Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is 77459908
Identifier: 77459908
GI number: 77459908
Start: 4170359
End: 4171297
Strand: Reverse
Name: 77459908
Synonym: Pfl01_3686
Alternate gene names: NA
Gene position: 4171297-4170359 (Counterclockwise)
Preceding gene: 77459909
Following gene: 77459904
Centisome position: 64.79
GC content: 65.39
Gene sequence:
>939_bases ATGCCGGCTCTTTGCACAGAGCCGGCCTTCATGTTTCTGCCTCCCACCGACTGGCTACCTCAAGCCCCCCTCGAAGCGCT TCATCTGGACTGGCTCACCGCCGCCGGTATTGAAGTGGCGGCCCTGCGTCTGGACCGGATCGATCCGCTGATCAGCGGCA ACAAATGGTTCAAACTCGTCGAACATCTCAAAGCCGCCGACCGCGCGGGTGCCGAAGGCATCATCAGCCTCGGCGGCGCG CACTCCAATCATCTGCATGCACTGGCGGCTGCGGGCAAGCGCCTGGGATTCACGACGGTCGGGCTGTTGCGCGGGCATCC GCAGGACACGCCGACGGTCAGGGATCTGCAGGAGTTCGGCATGCAGCTGAACTGGCTCGGATACGGCGGTTATCGGGCGC GGCACGAGCCGGGATTCTGGCAGTCGTGGCTCGCGCAATATCCGACGCTGCATCCGGTGCCTGAAGGTGGCGGCGGATTG CCGGGCGCGCAGGGTTGCGCGGCGCTGAAGAATCAGGTCAGAGAACAACTCGGCAAACTTGGCTGGGACGACTACCACGG TTGGTGGCTGGCCTGCGGCACGGGCACCACGCTCGCGGGATTGGTGTTGGCCGAGACAGGACAACATGCGGTGTACGGCG CAATGGCCGTGCCCGACGATCACGGCGTCGCGGCCAATGTCGAGGCGCTTGTGGGCAAGGCTGGAGGCTACGAGCTGATC GACGCCAGCCGTGGCGGTTTCGCCAAGGTCGATCCGGCACTGCTTGAATTCATCGCGCACGCCGAACAGGCCGGCGGCAT TCCCCTCGAGCCGCTGTACACCGGCAAGGCCTTGCTGGCGCTCAAGCAACAGGTCGAGGCGGGCCGCTTTGCTCGGGGTT CACGCTTGATCTTCGTCCACACCGGCGGCTTGCAGGGGCGGCGCGGCTTTGACGGCTAA
Upstream 100 bases:
>100_bases TGCACCTGATCGGCGGCGCCGATGTGGCGGCCGAGCTGGATGCCAAACGTGCGATCAATCAGGGTTCGCGTCTGGCCGCC GAGCTCTGATCCACCCTAGA
Downstream 100 bases:
>100_bases CCCTGGCTGCGCTTGGGCATCATCCGCAGCAACGTGTTATCGCGCACCACGTAATGGTGATAGATCCCCGCCAGCGCATG CAGACCGATCAGCCAGTAGC
Product: 1-aminocyclopropane-1-carboxylate deaminase
Products: 2-oxobutanoate; NH3
Alternate protein names: D-Cysteine Desulfhydrase; ACC Deaminase/D-Cysteine Desulfhydrase Family Protein; Pyridoxal-5-Phosphate-Dependent Protein Beta Subunit; D-Cysteine Desulfhydrase PLP-Dependent; Pyridoxal-5-Phosphate-Dependent Beta Subunit; Deaminase; 1-Aminocyclopropane-1-Carboxylate Deaminase-Like Protein; D-Cysteine Desulfhydrase DcyD
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MPALCTEPAFMFLPPTDWLPQAPLEALHLDWLTAAGIEVAALRLDRIDPLISGNKWFKLVEHLKAADRAGAEGIISLGGA HSNHLHALAAAGKRLGFTTVGLLRGHPQDTPTVRDLQEFGMQLNWLGYGGYRARHEPGFWQSWLAQYPTLHPVPEGGGGL PGAQGCAALKNQVREQLGKLGWDDYHGWWLACGTGTTLAGLVLAETGQHAVYGAMAVPDDHGVAANVEALVGKAGGYELI DASRGGFAKVDPALLEFIAHAEQAGGIPLEPLYTGKALLALKQQVEAGRFARGSRLIFVHTGGLQGRRGFDG
Sequences:
>Translated_312_residues MPALCTEPAFMFLPPTDWLPQAPLEALHLDWLTAAGIEVAALRLDRIDPLISGNKWFKLVEHLKAADRAGAEGIISLGGA HSNHLHALAAAGKRLGFTTVGLLRGHPQDTPTVRDLQEFGMQLNWLGYGGYRARHEPGFWQSWLAQYPTLHPVPEGGGGL PGAQGCAALKNQVREQLGKLGWDDYHGWWLACGTGTTLAGLVLAETGQHAVYGAMAVPDDHGVAANVEALVGKAGGYELI DASRGGFAKVDPALLEFIAHAEQAGGIPLEPLYTGKALLALKQQVEAGRFARGSRLIFVHTGGLQGRRGFDG >Mature_311_residues PALCTEPAFMFLPPTDWLPQAPLEALHLDWLTAAGIEVAALRLDRIDPLISGNKWFKLVEHLKAADRAGAEGIISLGGAH SNHLHALAAAGKRLGFTTVGLLRGHPQDTPTVRDLQEFGMQLNWLGYGGYRARHEPGFWQSWLAQYPTLHPVPEGGGGLP GAQGCAALKNQVREQLGKLGWDDYHGWWLACGTGTTLAGLVLAETGQHAVYGAMAVPDDHGVAANVEALVGKAGGYELID ASRGGFAKVDPALLEFIAHAEQAGGIPLEPLYTGKALLALKQQVEAGRFARGSRLIFVHTGGLQGRRGFDG
Specific function: Unknown
COG id: COG2515
COG function: function code E; 1-aminocyclopropane-1-carboxylate deaminase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.5.99.7
Molecular weight: Translated: 33235; Mature: 33104
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPALCTEPAFMFLPPTDWLPQAPLEALHLDWLTAAGIEVAALRLDRIDPLISGNKWFKLV CCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEEHHHCCCCCCCHHHHHHH EHLKAADRAGAEGIISLGGAHSNHLHALAAAGKRLGFTTVGLLRGHPQDTPTVRDLQEFG HHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCCCCCEEEHHHCCCCCCCCHHHHHHHHC MQLNWLGYGGYRARHEPGFWQSWLAQYPTLHPVPEGGGGLPGAQGCAALKNQVREQLGKL CEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC GWDDYHGWWLACGTGTTLAGLVLAETGQHAVYGAMAVPDDHGVAANVEALVGKAGGYELI CCCCCCCEEEEECCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHCCCCCEEEE DASRGGFAKVDPALLEFIAHAEQAGGIPLEPLYTGKALLALKQQVEAGRFARGSRLIFVH ECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEE TGGLQGRRGFDG CCCCCCCCCCCC >Mature Secondary Structure PALCTEPAFMFLPPTDWLPQAPLEALHLDWLTAAGIEVAALRLDRIDPLISGNKWFKLV CCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEEHHHCCCCCCCHHHHHHH EHLKAADRAGAEGIISLGGAHSNHLHALAAAGKRLGFTTVGLLRGHPQDTPTVRDLQEFG HHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCCCCCEEEHHHCCCCCCCCHHHHHHHHC MQLNWLGYGGYRARHEPGFWQSWLAQYPTLHPVPEGGGGLPGAQGCAALKNQVREQLGKL CEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC GWDDYHGWWLACGTGTTLAGLVLAETGQHAVYGAMAVPDDHGVAANVEALVGKAGGYELI CCCCCCCEEEEECCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHCCCCCEEEE DASRGGFAKVDPALLEFIAHAEQAGGIPLEPLYTGKALLALKQQVEAGRFARGSRLIFVH ECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEE TGGLQGRRGFDG CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 1-aminocyclopropane-1-carboxylate; H2O
Specific reaction: 1-aminocyclopropane-1-carboxylate + H2O = 2-oxobutanoate + NH3
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA