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The map label for this gene is yhcM [H]

Identifier: 77459897

GI number: 77459897

Start: 4157811

End: 4158944

Strand: Direct

Name: yhcM [H]

Synonym: Pfl01_3675

Alternate gene names: 77459897

Gene position: 4157811-4158944 (Clockwise)

Preceding gene: 77459889

Following gene: 77459898

Centisome position: 64.58

GC content: 63.14

Gene sequence:

>1134_bases
GTGCCCGCCCGACCGCCCGACCGTTCGCGTCTTATCCAGCGCTGGTCAGCCTTGCGCCATTTCTTCGGCAAACGCTCCGT
TACAAACGCGGGCCAGTGCGCTGCCAGCGCGCAATCGGTGCGTGACTATTTCCGGCAAAAGGCCCACGGCCAGGGCTACA
CCCTCAGCCACAGCCAGCAGCGGGTCATCGACTGCATGGCCCATCAGGCCGGTCTGTTGTTCGGCACCCCTGCGCAAACC
CCGCCCAGCCTGTATCTGCACGGAGCGGTCGGACGCGGCAAGAGCTGGTTGCTGGACGGATTTTTCCAGGCATTGCCCAT
CGAGCAAAAGCGCCGTCTGCACTTCCATGGATTTTTCGCCCAGTTGCATCAGGGCATGTTCGATCACCGCGATCGCGATG
ACGCGCTCGCCGTTACCCTCGATGCGCTGTTGATGGACTGTCGGGTGCTGTGTTTCGATGAATTTCACGTGCATGACATC
GGCGATGCGATGCTCATCACCCGCCTGTTCAAGGCACTGTTCAAGCGCGGGATCCTGTTGCTGATGACCTCCAACTACCC
GCCCGAAGGCTTGTTGCCCAATCCGCTGTATCACGCGCGGTTCAAACCGGTAATCGACCTGATCAATGCGCGCATGCAGG
TCATGGAAGTCGGCGGCCCCCACGATTACCGCAGCCAGGCGCGTCGGCACGCGCATCAGGTCTTCACCCAGGGCCATTAC
GTCTGGCCGGCCAGCCCGGCGCAGCGCCTCGCCTTGAACCTGCCGCCCCTTGATGCCGCGCCGTTGCCCTTGGCGGTCGG
CAGCCGGCATTTGCAGGCGCGGCTGTGCGAAGACCGGCGCGTCGGCTTCACCTTCAACGACCTCTGCGAACAGCCCACGG
CGGTGATGGATTATCTGGAACTGTGCCGGCGCTTCGACCACTGGATCATCGATGAACTGCCGGAACTGGGCGAATGTTCG
ATCGCCGCCCAGCAGCGGTTCATCAACCTGATCGACGTGCTCTACGACCAGGACAAACACCTGACCCTACTCGGCCAGCT
CCCGTTGCGCGAAAGCCTCGGTGGCCAGGCGATCGATCTGGCCCGCACCCGCAGCCGGCTCGGGCAATTGCGCGAAGTGC
ACGAACCAGGCTGA

Upstream 100 bases:

>100_bases
CGGAAAAACGATAAAGCGCAGTGGAAGCAAAACTACCCGTCTGGTTAAACTACCCCGCCGCGCTCCGGGGAGCCGGCCCG
ATGATGACGGAGTGATTGCA

Downstream 100 bases:

>100_bases
TTTGCCGTTATCATGCGGTCCATTTCCGGCGCCCTGCGCCTTCTCGATAGCGATCCTTTTTCATGCACACCCTTGCACAA
CTGCGCGCCGGCGAACTGTC

Product: AFG1-like ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MPARPPDRSRLIQRWSALRHFFGKRSVTNAGQCAASAQSVRDYFRQKAHGQGYTLSHSQQRVIDCMAHQAGLLFGTPAQT
PPSLYLHGAVGRGKSWLLDGFFQALPIEQKRRLHFHGFFAQLHQGMFDHRDRDDALAVTLDALLMDCRVLCFDEFHVHDI
GDAMLITRLFKALFKRGILLLMTSNYPPEGLLPNPLYHARFKPVIDLINARMQVMEVGGPHDYRSQARRHAHQVFTQGHY
VWPASPAQRLALNLPPLDAAPLPLAVGSRHLQARLCEDRRVGFTFNDLCEQPTAVMDYLELCRRFDHWIIDELPELGECS
IAAQQRFINLIDVLYDQDKHLTLLGQLPLRESLGGQAIDLARTRSRLGQLREVHEPG

Sequences:

>Translated_377_residues
MPARPPDRSRLIQRWSALRHFFGKRSVTNAGQCAASAQSVRDYFRQKAHGQGYTLSHSQQRVIDCMAHQAGLLFGTPAQT
PPSLYLHGAVGRGKSWLLDGFFQALPIEQKRRLHFHGFFAQLHQGMFDHRDRDDALAVTLDALLMDCRVLCFDEFHVHDI
GDAMLITRLFKALFKRGILLLMTSNYPPEGLLPNPLYHARFKPVIDLINARMQVMEVGGPHDYRSQARRHAHQVFTQGHY
VWPASPAQRLALNLPPLDAAPLPLAVGSRHLQARLCEDRRVGFTFNDLCEQPTAVMDYLELCRRFDHWIIDELPELGECS
IAAQQRFINLIDVLYDQDKHLTLLGQLPLRESLGGQAIDLARTRSRLGQLREVHEPG
>Mature_376_residues
PARPPDRSRLIQRWSALRHFFGKRSVTNAGQCAASAQSVRDYFRQKAHGQGYTLSHSQQRVIDCMAHQAGLLFGTPAQTP
PSLYLHGAVGRGKSWLLDGFFQALPIEQKRRLHFHGFFAQLHQGMFDHRDRDDALAVTLDALLMDCRVLCFDEFHVHDIG
DAMLITRLFKALFKRGILLLMTSNYPPEGLLPNPLYHARFKPVIDLINARMQVMEVGGPHDYRSQARRHAHQVFTQGHYV
WPASPAQRLALNLPPLDAAPLPLAVGSRHLQARLCEDRRVGFTFNDLCEQPTAVMDYLELCRRFDHWIIDELPELGECSI
AAQQRFINLIDVLYDQDKHLTLLGQLPLRESLGGQAIDLARTRSRLGQLREVHEPG

Specific function: Unknown

COG id: COG1485

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AFG1 ATPase family [H]

Homologues:

Organism=Homo sapiens, GI21918872, Length=339, Percent_Identity=29.2035398230088, Blast_Score=144, Evalue=9e-35,
Organism=Escherichia coli, GI1789627, Length=317, Percent_Identity=35.0157728706625, Blast_Score=171, Evalue=5e-44,
Organism=Caenorhabditis elegans, GI17505769, Length=286, Percent_Identity=31.1188811188811, Blast_Score=150, Evalue=1e-36,
Organism=Saccharomyces cerevisiae, GI6320783, Length=311, Percent_Identity=29.2604501607717, Blast_Score=128, Evalue=1e-30,
Organism=Drosophila melanogaster, GI20129913, Length=292, Percent_Identity=30.4794520547945, Blast_Score=129, Evalue=4e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005654 [H]

Pfam domain/function: PF03969 AFG1_ATPase [H]

EC number: NA

Molecular weight: Translated: 42883; Mature: 42752

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPARPPDRSRLIQRWSALRHFFGKRSVTNAGQCAASAQSVRDYFRQKAHGQGYTLSHSQQ
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
RVIDCMAHQAGLLFGTPAQTPPSLYLHGAVGRGKSWLLDGFFQALPIEQKRRLHFHGFFA
HHHHHHHHHCCCEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
QLHQGMFDHRDRDDALAVTLDALLMDCRVLCFDEFHVHDIGDAMLITRLFKALFKRGILL
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCEEE
LMTSNYPPEGLLPNPLYHARFKPVIDLINARMQVMEVGGPHDYRSQARRHAHQVFTQGHY
EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCE
VWPASPAQRLALNLPPLDAAPLPLAVGSRHLQARLCEDRRVGFTFNDLCEQPTAVMDYLE
ECCCCHHHHHEECCCCCCCCCCCHHHCCHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHH
LCRRFDHWIIDELPELGECSIAAQQRFINLIDVLYDQDKHLTLLGQLPLRESLGGQAIDL
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHCCCCHHHH
ARTRSRLGQLREVHEPG
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PARPPDRSRLIQRWSALRHFFGKRSVTNAGQCAASAQSVRDYFRQKAHGQGYTLSHSQQ
CCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
RVIDCMAHQAGLLFGTPAQTPPSLYLHGAVGRGKSWLLDGFFQALPIEQKRRLHFHGFFA
HHHHHHHHHCCCEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
QLHQGMFDHRDRDDALAVTLDALLMDCRVLCFDEFHVHDIGDAMLITRLFKALFKRGILL
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCEEE
LMTSNYPPEGLLPNPLYHARFKPVIDLINARMQVMEVGGPHDYRSQARRHAHQVFTQGHY
EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCE
VWPASPAQRLALNLPPLDAAPLPLAVGSRHLQARLCEDRRVGFTFNDLCEQPTAVMDYLE
ECCCCHHHHHEECCCCCCCCCCCHHHCCHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHH
LCRRFDHWIIDELPELGECSIAAQQRFINLIDVLYDQDKHLTLLGQLPLRESLGGQAIDL
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHCCCCHHHH
ARTRSRLGQLREVHEPG
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]