Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is yoaE [H]
Identifier: 77459927
GI number: 77459927
Start: 4192701
End: 4193450
Strand: Reverse
Name: yoaE [H]
Synonym: Pfl01_3705
Alternate gene names: 77459927
Gene position: 4193450-4192701 (Counterclockwise)
Preceding gene: 77459928
Following gene: 77459925
Centisome position: 65.13
GC content: 57.07
Gene sequence:
>750_bases ATGGAATATCTGTTAGAACTCGCTTCCAGCCCGACCGCCTGGATTGCCTTGGCCACATTGGTGGTGATGGAGATCGTACT CGGCATCGATAACCTGATCTTCATCTCGATCCTGACCAACAAGCTGCCCGAGCAATATCGGCAGAAAGCCCGTCGTCTGG GGATCGGCATGGCGCTGATCATGCGTCTGGCCTTGTTGAGCACCATCGCGTTCATCGTTCAGTTGACCGCGCCGGTCATC GAAATCCTCGGCCAGGCGTTCTCCTGGAAGGACATGATCCTGATTGCCGGTGGCCTGTTCCTGGTGTGGAAGGCGACGAC CGAAATCCATCACAGCATGGACCCGGCGCCGGAAGATCCGAAGACCGCGACGTCGACGGTGACCCTGGGTTTTGCAGCCG CCATTGGGCAGATCCTGATGCTGGACATGGTGTTCTCGATCGACAGCATCATTACCGCGGTCGGCATGACCGAACACTTG CCGATCATGGTGATTGCAGTGGTTGTCTCGGTGCTGGTGATGTTGTTTGCAGCTGATCCGCTGGCCAAGTTCATCAATGA CAACCCGACGGTGGTGATGCTGGCGCTGGGCTTCCTGATCATGATCGGCATGACGCTGATTGCAGAGGGCTTCGGCGCCC ACGTACCGAAAGGTTATGTGTATGCCGCCATGGCATTCTCGGCTGCGATTGAAGTGCTGAACATGATGTCGCGCCGCGCC AAGCAGAAGAAACTGACTGCCGAAGCGTAA
Upstream 100 bases:
>100_bases GCAATCTGATCAGCAAGAAAGAACCGAAAGACGACGAAGAAAAATCCGAATCGTCCTCCCAGGAAATCTAAACCGTCTTA CACAGAGTCAGGACTGACCC
Downstream 100 bases:
>100_bases TCGCTGGAAAACCAAAGGCCGCCTGAACTCGCGAGAGTCCAGGCGGCCTTTTTGTTTTTGTTGGTTGCAGAACGTCAGTG CGCGGTGGCGTGGCGGGCGT
Product: integral membrane protein TerC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MEYLLELASSPTAWIALATLVVMEIVLGIDNLIFISILTNKLPEQYRQKARRLGIGMALIMRLALLSTIAFIVQLTAPVI EILGQAFSWKDMILIAGGLFLVWKATTEIHHSMDPAPEDPKTATSTVTLGFAAAIGQILMLDMVFSIDSIITAVGMTEHL PIMVIAVVVSVLVMLFAADPLAKFINDNPTVVMLALGFLIMIGMTLIAEGFGAHVPKGYVYAAMAFSAAIEVLNMMSRRA KQKKLTAEA
Sequences:
>Translated_249_residues MEYLLELASSPTAWIALATLVVMEIVLGIDNLIFISILTNKLPEQYRQKARRLGIGMALIMRLALLSTIAFIVQLTAPVI EILGQAFSWKDMILIAGGLFLVWKATTEIHHSMDPAPEDPKTATSTVTLGFAAAIGQILMLDMVFSIDSIITAVGMTEHL PIMVIAVVVSVLVMLFAADPLAKFINDNPTVVMLALGFLIMIGMTLIAEGFGAHVPKGYVYAAMAFSAAIEVLNMMSRRA KQKKLTAEA >Mature_249_residues MEYLLELASSPTAWIALATLVVMEIVLGIDNLIFISILTNKLPEQYRQKARRLGIGMALIMRLALLSTIAFIVQLTAPVI EILGQAFSWKDMILIAGGLFLVWKATTEIHHSMDPAPEDPKTATSTVTLGFAAAIGQILMLDMVFSIDSIITAVGMTEHL PIMVIAVVVSVLVMLFAADPLAKFINDNPTVVMLALGFLIMIGMTLIAEGFGAHVPKGYVYAAMAFSAAIEVLNMMSRRA KQKKLTAEA
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Escherichia coli, GI1788119, Length=239, Percent_Identity=51.8828451882845, Blast_Score=251, Evalue=2e-68, Organism=Escherichia coli, GI1789197, Length=237, Percent_Identity=52.3206751054852, Blast_Score=226, Evalue=1e-60, Organism=Escherichia coli, GI87082033, Length=243, Percent_Identity=45.2674897119342, Blast_Score=207, Evalue=5e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016169 - InterPro: IPR000644 - InterPro: IPR005496 - InterPro: IPR005170 [H]
Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 26964; Mature: 26964
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.8 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.8 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYLLELASSPTAWIALATLVVMEIVLGIDNLIFISILTNKLPEQYRQKARRLGIGMALI CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH MRLALLSTIAFIVQLTAPVIEILGQAFSWKDMILIAGGLFLVWKATTEIHHSMDPAPEDP HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCC KTATSTVTLGFAAAIGQILMLDMVFSIDSIITAVGMTEHLPIMVIAVVVSVLVMLFAADP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCH LAKFINDNPTVVMLALGFLIMIGMTLIAEGFGAHVPKGYVYAAMAFSAAIEVLNMMSRRA HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH KQKKLTAEA HHHHHCCCC >Mature Secondary Structure MEYLLELASSPTAWIALATLVVMEIVLGIDNLIFISILTNKLPEQYRQKARRLGIGMALI CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH MRLALLSTIAFIVQLTAPVIEILGQAFSWKDMILIAGGLFLVWKATTEIHHSMDPAPEDP HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCC KTATSTVTLGFAAAIGQILMLDMVFSIDSIITAVGMTEHLPIMVIAVVVSVLVMLFAADP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCH LAKFINDNPTVVMLALGFLIMIGMTLIAEGFGAHVPKGYVYAAMAFSAAIEVLNMMSRRA HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH KQKKLTAEA HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]