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The map label for this gene is oruR [H]

Identifier: 77459911

GI number: 77459911

Start: 4174703

End: 4175728

Strand: Direct

Name: oruR [H]

Synonym: Pfl01_3689

Alternate gene names: 77459911

Gene position: 4174703-4175728 (Clockwise)

Preceding gene: 77459910

Following gene: 77459914

Centisome position: 64.84

GC content: 63.06

Gene sequence:

>1026_bases
ATGCGTCTCGGGGATCTGTCGGTGGGCTTTGTTCACAGCCTGGCCGATGCCGTACGCAGCCATGACGTCGATCCGCTGCC
ATTGCTCGAACAGTACGGCCTGGATGCCGCACGGCTGGCCGAAGCCGGGGCGCGTCTGTCGATCCCGCGCTACATGCGCC
TGGGGCATGGCGCGATCCAGCTGACCGGCGATCCGGCATTGGGTTTGCGCATGGGCGGACTCAGCCGATTGAGTCAGGCC
GGGCTGGCCGGTGTGACCGCCGCGCAGGCCCCGACCGTGCGCGAAGCCGCTCGCTGCCTGACTCGTTTCGAACCGTTGTA
CGGTTCCAACTATCGCGGCCAGTCGAGTTTCCACGAAGACGCCAGCGGTGCGTGGCTGCGCTTCTATTCGATCAGCCCGT
ACAACGCTTACAACCGGTTTGTGGTGGATTCGATCATTGCCGGGTGGCTGCATCAGTTGTCCAGCGTCAGCCCCGAACCC
TTGCGCGCCGAGCGGATCGAGATCGAGTTCGACAACCCGGATTATCGCGACGCTTATGCGGTGCTTGGCGAATGCCCGAT
CCAGTTCGGCGCCGAACACAATCAACTGCGCCTGAGCCTCACCAGCCTGGGCCAACGCAATCCGGAGCATTGCCCCAGCA
CCTGGAAACATTTGCTCGGTCTGTGTGAACGGGAACTCGAGCAATTGACCCGCACCCGCAGCCTGCGCGAACGCATCACG
CAATTGCTCGGGCCGTTGCTCAATGGTGGCCGGGAACCCGACCTGGAAGAAGTGGCGGCACGCCTGAAGCTGCCGACCTG
GACGTTACGGCGCAAACTGGCCGAGGAAGGCACGCAGTTTCGCGCGATCCTCAATGACACCCGCCGTGATCTGGCAATGA
CCTACATCCGCGACACCGAACTGGCATTCGGTGAAATTGCCTACCTGCTGGGCTTTGCCTCGGCAGAAGCTTTCCAGCGC
GCATTCAAGCGCTGGAACGGCCAGACACCGGGCGAGTTTCGCCGCAGTCACCGCAAGACAGGCTGA

Upstream 100 bases:

>100_bases
GCAAAGCTTCCTCAGCAGCAACGGCCAGCAATTCGCCGACAGCGAAGCCCGTGGCGCGCGCCTGCTGAACCTCTGGTTGT
AACCCGTGAAGCCGCAGCCG

Downstream 100 bases:

>100_bases
CGCCTCACAGCTCGGTGGCGTCTTCCGCAGGCTCTGGTGAATCCAGCTCAAAGGCCTGGAATTCCAGCAGTTCTTCTTGA
TAGTCATCCATTGCGTAATC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MRLGDLSVGFVHSLADAVRSHDVDPLPLLEQYGLDAARLAEAGARLSIPRYMRLGHGAIQLTGDPALGLRMGGLSRLSQA
GLAGVTAAQAPTVREAARCLTRFEPLYGSNYRGQSSFHEDASGAWLRFYSISPYNAYNRFVVDSIIAGWLHQLSSVSPEP
LRAERIEIEFDNPDYRDAYAVLGECPIQFGAEHNQLRLSLTSLGQRNPEHCPSTWKHLLGLCERELEQLTRTRSLRERIT
QLLGPLLNGGREPDLEEVAARLKLPTWTLRRKLAEEGTQFRAILNDTRRDLAMTYIRDTELAFGEIAYLLGFASAEAFQR
AFKRWNGQTPGEFRRSHRKTG

Sequences:

>Translated_341_residues
MRLGDLSVGFVHSLADAVRSHDVDPLPLLEQYGLDAARLAEAGARLSIPRYMRLGHGAIQLTGDPALGLRMGGLSRLSQA
GLAGVTAAQAPTVREAARCLTRFEPLYGSNYRGQSSFHEDASGAWLRFYSISPYNAYNRFVVDSIIAGWLHQLSSVSPEP
LRAERIEIEFDNPDYRDAYAVLGECPIQFGAEHNQLRLSLTSLGQRNPEHCPSTWKHLLGLCERELEQLTRTRSLRERIT
QLLGPLLNGGREPDLEEVAARLKLPTWTLRRKLAEEGTQFRAILNDTRRDLAMTYIRDTELAFGEIAYLLGFASAEAFQR
AFKRWNGQTPGEFRRSHRKTG
>Mature_341_residues
MRLGDLSVGFVHSLADAVRSHDVDPLPLLEQYGLDAARLAEAGARLSIPRYMRLGHGAIQLTGDPALGLRMGGLSRLSQA
GLAGVTAAQAPTVREAARCLTRFEPLYGSNYRGQSSFHEDASGAWLRFYSISPYNAYNRFVVDSIIAGWLHQLSSVSPEP
LRAERIEIEFDNPDYRDAYAVLGECPIQFGAEHNQLRLSLTSLGQRNPEHCPSTWKHLLGLCERELEQLTRTRSLRERIT
QLLGPLLNGGREPDLEEVAARLKLPTWTLRRKLAEEGTQFRAILNDTRRDLAMTYIRDTELAFGEIAYLLGFASAEAFQR
AFKRWNGQTPGEFRRSHRKTG

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 38219; Mature: 38219

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLGDLSVGFVHSLADAVRSHDVDPLPLLEQYGLDAARLAEAGARLSIPRYMRLGHGAIQ
CCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHCCCCCCCHHHHHCCCCEEE
LTGDPALGLRMGGLSRLSQAGLAGVTAAQAPTVREAARCLTRFEPLYGSNYRGQSSFHED
EECCCCCHHHHCCHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHCHHCCCCCCCCCCCCCC
ASGAWLRFYSISPYNAYNRFVVDSIIAGWLHQLSSVSPEPLRAERIEIEFDNPDYRDAYA
CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHH
VLGECPIQFGAEHNQLRLSLTSLGQRNPEHCPSTWKHLLGLCERELEQLTRTRSLRERIT
HHHCCCHHCCCCCCCEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLLGPLLNGGREPDLEEVAARLKLPTWTLRRKLAEEGTQFRAILNDTRRDLAMTYIRDTE
HHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCH
LAFGEIAYLLGFASAEAFQRAFKRWNGQTPGEFRRSHRKTG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCC
>Mature Secondary Structure
MRLGDLSVGFVHSLADAVRSHDVDPLPLLEQYGLDAARLAEAGARLSIPRYMRLGHGAIQ
CCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHCCCCCCCHHHHHCCCCEEE
LTGDPALGLRMGGLSRLSQAGLAGVTAAQAPTVREAARCLTRFEPLYGSNYRGQSSFHED
EECCCCCHHHHCCHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHCHHCCCCCCCCCCCCCC
ASGAWLRFYSISPYNAYNRFVVDSIIAGWLHQLSSVSPEPLRAERIEIEFDNPDYRDAYA
CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHH
VLGECPIQFGAEHNQLRLSLTSLGQRNPEHCPSTWKHLLGLCERELEQLTRTRSLRERIT
HHHCCCHHCCCCCCCEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLLGPLLNGGREPDLEEVAARLKLPTWTLRRKLAEEGTQFRAILNDTRRDLAMTYIRDTE
HHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCH
LAFGEIAYLLGFASAEAFQRAFKRWNGQTPGEFRRSHRKTG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]