Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is accA1 [H]
Identifier: 77459881
GI number: 77459881
Start: 4141942
End: 4143891
Strand: Direct
Name: accA1 [H]
Synonym: Pfl01_3659
Alternate gene names: 77459881
Gene position: 4141942-4143891 (Clockwise)
Preceding gene: 77459880
Following gene: 77459883
Centisome position: 64.33
GC content: 62.51
Gene sequence:
>1950_bases ATGAGCGCACCTGTTCTCACCACCCTGCTGGTGGCCAACCGTGGCGAAATCGCTTGCCGGGTCATGCGTACCGCCAAGGC GCTGGGCCTGACCACCGTTGCCGTGCACAGCGCCACCGACCGCGAAGCGCGGCACAGCCGTGAAGCGGATATCCGCGTCG ATCTGGGCGGCAGCAAAGCGGCCGACAGCTATCTGCAAATCGACAAACTGATCGCAGCGGCCAAGGCCAGCGGCGCTCAG GCGATTCATCCGGGGTATGGCTTTCTGTCGGAGAACGCCGGTTTTGCCCGCGCCATCGAAGCCGCCGGCCTGATTTTCCT CGGCCCGCCCGCCTCGGCCATCGATGCGATGGGCAGCAAATCCGCCGCCAAATCCCTGATGGAAACCGCCGGCGTGCCGC TGGTGCCGGGTTATCACGGTGAGGCTCAGGATCTTGATACCTTCCGCGATGCTTGCGAACGCATCGGTTATCCGGTGTTG CTCAAAGCCACAGCCGGCGGTGGCGGTAAAGGTATGAAAGTTGTCGAGGACGTCAGCCAATTGGGTGAAGCGCTGGCCTC GGCTCAGCGTGAAGCGCAGTCGTCGTTCGGTGACTCGCGGATGCTGGTGGAGAAATACCTGCTCAAGCCGCGTCACGTGG AAATCCAGGTGTTCGCCGATCAGCATGGCAATTGCCTGTACCTGAATGAGCGCGACTGCTCGATTCAGCGTCGGCACCAG AAGGTCGTCGAAGAGGCGCCGGCACCGGGCCTCAGTCCGGAACTGCGTCGGGCGATGGGCGAAGCGGCGGTGCGTTCGGC GCAGGCCATCGGCTACGTCGGCGCCGGCACGGTGGAATTTCTGCTGGACGCGCGCGGCGAGTTTTTCTTCATGGAGATGA ACACGCGGCTACAGGTCGAACACCCGGTCACCGAAGCCATTACCGGGCTCGATCTGGTGGCCTGGCAGATTCGCGTCGCC CGTGGCGAAGCGTTGCCGATCACTCAGGATCAAGTGCCGCTGAACGGGCATGCAATTGAAGTGCGGTTGTATGCGGAAGA TCCGTCGAATGATTTTCTGCCGGCGACCGGGCGTCTGGATCTGTATCGCGAATCCGCCGCAGGGCCGGGGCGCCGTGTGG ACAGCGGCGTTGAAGAAGGCGACGAGATTTCACCGTTCTATGACCCGATGCTCGGCAAGCTGATTGCCTGGGGCGAAGAT CGTGAGCAGGCGCGTTTACGGCTGCTGAGCATGCTCGACGAGTTTGCGATTGGCGGGCTGAAGACCAACATCAACTTCTT GCGGCGGATCATCGGGCATCCGGCGTTTGCGGCGGCCGAGCTGGATACCGGGTTCATTCCGCGTTATCAGGAACAACTGT TACCAGCGCCTGCTGCGCTGAGCGATGAATTCTGGGAGGCGGCGGCGCAGGCTTTTGCGCAGAGCCTGCCGGAGATGGCT AGGGCGGATGATCCCGCTTCGCCTTGGGCGCTTCAGAGCGGTCTGCGCGCTGGGTTGCCACGGGAAATCACTCTGCATTT GAGTTGCGAGGGGCAGGATCGGGCGTTGACGCTCGGCGCTGGCGGCAAAGCAAAACTGATCGGCGAACAACTGGTGCTCG AGCACGATGGGCTGCGCCGACAACTGCGTGCGATTCGTCGTGGAGAGGCTCTGTTTCTGCAATGGGACGGCGAGCTGCGA CGCGTTGAAACGTACGACCCGATCAGCGCTGTCGAAGCTAGTCACAGCCATCAAGGCGGTCTGACGGCGCCGATGAACGG CAGCATCGTGCGGGTGCTGGTGGAGGCCGGGCAATCGGTTGAAGCCGGGGCGCAATTGGTGGTGCTGGAAGCGATGAAGA TGGAGCACAGCATCCGCGCGCCCCATGCCGGCGTGATCAAGGTGCTGTATTGCCAGGAAGGCGAAATGGTCAGCGAAGGC AGTGCACTGGTCGAACTGGAAGAAGCTTGA
Upstream 100 bases:
>100_bases GCATCCGCGTCAGCCCGGAAGGCCAGGAAGGTCTGCGGGCCTTTCTGCAGAAGCGTCCGCCGAGCTGGCAAGCCGCAATC ACCACCAAGGAGCCGCGTTG
Downstream 100 bases:
>100_bases AAGGTGGATCGATCCTACGCTTGGCGAGGATCGATCTGACTAGTATTTGGCGGTTGCCTGAACCACGACACCGATAATTC GACACTCGTCGGTCAACAAG
Product: 3-methylcrotonoyl-CoA carboxylase subunit alpha
Products: NA
Alternate protein names: Biotin carboxylase; Biotin carboxyl carrier protein; BCCP [H]
Number of amino acids: Translated: 649; Mature: 648
Protein sequence:
>649_residues MSAPVLTTLLVANRGEIACRVMRTAKALGLTTVAVHSATDREARHSREADIRVDLGGSKAADSYLQIDKLIAAAKASGAQ AIHPGYGFLSENAGFARAIEAAGLIFLGPPASAIDAMGSKSAAKSLMETAGVPLVPGYHGEAQDLDTFRDACERIGYPVL LKATAGGGGKGMKVVEDVSQLGEALASAQREAQSSFGDSRMLVEKYLLKPRHVEIQVFADQHGNCLYLNERDCSIQRRHQ KVVEEAPAPGLSPELRRAMGEAAVRSAQAIGYVGAGTVEFLLDARGEFFFMEMNTRLQVEHPVTEAITGLDLVAWQIRVA RGEALPITQDQVPLNGHAIEVRLYAEDPSNDFLPATGRLDLYRESAAGPGRRVDSGVEEGDEISPFYDPMLGKLIAWGED REQARLRLLSMLDEFAIGGLKTNINFLRRIIGHPAFAAAELDTGFIPRYQEQLLPAPAALSDEFWEAAAQAFAQSLPEMA RADDPASPWALQSGLRAGLPREITLHLSCEGQDRALTLGAGGKAKLIGEQLVLEHDGLRRQLRAIRRGEALFLQWDGELR RVETYDPISAVEASHSHQGGLTAPMNGSIVRVLVEAGQSVEAGAQLVVLEAMKMEHSIRAPHAGVIKVLYCQEGEMVSEG SALVELEEA
Sequences:
>Translated_649_residues MSAPVLTTLLVANRGEIACRVMRTAKALGLTTVAVHSATDREARHSREADIRVDLGGSKAADSYLQIDKLIAAAKASGAQ AIHPGYGFLSENAGFARAIEAAGLIFLGPPASAIDAMGSKSAAKSLMETAGVPLVPGYHGEAQDLDTFRDACERIGYPVL LKATAGGGGKGMKVVEDVSQLGEALASAQREAQSSFGDSRMLVEKYLLKPRHVEIQVFADQHGNCLYLNERDCSIQRRHQ KVVEEAPAPGLSPELRRAMGEAAVRSAQAIGYVGAGTVEFLLDARGEFFFMEMNTRLQVEHPVTEAITGLDLVAWQIRVA RGEALPITQDQVPLNGHAIEVRLYAEDPSNDFLPATGRLDLYRESAAGPGRRVDSGVEEGDEISPFYDPMLGKLIAWGED REQARLRLLSMLDEFAIGGLKTNINFLRRIIGHPAFAAAELDTGFIPRYQEQLLPAPAALSDEFWEAAAQAFAQSLPEMA RADDPASPWALQSGLRAGLPREITLHLSCEGQDRALTLGAGGKAKLIGEQLVLEHDGLRRQLRAIRRGEALFLQWDGELR RVETYDPISAVEASHSHQGGLTAPMNGSIVRVLVEAGQSVEAGAQLVVLEAMKMEHSIRAPHAGVIKVLYCQEGEMVSEG SALVELEEA >Mature_648_residues SAPVLTTLLVANRGEIACRVMRTAKALGLTTVAVHSATDREARHSREADIRVDLGGSKAADSYLQIDKLIAAAKASGAQA IHPGYGFLSENAGFARAIEAAGLIFLGPPASAIDAMGSKSAAKSLMETAGVPLVPGYHGEAQDLDTFRDACERIGYPVLL KATAGGGGKGMKVVEDVSQLGEALASAQREAQSSFGDSRMLVEKYLLKPRHVEIQVFADQHGNCLYLNERDCSIQRRHQK VVEEAPAPGLSPELRRAMGEAAVRSAQAIGYVGAGTVEFLLDARGEFFFMEMNTRLQVEHPVTEAITGLDLVAWQIRVAR GEALPITQDQVPLNGHAIEVRLYAEDPSNDFLPATGRLDLYRESAAGPGRRVDSGVEEGDEISPFYDPMLGKLIAWGEDR EQARLRLLSMLDEFAIGGLKTNINFLRRIIGHPAFAAAELDTGFIPRYQEQLLPAPAALSDEFWEAAAQAFAQSLPEMAR ADDPASPWALQSGLRAGLPREITLHLSCEGQDRALTLGAGGKAKLIGEQLVLEHDGLRRQLRAIRRGEALFLQWDGELRR VETYDPISAVEASHSHQGGLTAPMNGSIVRVLVEAGQSVEAGAQLVVLEAMKMEHSIRAPHAGVIKVLYCQEGEMVSEGS ALVELEEA
Specific function: This protein carries two functions:biotin carboxyl carrier protein and biotin carboxyltransferase [H]
COG id: COG4770
COG function: function code I; Acetyl/propionyl-CoA carboxylase, alpha subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 biotinyl-binding domain [H]
Homologues:
Organism=Homo sapiens, GI116805327, Length=669, Percent_Identity=46.6367713004484, Blast_Score=598, Evalue=1e-171, Organism=Homo sapiens, GI65506442, Length=668, Percent_Identity=42.814371257485, Blast_Score=493, Evalue=1e-139, Organism=Homo sapiens, GI189095269, Length=668, Percent_Identity=42.814371257485, Blast_Score=493, Evalue=1e-139, Organism=Homo sapiens, GI295821183, Length=656, Percent_Identity=42.3780487804878, Blast_Score=474, Evalue=1e-133, Organism=Homo sapiens, GI106049528, Length=458, Percent_Identity=45.1965065502183, Blast_Score=372, Evalue=1e-103, Organism=Homo sapiens, GI106049295, Length=458, Percent_Identity=45.1965065502183, Blast_Score=372, Evalue=1e-103, Organism=Homo sapiens, GI106049292, Length=458, Percent_Identity=45.1965065502183, Blast_Score=372, Evalue=1e-103, Organism=Homo sapiens, GI38679977, Length=506, Percent_Identity=30.6324110671937, Blast_Score=249, Evalue=5e-66, Organism=Homo sapiens, GI38679967, Length=506, Percent_Identity=30.6324110671937, Blast_Score=249, Evalue=5e-66, Organism=Homo sapiens, GI38679960, Length=506, Percent_Identity=30.6324110671937, Blast_Score=249, Evalue=6e-66, Organism=Homo sapiens, GI38679971, Length=506, Percent_Identity=30.6324110671937, Blast_Score=249, Evalue=6e-66, Organism=Homo sapiens, GI38679974, Length=506, Percent_Identity=30.6324110671937, Blast_Score=249, Evalue=6e-66, Organism=Homo sapiens, GI134142062, Length=733, Percent_Identity=27.8308321964529, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI18105007, Length=322, Percent_Identity=25.776397515528, Blast_Score=73, Evalue=8e-13, Organism=Escherichia coli, GI1789654, Length=433, Percent_Identity=51.0392609699769, Blast_Score=423, Evalue=1e-119, Organism=Caenorhabditis elegans, GI71987519, Length=666, Percent_Identity=47.2972972972973, Blast_Score=558, Evalue=1e-159, Organism=Caenorhabditis elegans, GI17567343, Length=680, Percent_Identity=43.5294117647059, Blast_Score=506, Evalue=1e-143, Organism=Caenorhabditis elegans, GI17562816, Length=490, Percent_Identity=41.6326530612245, Blast_Score=358, Evalue=4e-99, Organism=Caenorhabditis elegans, GI133931226, Length=705, Percent_Identity=26.3829787234043, Blast_Score=207, Evalue=2e-53, Organism=Caenorhabditis elegans, GI71997168, Length=506, Percent_Identity=29.0513833992095, Blast_Score=204, Evalue=1e-52, Organism=Caenorhabditis elegans, GI71997163, Length=506, Percent_Identity=29.0513833992095, Blast_Score=204, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6319685, Length=448, Percent_Identity=43.75, Blast_Score=381, Evalue=1e-106, Organism=Saccharomyces cerevisiae, GI6319695, Length=445, Percent_Identity=44.7191011235955, Blast_Score=356, Evalue=7e-99, Organism=Saccharomyces cerevisiae, GI6321376, Length=445, Percent_Identity=45.3932584269663, Blast_Score=354, Evalue=2e-98, Organism=Saccharomyces cerevisiae, GI6324343, Length=728, Percent_Identity=28.4340659340659, Blast_Score=247, Evalue=5e-66, Organism=Saccharomyces cerevisiae, GI6323863, Length=676, Percent_Identity=28.4023668639053, Blast_Score=246, Evalue=6e-66, Organism=Saccharomyces cerevisiae, GI6322569, Length=227, Percent_Identity=25.9911894273128, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI24651757, Length=672, Percent_Identity=44.3452380952381, Blast_Score=538, Evalue=1e-153, Organism=Drosophila melanogaster, GI24651759, Length=635, Percent_Identity=43.7795275590551, Blast_Score=493, Evalue=1e-139, Organism=Drosophila melanogaster, GI281363050, Length=516, Percent_Identity=44.3798449612403, Blast_Score=381, Evalue=1e-105, Organism=Drosophila melanogaster, GI24652224, Length=516, Percent_Identity=44.3798449612403, Blast_Score=381, Evalue=1e-105, Organism=Drosophila melanogaster, GI24652222, Length=516, Percent_Identity=44.3798449612403, Blast_Score=381, Evalue=1e-105, Organism=Drosophila melanogaster, GI24652220, Length=516, Percent_Identity=44.3798449612403, Blast_Score=381, Evalue=1e-105, Organism=Drosophila melanogaster, GI24652218, Length=516, Percent_Identity=44.3798449612403, Blast_Score=381, Evalue=1e-105, Organism=Drosophila melanogaster, GI24652212, Length=446, Percent_Identity=47.5336322869955, Blast_Score=379, Evalue=1e-105, Organism=Drosophila melanogaster, GI24652210, Length=446, Percent_Identity=47.5336322869955, Blast_Score=379, Evalue=1e-105, Organism=Drosophila melanogaster, GI24652214, Length=446, Percent_Identity=47.5336322869955, Blast_Score=379, Evalue=1e-105, Organism=Drosophila melanogaster, GI19921944, Length=446, Percent_Identity=47.5336322869955, Blast_Score=379, Evalue=1e-105, Organism=Drosophila melanogaster, GI24652216, Length=446, Percent_Identity=47.5336322869955, Blast_Score=379, Evalue=1e-105, Organism=Drosophila melanogaster, GI161076409, Length=706, Percent_Identity=28.1869688385269, Blast_Score=258, Evalue=6e-69, Organism=Drosophila melanogaster, GI161076407, Length=706, Percent_Identity=28.1869688385269, Blast_Score=258, Evalue=7e-69, Organism=Drosophila melanogaster, GI24586460, Length=706, Percent_Identity=28.1869688385269, Blast_Score=258, Evalue=7e-69, Organism=Drosophila melanogaster, GI24586458, Length=706, Percent_Identity=28.1869688385269, Blast_Score=258, Evalue=7e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR001882 - InterPro: IPR011764 - InterPro: IPR005482 - InterPro: IPR000089 - InterPro: IPR005479 - InterPro: IPR005481 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 - InterPro: IPR011053 [H]
Pfam domain/function: PF02785 Biotin_carb_C; PF00364 Biotin_lipoyl; PF00289 CPSase_L_chain; PF02786 CPSase_L_D2 [H]
EC number: =6.3.4.14 [H]
Molecular weight: Translated: 69898; Mature: 69767
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: PS50975 ATP_GRASP ; PS00866 CPSASE_1 ; PS00867 CPSASE_2 ; PS50979 BC ; PS50968 BIOTINYL_LIPOYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPVLTTLLVANRGEIACRVMRTAKALGLTTVAVHSATDREARHSREADIRVDLGGSKA CCCCCEEHHHHCCCCHHHHHHHHHHHHHCEEEEEEECCCCHHHHCCCCCCEEEECCCCHH ADSYLQIDKLIAAAKASGAQAIHPGYGFLSENAGFARAIEAAGLIFLGPPASAIDAMGSK HHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCHHHHHHHCCEEEECCCHHHHHHCCCH SAAKSLMETAGVPLVPGYHGEAQDLDTFRDACERIGYPVLLKATAGGGGKGMKVVEDVSQ HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHH LGEALASAQREAQSSFGDSRMLVEKYLLKPRHVEIQVFADQHGNCLYLNERDCSIQRRHQ HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCHHHHHHH KVVEEAPAPGLSPELRRAMGEAAVRSAQAIGYVGAGTVEFLLDARGEFFFMEMNTRLQVE HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEECCEEEEC HPVTEAITGLDLVAWQIRVARGEALPITQDQVPLNGHAIEVRLYAEDPSNDFLPATGRLD CCHHHHHHCHHHEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEE LYRESAAGPGRRVDSGVEEGDEISPFYDPMLGKLIAWGEDREQARLRLLSMLDEFAIGGL EHECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCH KTNINFLRRIIGHPAFAAAELDTGFIPRYQEQLLPAPAALSDEFWEAAAQAFAQSLPEMA HHHHHHHHHHHCCCCCEEHHCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH RADDPASPWALQSGLRAGLPREITLHLSCEGQDRALTLGAGGKAKLIGEQLVLEHDGLRR HCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHH QLRAIRRGEALFLQWDGELRRVETYDPISAVEASHSHQGGLTAPMNGSIVRVLVEAGQSV HHHHHHCCCEEEEEECCCEEEEECCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCC EAGAQLVVLEAMKMEHSIRAPHAGVIKVLYCQEGEMVSEGSALVELEEA CCCCEEEEHHHHHHHHHCCCCCCCEEEEEEECCCCEECCCCEEEEEECC >Mature Secondary Structure SAPVLTTLLVANRGEIACRVMRTAKALGLTTVAVHSATDREARHSREADIRVDLGGSKA CCCCEEHHHHCCCCHHHHHHHHHHHHHCEEEEEEECCCCHHHHCCCCCCEEEECCCCHH ADSYLQIDKLIAAAKASGAQAIHPGYGFLSENAGFARAIEAAGLIFLGPPASAIDAMGSK HHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCHHHHHHHCCEEEECCCHHHHHHCCCH SAAKSLMETAGVPLVPGYHGEAQDLDTFRDACERIGYPVLLKATAGGGGKGMKVVEDVSQ HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHH LGEALASAQREAQSSFGDSRMLVEKYLLKPRHVEIQVFADQHGNCLYLNERDCSIQRRHQ HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCHHHHHHH KVVEEAPAPGLSPELRRAMGEAAVRSAQAIGYVGAGTVEFLLDARGEFFFMEMNTRLQVE HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEECCEEEEC HPVTEAITGLDLVAWQIRVARGEALPITQDQVPLNGHAIEVRLYAEDPSNDFLPATGRLD CCHHHHHHCHHHEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEE LYRESAAGPGRRVDSGVEEGDEISPFYDPMLGKLIAWGEDREQARLRLLSMLDEFAIGGL EHECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCH KTNINFLRRIIGHPAFAAAELDTGFIPRYQEQLLPAPAALSDEFWEAAAQAFAQSLPEMA HHHHHHHHHHHCCCCCEEHHCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH RADDPASPWALQSGLRAGLPREITLHLSCEGQDRALTLGAGGKAKLIGEQLVLEHDGLRR HCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHH QLRAIRRGEALFLQWDGELRRVETYDPISAVEASHSHQGGLTAPMNGSIVRVLVEAGQSV HHHHHHCCCEEEEEECCCEEEEECCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCC EAGAQLVVLEAMKMEHSIRAPHAGVIKVLYCQEGEMVSEGSALVELEEA CCCCEEEEHHHHHHHHHCCCCCCCEEEEEEECCCCEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]