percent_Identity=26.615969581749, Blast_Score=77, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6322556, Length=277, Percent_Identity=23.4657039711191, Blast_Score=64, Evalue=3e-11, Organism=Drosophila melanogaster, GI24644950, Length=319, Percent_Identity=29.7805642633229, Blast_Score=108, Evalue=3e-24, Organism=Drosophila melanogaster, GI221378297, Length=339, Percent_Identity=28.3185840707965, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI45553081, Length=270, Percent_Identity=27.7777777777778, Blast_Score=95, Evalue=6e-20, Organism=Drosophila melanogaster, GI24657054, Length=296, Percent_Identity=26.3513513513513, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI24663317, Length=310, Percent_Identity=27.741935483871, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI21356425, Length=287, Percent_Identity=26.8292682926829, Blast_Score=84, Evalue=8e-17, Organism=Drosophila melanogaster, GI24662789, Length=274, Percent_Identity=27.3722627737226, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI20129731, Length=300, Percent_Identity=26, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI281366140, Length=237, Percent_Identity=27.8481012658228, Blast_Score=78, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 30331; Mature: 30331
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTLELAGVQVPVIGQGTWRMGEDRSAHKREVAALRSGIELGMTLIDTAEMYGEGGAETV CCCEEECCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH VGEAIAGLRDQVFLVSKVYPHNASRQGIPQACERSLRRLDTDYIDLYLLHWRGQYPLEET HHHHHHHHHHHEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHH VEAFERLREDGKIGRWGVSNFDVDDLEELSHSACATNQVLYNLEERGIEFDLLPWCQQQR HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHCC MPLMAYCPIGQGGAMLAEPVLKQIAARHGVTPAQVSLAWILRQDGLIAIPKAVRPEHVQL CCEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHEECCCCEEECCCCCCCCEEEE NAQAAQLPLDGGDLAALDQVFHAPQRKQRLAMV CCHHHCCCCCCCCHHHHHHHHHCCHHHHHCCCC >Mature Secondary Structure MRTLELAGVQVPVIGQGTWRMGEDRSAHKREVAALRSGIELGMTLIDTAEMYGEGGAETV CCCEEECCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH VGEAIAGLRDQVFLVSKVYPHNASRQGIPQACERSLRRLDTDYIDLYLLHWRGQYPLEET HHHHHHHHHHHEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHH VEAFERLREDGKIGRWGVSNFDVDDLEELSHSACATNQVLYNLEERGIEFDLLPWCQQQR HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHCC MPLMAYCPIGQGGAMLAEPVLKQIAARHGVTPAQVSLAWILRQDGLIAIPKAVRPEHVQL CCEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHEECCCCEEECCCCCCCCEEEE NAQAAQLPLDGGDLAALDQVFHAPQRKQRLAMV CCHHHCCCCCCCCHHHHHHHHHCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]