Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is 77459925
Identifier: 77459925
GI number: 77459925
Start: 4191556
End: 4192230
Strand: Reverse
Name: 77459925
Synonym: Pfl01_3703
Alternate gene names: NA
Gene position: 4192230-4191556 (Counterclockwise)
Preceding gene: 77459927
Following gene: 77459924
Centisome position: 65.11
GC content: 64.0
Gene sequence:
>675_bases ATGATGGTGCAGCTATTTTCCCGGATTCGCGCAGCGCTGCTGGTGGCCGGTTGCGTGACAGCATTGGTGGGGTGTGCGGG CAGTGTGGCGCCGGAGGTCAAGCGCCTGCCGGAACGGGTCGAGCTCAGCGGCACCTTCTACCGCGGTGAGGCCTATCAAA GCGGGCCACAGGTGCTGGCCAGTCTGCTGTCGCAGCAGGGCATCGTGATCACGCCGGGGCTGTTGGAAAAACCGCTGCAC TTGCCGGGCGCCGAGGACAAGTTGCAACAGAATCTGCAGAGCCTGGCGCGTGAATACGGCATGGTCGTGTATCCGCTGGA CAGCAATCTGCCGGCGCTGCTGACTCAGGTGGCGGCCGGGTATCCGGTGATGGTGCGTTTCAGTGAGGGCTCGGCGTTTT GGGCGGAGCCGCGTTACGCGATCCTGTCCGGCTACGATCGCTTGAAGCAGAAGGTGCTGCTGCGCGCCGGGATGAATCGC CGTGAATTGATGAGCTTCAGCTCGTTTGAGTCGGCCCTCGAAAAATCCGGCGGCTGGGCGGTGTTGATCCAGAAACCGAC GCAGATTCCAGCGGCGGTCGATCAACAGCGCTGGCTGAAAGCTGCCGATGCACTGGCCCAGGCCGGGCAGGAGCGGGAAG CGGCGCAGGCGAGAAAGGCGCTGGCGGCGCATTGA
Upstream 100 bases:
>100_bases GCTCTGGCATCTGCCGCTTTGGGCTATACCGCAACGTTGCGCCGTCCTATGATCCTCGACCAAGCCGGAACACGATGACC GGTAACTGATCAAGAGAGTG
Downstream 100 bases:
>100_bases GGTTCCGTTCGTCGCCTGTCGGGCACCCTGATGGAGGATGCGCTTCTGAACTGTAGCGTCCCGTGTTTTACGGGCCAGTA TCAGGAGGCGAACATGGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: Peptidase; Lipoprotein; Tetratricopeptide TPR_2 Repeat Protein
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MMVQLFSRIRAALLVAGCVTALVGCAGSVAPEVKRLPERVELSGTFYRGEAYQSGPQVLASLLSQQGIVITPGLLEKPLH LPGAEDKLQQNLQSLAREYGMVVYPLDSNLPALLTQVAAGYPVMVRFSEGSAFWAEPRYAILSGYDRLKQKVLLRAGMNR RELMSFSSFESALEKSGGWAVLIQKPTQIPAAVDQQRWLKAADALAQAGQEREAAQARKALAAH
Sequences:
>Translated_224_residues MMVQLFSRIRAALLVAGCVTALVGCAGSVAPEVKRLPERVELSGTFYRGEAYQSGPQVLASLLSQQGIVITPGLLEKPLH LPGAEDKLQQNLQSLAREYGMVVYPLDSNLPALLTQVAAGYPVMVRFSEGSAFWAEPRYAILSGYDRLKQKVLLRAGMNR RELMSFSSFESALEKSGGWAVLIQKPTQIPAAVDQQRWLKAADALAQAGQEREAAQARKALAAH >Mature_224_residues MMVQLFSRIRAALLVAGCVTALVGCAGSVAPEVKRLPERVELSGTFYRGEAYQSGPQVLASLLSQQGIVITPGLLEKPLH LPGAEDKLQQNLQSLAREYGMVVYPLDSNLPALLTQVAAGYPVMVRFSEGSAFWAEPRYAILSGYDRLKQKVLLRAGMNR RELMSFSSFESALEKSGGWAVLIQKPTQIPAAVDQQRWLKAADALAQAGQEREAAQARKALAAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24338; Mature: 24338
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMVQLFSRIRAALLVAGCVTALVGCAGSVAPEVKRLPERVELSGTFYRGEAYQSGPQVLA CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCHHHHHHCCEEEECCHHCCCHHHHH SLLSQQGIVITPGLLEKPLHLPGAEDKLQQNLQSLAREYGMVVYPLDSNLPALLTQVAAG HHHHCCCEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHCC YPVMVRFSEGSAFWAEPRYAILSGYDRLKQKVLLRAGMNRRELMSFSSFESALEKSGGWA CCEEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEE VLIQKPTQIPAAVDQQRWLKAADALAQAGQEREAAQARKALAAH EEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure MMVQLFSRIRAALLVAGCVTALVGCAGSVAPEVKRLPERVELSGTFYRGEAYQSGPQVLA CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCHHHHHHCCEEEECCHHCCCHHHHH SLLSQQGIVITPGLLEKPLHLPGAEDKLQQNLQSLAREYGMVVYPLDSNLPALLTQVAAG HHHHCCCEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHCC YPVMVRFSEGSAFWAEPRYAILSGYDRLKQKVLLRAGMNRRELMSFSSFESALEKSGGWA CCEEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEE VLIQKPTQIPAAVDQQRWLKAADALAQAGQEREAAQARKALAAH EEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA