Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is 77459932
Identifier: 77459932
GI number: 77459932
Start: 4197559
End: 4198068
Strand: Reverse
Name: 77459932
Synonym: Pfl01_3710
Alternate gene names: NA
Gene position: 4198068-4197559 (Counterclockwise)
Preceding gene: 77459934
Following gene: 77459930
Centisome position: 65.2
GC content: 58.63
Gene sequence:
>510_bases ATGACCATTTCCCTGTACGCCGCATCCGTCCCGGTTTTCCAACAAATGCTCAACGCCCTGAGCGATGTGCTGAAAAAGGC TGAAGCCCACGCCACTGAGAAAAACATCGACCCGAACGCCTTCCTGCAAGCGCGTCTGTACCCGGACATGTTCCCGCTGG TGCGTCAGGTGCAGATCGCCGTGGACTTCGCCAAGGGCGTGTCCTCGCGTCTGGCCGAAATCGAAATCCCGAAATATGAC GACACCGAAACCACCTTCGCCGAGCTGCAAGCGCTGATCGCCAAGGTTCTGGCCTTCATCGGCGAGATCAAGCCAGAGCA GATCAATGGCAAGGAAGGCATCGAGATCGTGACTCGCCCGGGCACCCCGAAAGAGAAGCGCTTCAGCGGCCAGGCTTATC TGCTGAGTTACGGCCTGCCGCAGTTCTTCTTCCACGTCACCACCACCTACGCCCTGCTGCGTCACAACGGTGTGGAAGTG GGCAAGCGCGATTACATGGGCGCGTTCTAA
Upstream 100 bases:
>100_bases GCCTAGCCTAATCCTTGCTGGATAAAAGACAAGCCGCGCCGCCATGCGAGCATGGCTATAATCGCCCCCACGATTCAACC AGCCACCACGTGAGACTGCC
Downstream 100 bases:
>100_bases AACGTTCTGCAACAAAAAGCCCGCCAAGGTTTGCGCCTTGGCGGGCTTTTTGTTGCGCCGGGCTTTTACGCCGGACGCTG GGCTTTCTGCTCTTCGCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MTISLYAASVPVFQQMLNALSDVLKKAEAHATEKNIDPNAFLQARLYPDMFPLVRQVQIAVDFAKGVSSRLAEIEIPKYD DTETTFAELQALIAKVLAFIGEIKPEQINGKEGIEIVTRPGTPKEKRFSGQAYLLSYGLPQFFFHVTTTYALLRHNGVEV GKRDYMGAF
Sequences:
>Translated_169_residues MTISLYAASVPVFQQMLNALSDVLKKAEAHATEKNIDPNAFLQARLYPDMFPLVRQVQIAVDFAKGVSSRLAEIEIPKYD DTETTFAELQALIAKVLAFIGEIKPEQINGKEGIEIVTRPGTPKEKRFSGQAYLLSYGLPQFFFHVTTTYALLRHNGVEV GKRDYMGAF >Mature_168_residues TISLYAASVPVFQQMLNALSDVLKKAEAHATEKNIDPNAFLQARLYPDMFPLVRQVQIAVDFAKGVSSRLAEIEIPKYDD TETTFAELQALIAKVLAFIGEIKPEQINGKEGIEIVTRPGTPKEKRFSGQAYLLSYGLPQFFFHVTTTYALLRHNGVEVG KRDYMGAF
Specific function: Unknown
COG id: COG3812
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18887; Mature: 18756
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTISLYAASVPVFQQMLNALSDVLKKAEAHATEKNIDPNAFLQARLYPDMFPLVRQVQIA CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHCCCHHHHHHHHHHHH VDFAKGVSSRLAEIEIPKYDDTETTFAELQALIAKVLAFIGEIKPEQINGKEGIEIVTRP HHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECC GTPKEKRFSGQAYLLSYGLPQFFFHVTTTYALLRHNGVEVGKRDYMGAF CCCHHHHCCCCEEEEHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TISLYAASVPVFQQMLNALSDVLKKAEAHATEKNIDPNAFLQARLYPDMFPLVRQVQIA EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHCCCHHHHHHHHHHHH VDFAKGVSSRLAEIEIPKYDDTETTFAELQALIAKVLAFIGEIKPEQINGKEGIEIVTRP HHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECC GTPKEKRFSGQAYLLSYGLPQFFFHVTTTYALLRHNGVEVGKRDYMGAF CCCHHHHCCCCEEEEHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA