Click here to switch to the map view.

The map label for this gene is ygaY [H]

Identifier: 77459885

GI number: 77459885

Start: 4146834

End: 4148042

Strand: Direct

Name: ygaY [H]

Synonym: Pfl01_3663

Alternate gene names: 77459885

Gene position: 4146834-4148042 (Clockwise)

Preceding gene: 77459884

Following gene: 77459888

Centisome position: 64.41

GC content: 63.69

Gene sequence:

>1209_bases
ATGAAAACTGCAACATTCGATAAAGATGTCGTGCTGCTTTTCGCCATCGCCTGCGGCCTCGCGGTGGGCAACGTGTATTA
CGCCCAGCCGCTGCTGGATGCAATGGCCGACGCCTTCGGCCTGTCGCCGGGCAGCATCGGCATCGTCATGACGTTGACTC
AGGTCGGCTACGGCCTCGGGCTGTTGTTGCTCGTGCCCCTTGGCGACCTGCTCAACCGCCGGCGGCTGATCGTCACGCAA
ACGCTGTTGTCCGCCGCTGCCTTGCTGATGATCGCCTTGGCCTCGAACAGCGTCTGGCTACTGATCGGCGTCACCCTGAC
CGGCCTGCTGGCCGTGGTCACCCAGGTGTTGGTCGCCTACGCCGCAACCCTGGCCGTCCCGGCGCAACGCGGAAAGGTTG
TGGGCGTGATCACCAGCGGCATCGTCATCGGCATTCTGCTGGCGCGCACGGTGGCCGGCGGTATGGCTGATCTGGCCGGC
TGGCGCTCGATCTATCTGCTGTCAGCGGGATTGACGCTGGTGATGGCTGTGTTGCTGTTTCGGGTGTTACCCAAGGATGA
AGAAGCACGACCATCCACGCATTACGTGGCATTGATTGCCTCAGTGTTCAGCCTGTTTCGTGAAGAACCGGTGCTGCGCC
AACGTGCGATCCTCGCCCTGCTCACCTTCGCCAGCGCCATGGTGCTGTGGACGCCGATGGTGTTACCGCTGGCCGCCCCG
CCGCTGTCGCTTTCCCACAGTGAAATCGGATTGTTCGGACTCGCCGGCGCGGCGGGTGCACTCGCCGCCGCCAGAGCCGG
ACACCTGGCGGATCGAGGATTGGGGCAATGGGTAAGCGGTCTGTCGCTGCTGCTGATGCTCGGTTCGTGGTTGCCGATCG
CACTGACCCAGTCTTCGTTGTGGGCGTTGCTGCTTGGCGTCATCACCCTGGATCTGGGCTTGCAGGCCGTGCACGTCACC
AGCCAGAGCCTGATCTACAGCGTCCGCCCAGAGGCACAAAGCCGACTGACTGCCGGCTACATGCTGTTTTATTCAATGGG
CAGCGCCTTGGGCTCAATCGCCTCGACCGCCATGTACGCCTGGGCAGGATGGCCGGGCGTCTGCTGGCTGGGTGCCGCAA
TCAACGTGGTCGCGCTGCTGTACTGGTGGCGAACGCTGGCCACCCGGAAACGTGGCGAGGCTGCTTGCGCCCTCGCCACG
TCGGACTGA

Upstream 100 bases:

>100_bases
CTTTTTTTTGCGCCGACTTTTACCCAATCAGGTTGCAAATCAAAACCGGATTCCTTACCGTCGATCAAGTTTCAAATTGA
AACCTGAAAGGATCCGGGAC

Downstream 100 bases:

>100_bases
CACACTATCAACCGCGATTGCGTCCCCGCAGCATGCTGTCGAGCACCTCGTCGCGGCGCACCCAGCCATGGAACAGCGCC
GCCGCCAGGTGCAGCAGCAC

Product: twin-arginine translocation pathway signal protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MKTATFDKDVVLLFAIACGLAVGNVYYAQPLLDAMADAFGLSPGSIGIVMTLTQVGYGLGLLLLVPLGDLLNRRRLIVTQ
TLLSAAALLMIALASNSVWLLIGVTLTGLLAVVTQVLVAYAATLAVPAQRGKVVGVITSGIVIGILLARTVAGGMADLAG
WRSIYLLSAGLTLVMAVLLFRVLPKDEEARPSTHYVALIASVFSLFREEPVLRQRAILALLTFASAMVLWTPMVLPLAAP
PLSLSHSEIGLFGLAGAAGALAAARAGHLADRGLGQWVSGLSLLLMLGSWLPIALTQSSLWALLLGVITLDLGLQAVHVT
SQSLIYSVRPEAQSRLTAGYMLFYSMGSALGSIASTAMYAWAGWPGVCWLGAAINVVALLYWWRTLATRKRGEAACALAT
SD

Sequences:

>Translated_402_residues
MKTATFDKDVVLLFAIACGLAVGNVYYAQPLLDAMADAFGLSPGSIGIVMTLTQVGYGLGLLLLVPLGDLLNRRRLIVTQ
TLLSAAALLMIALASNSVWLLIGVTLTGLLAVVTQVLVAYAATLAVPAQRGKVVGVITSGIVIGILLARTVAGGMADLAG
WRSIYLLSAGLTLVMAVLLFRVLPKDEEARPSTHYVALIASVFSLFREEPVLRQRAILALLTFASAMVLWTPMVLPLAAP
PLSLSHSEIGLFGLAGAAGALAAARAGHLADRGLGQWVSGLSLLLMLGSWLPIALTQSSLWALLLGVITLDLGLQAVHVT
SQSLIYSVRPEAQSRLTAGYMLFYSMGSALGSIASTAMYAWAGWPGVCWLGAAINVVALLYWWRTLATRKRGEAACALAT
SD
>Mature_402_residues
MKTATFDKDVVLLFAIACGLAVGNVYYAQPLLDAMADAFGLSPGSIGIVMTLTQVGYGLGLLLLVPLGDLLNRRRLIVTQ
TLLSAAALLMIALASNSVWLLIGVTLTGLLAVVTQVLVAYAATLAVPAQRGKVVGVITSGIVIGILLARTVAGGMADLAG
WRSIYLLSAGLTLVMAVLLFRVLPKDEEARPSTHYVALIASVFSLFREEPVLRQRAILALLTFASAMVLWTPMVLPLAAP
PLSLSHSEIGLFGLAGAAGALAAARAGHLADRGLGQWVSGLSLLLMLGSWLPIALTQSSLWALLLGVITLDLGLQAVHVT
SQSLIYSVRPEAQSRLTAGYMLFYSMGSALGSIASTAMYAWAGWPGVCWLGAAINVVALLYWWRTLATRKRGEAACALAT
SD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=365, Percent_Identity=26.8493150684932, Blast_Score=92, Evalue=7e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42182; Mature: 42182

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTATFDKDVVLLFAIACGLAVGNVYYAQPLLDAMADAFGLSPGSIGIVMTLTQVGYGLG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
LLLLVPLGDLLNRRRLIVTQTLLSAAALLMIALASNSVWLLIGVTLTGLLAVVTQVLVAY
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHH
AATLAVPAQRGKVVGVITSGIVIGILLARTVAGGMADLAGWRSIYLLSAGLTLVMAVLLF
HHHHHCHHHCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RVLPKDEEARPSTHYVALIASVFSLFREEPVLRQRAILALLTFASAMVLWTPMVLPLAAP
HHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PLSLSHSEIGLFGLAGAAGALAAARAGHLADRGLGQWVSGLSLLLMLGSWLPIALTQSSL
CCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
WALLLGVITLDLGLQAVHVTSQSLIYSVRPEAQSRLTAGYMLFYSMGSALGSIASTAMYA
HHHHHHHHHHHHCCHHEEEHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WAGWPGVCWLGAAINVVALLYWWRTLATRKRGEAACALATSD
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC
>Mature Secondary Structure
MKTATFDKDVVLLFAIACGLAVGNVYYAQPLLDAMADAFGLSPGSIGIVMTLTQVGYGLG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
LLLLVPLGDLLNRRRLIVTQTLLSAAALLMIALASNSVWLLIGVTLTGLLAVVTQVLVAY
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHH
AATLAVPAQRGKVVGVITSGIVIGILLARTVAGGMADLAGWRSIYLLSAGLTLVMAVLLF
HHHHHCHHHCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RVLPKDEEARPSTHYVALIASVFSLFREEPVLRQRAILALLTFASAMVLWTPMVLPLAAP
HHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PLSLSHSEIGLFGLAGAAGALAAARAGHLADRGLGQWVSGLSLLLMLGSWLPIALTQSSL
CCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
WALLLGVITLDLGLQAVHVTSQSLIYSVRPEAQSRLTAGYMLFYSMGSALGSIASTAMYA
HHHHHHHHHHHHCCHHEEEHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WAGWPGVCWLGAAINVVALLYWWRTLATRKRGEAACALATSD
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]