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The map label for this gene is yebC [C]

Identifier: 77459899

GI number: 77459899

Start: 4160360

End: 4161064

Strand: Reverse

Name: yebC [C]

Synonym: Pfl01_3677

Alternate gene names: 77459899

Gene position: 4161064-4160360 (Counterclockwise)

Preceding gene: 77459901

Following gene: 77459896

Centisome position: 64.63

GC content: 61.42

Gene sequence:

>705_bases
ATGGGCGCACAGTGGAAGGTTAAACACAAAGAAGCGGCAGCCAACGCCAAGGGCAAGATCTTCGGCAAACTGGTGAAGGA
AATCACCATTGCTGCGCGTAACGGTGCCGATACCGCGACCAACGCACACCTGCGTCTGGTGGTCGAACAGGCCAAGAAGG
CCTCGATGCCCAAGGAAACCCTGGACCGCGCCATCAAGAAAGGCGCAGGCCTGCTGGGCGAAACCGTTCAGTACCATCGC
GTGACTTACGAAGGTTTCGCACCGCATCAGGTGCCGCTGATCGTCGAGTGCGTGACCGACAACATCAACCGCACCGTGGC
GGAAATCCGCGTGGCGTTCCGCAAGGGCCAACTGGGTGCTTCCGGTTCCGTTGCCTGGGACTTCAACCATGTCGGCATGA
TCGAAGCGTCGCCGGACACCCCGGACGCCGATCCGGAAATGGCCGCAATCGAAGCCGGCGCCCAGGATTTCGAGGCTGGC
GAAGAGGGCGCGACCCTGTTCCTGACCGATCCGACCGACCTCGATGCCGTGCAGAAAGCCCTGCCGGAACAAGGCTTCAC
CGTGCTGTCGGCCAAACTGGGCTATCAGCCGAAGAACCCGGTCAGCGGTCTGAGCGACGAGCAGATGGCTGAAGTCGAGG
CGTTCCTCGAAGGCCTGGACAACCATGACGACGTGCAGGATATGTTCGTCGGTCTGGCCGGCTGA

Upstream 100 bases:

>100_bases
CATCGGAATTTTTGGTCGATTGCCGACTTTAGGCCGTATAAACTTGGCGCCATGCGTCGGCCAATAGATGTCTCGGCGCC
ACAGATCAAGAGAGTGAGTA

Downstream 100 bases:

>100_bases
CAAACCGGAAAATCGCAGCCCTCGGGCTGCGATTTTTTTTCAGGCGTGTTGCAACGCCTGGCTGATCTCGCCAAACCCCG
GCCGCGCCAGCACATCCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MGAQWKVKHKEAAANAKGKIFGKLVKEITIAARNGADTATNAHLRLVVEQAKKASMPKETLDRAIKKGAGLLGETVQYHR
VTYEGFAPHQVPLIVECVTDNINRTVAEIRVAFRKGQLGASGSVAWDFNHVGMIEASPDTPDADPEMAAIEAGAQDFEAG
EEGATLFLTDPTDLDAVQKALPEQGFTVLSAKLGYQPKNPVSGLSDEQMAEVEAFLEGLDNHDDVQDMFVGLAG

Sequences:

>Translated_234_residues
MGAQWKVKHKEAAANAKGKIFGKLVKEITIAARNGADTATNAHLRLVVEQAKKASMPKETLDRAIKKGAGLLGETVQYHR
VTYEGFAPHQVPLIVECVTDNINRTVAEIRVAFRKGQLGASGSVAWDFNHVGMIEASPDTPDADPEMAAIEAGAQDFEAG
EEGATLFLTDPTDLDAVQKALPEQGFTVLSAKLGYQPKNPVSGLSDEQMAEVEAFLEGLDNHDDVQDMFVGLAG
>Mature_233_residues
GAQWKVKHKEAAANAKGKIFGKLVKEITIAARNGADTATNAHLRLVVEQAKKASMPKETLDRAIKKGAGLLGETVQYHRV
TYEGFAPHQVPLIVECVTDNINRTVAEIRVAFRKGQLGASGSVAWDFNHVGMIEASPDTPDADPEMAAIEAGAQDFEAGE
EGATLFLTDPTDLDAVQKALPEQGFTVLSAKLGYQPKNPVSGLSDEQMAEVEAFLEGLDNHDDVQDMFVGLAG

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=239, Percent_Identity=26.3598326359833, Blast_Score=72, Evalue=4e-13,
Organism=Escherichia coli, GI1788171, Length=233, Percent_Identity=36.0515021459227, Blast_Score=127, Evalue=7e-31,
Organism=Escherichia coli, GI1788294, Length=240, Percent_Identity=36.6666666666667, Blast_Score=119, Evalue=2e-28,
Organism=Saccharomyces cerevisiae, GI6321458, Length=257, Percent_Identity=27.2373540856031, Blast_Score=82, Evalue=7e-17,
Organism=Drosophila melanogaster, GI24583305, Length=243, Percent_Identity=28.3950617283951, Blast_Score=79, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3677_PSEPF (Q3K9Y9)

Other databases:

- EMBL:   CP000094
- RefSeq:   YP_349406.1
- ProteinModelPortal:   Q3K9Y9
- SMR:   Q3K9Y9
- STRING:   Q3K9Y9
- World-2DPAGE:   0008:Q3K9Y9
- GeneID:   3715123
- GenomeReviews:   CP000094_GR
- KEGG:   pfo:Pfl01_3677
- eggNOG:   COG0217
- HOGENOM:   HBG715231
- OMA:   QMAEVEA
- ProtClustDB:   PRK12378
- BioCyc:   PFLU205922:PFL_3677-MONOMER
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 25056; Mature: 24925

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAQWKVKHKEAAANAKGKIFGKLVKEITIAARNGADTATNAHLRLVVEQAKKASMPKET
CCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHH
LDRAIKKGAGLLGETVQYHRVTYEGFAPHQVPLIVECVTDNINRTVAEIRVAFRKGQLGA
HHHHHHHCCCHHHCCHHHHEEEECCCCCCCCCEEEEEHHCCHHHHHHHHHHHHHCCCCCC
SGSVAWDFNHVGMIEASPDTPDADPEMAAIEAGAQDFEAGEEGATLFLTDPTDLDAVQKA
CCCEEEECCCCEEEECCCCCCCCCCCHHHHHCCCHHHCCCCCCCEEEEECCCCHHHHHHH
LPEQGFTVLSAKLGYQPKNPVSGLSDEQMAEVEAFLEGLDNHDDVQDMFVGLAG
CCCCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCC
>Mature Secondary Structure 
GAQWKVKHKEAAANAKGKIFGKLVKEITIAARNGADTATNAHLRLVVEQAKKASMPKET
CCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHH
LDRAIKKGAGLLGETVQYHRVTYEGFAPHQVPLIVECVTDNINRTVAEIRVAFRKGQLGA
HHHHHHHCCCHHHCCHHHHEEEECCCCCCCCCEEEEEHHCCHHHHHHHHHHHHHCCCCCC
SGSVAWDFNHVGMIEASPDTPDADPEMAAIEAGAQDFEAGEEGATLFLTDPTDLDAVQKA
CCCEEEECCCCEEEECCCCCCCCCCCHHHHHCCCHHHCCCCCCCEEEEECCCCHHHHHHH
LPEQGFTVLSAKLGYQPKNPVSGLSDEQMAEVEAFLEGLDNHDDVQDMFVGLAG
CCCCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA