Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is pstS [H]
Identifier: 77459872
GI number: 77459872
Start: 4130548
End: 4131882
Strand: Direct
Name: pstS [H]
Synonym: Pfl01_3650
Alternate gene names: 77459872
Gene position: 4130548-4131882 (Clockwise)
Preceding gene: 77459871
Following gene: 77459874
Centisome position: 64.15
GC content: 61.42
Gene sequence:
>1335_bases ATGACCCTGCGTGTTCTGTTCGTCTTTCTCCTGAGCGCCTGGCTGCAGGTTTCGGCCGCGGCATTGCCCATTCCCGAGAA CGGCCCGGTATTGCGCATCCAGGGTTCCAACACCATTGGCGCGGCGCTCGGCCCGGCGTTGGTGGAAGGCCTGTTGCAAG ACCAGGGACTGTTGAAAGTCCACAGCGAAACCCCGGACACCGCCAACGAACAACGGATCGTCGGCCTGACGGCCCAAGGC CAAAGGGTCGTGGTGGAGATCGCCGCCCACGGTTCGAGCACCGGTTTCACTGCACTCAAGAACGCCAGCGCCGATCTGGC CGCCTCGTCGCGCCCGATCAAGGACAGCGAACTGCTGAACCTGCAAGCCCGGGGCGATCTGAAAAGCCCCGGTGCCGAGC AAGTCATCGCCATCGATGGTCTGGCGATCATCCTTCACCCCGACAATTCGCTGAATCAACTGAACACCGAACAACTGGCG CGAATCTTCAGCGGCGAGGCGAAGACGTGGGAAGACGTCGGCGGCAAGGGTGGGACGATTCATTTATATGCGCGGGATGA TCAGTCCGGTACGTACGACACGTTCAAGGAACTTGTCCTCAGTCGTCGTGGGAAATCCCTGAGCAATGCCGCGAAACGGT TTGAATCCAGCGAGCAGTTGTCCGACGCAGTCAGTGCCGATCCGCAGGCCATCGGTTTCATCGGCCTGCCCTATGTGCGT CAGGCCAAAGCCGTGGCGATTGTCGACGGGCAGTCCCAGGCAATGCTGCCGCTCGCCAGCCTGATCGCCACCGAAGACTA TCCACTGTCGCGGCGGCTGTTCTTCTATCTGCCGCCCGACAGCAACAATCCCTGGGCCAGGGCGTTGGTGGAGTTTGCGC AGAGCCGCCAGGGTCAGGCGATTGTCGCGGCCAACGGTTTTATCGCCCAGACCGTGCAGGCTATCGCCGTCACGCCGAAT GCGCTGATGCCCGAGGGTTATCAATCCCTCAGCCGCCACGCCCAGCGTCTGACGGTGAACTTCCGCTTCGAAGAAGGTAG CGCCAGCCTCGACAACAAGGCCCGTCAGGATCTGGCCCGGGTGTTCGACTATATAAAGCACCACGACAAGACCGACCGCG CGGTAACACTGGTGGGCTTCGGCGACGCCAAAGACGACCCGGCACGGGCTGATTTACTGTCGAAGCTGCGGGCGATGGCG GTACGCCGAGAGTTGGTGAAAAACGGCGTGGTATTGCGCGAAGTGCGGGGGTTTGGCGCGCTGATGCCGGTGGCAACCAA CAGCGGTGATGAAGGCAGGATCAAGAATCGGCGGGTTGAGGTTTGGGTTTACTGA
Upstream 100 bases:
>100_bases AGATCACAGCCGGCGGTTGTGATCTTCTGTCCTGTCATCTTTCAGCAACCTCACTGACTTAATCTCCCCGGCAATCCCCT TGGCTGCAATCGGTGCCGGC
Downstream 100 bases:
>100_bases ACCTCCCCGATCGCTCCCACGCAGAGCCGTGATCGCTCCCACGCAGTACGCTGATCGTTCCCACGCTCTGCGTGGGAATG CATACAGTGACGCTCCGCGT
Product: OmpA/MotB
Products: NA
Alternate protein names: PBP [H]
Number of amino acids: Translated: 444; Mature: 443
Protein sequence:
>444_residues MTLRVLFVFLLSAWLQVSAAALPIPENGPVLRIQGSNTIGAALGPALVEGLLQDQGLLKVHSETPDTANEQRIVGLTAQG QRVVVEIAAHGSSTGFTALKNASADLAASSRPIKDSELLNLQARGDLKSPGAEQVIAIDGLAIILHPDNSLNQLNTEQLA RIFSGEAKTWEDVGGKGGTIHLYARDDQSGTYDTFKELVLSRRGKSLSNAAKRFESSEQLSDAVSADPQAIGFIGLPYVR QAKAVAIVDGQSQAMLPLASLIATEDYPLSRRLFFYLPPDSNNPWARALVEFAQSRQGQAIVAANGFIAQTVQAIAVTPN ALMPEGYQSLSRHAQRLTVNFRFEEGSASLDNKARQDLARVFDYIKHHDKTDRAVTLVGFGDAKDDPARADLLSKLRAMA VRRELVKNGVVLREVRGFGALMPVATNSGDEGRIKNRRVEVWVY
Sequences:
>Translated_444_residues MTLRVLFVFLLSAWLQVSAAALPIPENGPVLRIQGSNTIGAALGPALVEGLLQDQGLLKVHSETPDTANEQRIVGLTAQG QRVVVEIAAHGSSTGFTALKNASADLAASSRPIKDSELLNLQARGDLKSPGAEQVIAIDGLAIILHPDNSLNQLNTEQLA RIFSGEAKTWEDVGGKGGTIHLYARDDQSGTYDTFKELVLSRRGKSLSNAAKRFESSEQLSDAVSADPQAIGFIGLPYVR QAKAVAIVDGQSQAMLPLASLIATEDYPLSRRLFFYLPPDSNNPWARALVEFAQSRQGQAIVAANGFIAQTVQAIAVTPN ALMPEGYQSLSRHAQRLTVNFRFEEGSASLDNKARQDLARVFDYIKHHDKTDRAVTLVGFGDAKDDPARADLLSKLRAMA VRRELVKNGVVLREVRGFGALMPVATNSGDEGRIKNRRVEVWVY >Mature_443_residues TLRVLFVFLLSAWLQVSAAALPIPENGPVLRIQGSNTIGAALGPALVEGLLQDQGLLKVHSETPDTANEQRIVGLTAQGQ RVVVEIAAHGSSTGFTALKNASADLAASSRPIKDSELLNLQARGDLKSPGAEQVIAIDGLAIILHPDNSLNQLNTEQLAR IFSGEAKTWEDVGGKGGTIHLYARDDQSGTYDTFKELVLSRRGKSLSNAAKRFESSEQLSDAVSADPQAIGFIGLPYVRQ AKAVAIVDGQSQAMLPLASLIATEDYPLSRRLFFYLPPDSNNPWARALVEFAQSRQGQAIVAANGFIAQTVQAIAVTPNA LMPEGYQSLSRHAQRLTVNFRFEEGSASLDNKARQDLARVFDYIKHHDKTDRAVTLVGFGDAKDDPARADLLSKLRAMAV RRELVKNGVVLREVRGFGALMPVATNSGDEGRIKNRRVEVWVY
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48028; Mature: 47897
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: PS51123 OMPA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLRVLFVFLLSAWLQVSAAALPIPENGPVLRIQGSNTIGAALGPALVEGLLQDQGLLKV CHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEE HSETPDTANEQRIVGLTAQGQRVVVEIAAHGSSTGFTALKNASADLAASSRPIKDSELLN ECCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCHHHHCCCCCHHCCCCCCCCCCEEE LQARGDLKSPGAEQVIAIDGLAIILHPDNSLNQLNTEQLARIFSGEAKTWEDVGGKGGTI EEECCCCCCCCCCEEEEECCEEEEECCCCCCCCCCHHHHHHHHCCCCCCHHHCCCCCCEE HLYARDDQSGTYDTFKELVLSRRGKSLSNAAKRFESSEQLSDAVSADPQAIGFIGLPYVR EEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCHHH QAKAVAIVDGQSQAMLPLASLIATEDYPLSRRLFFYLPPDSNNPWARALVEFAQSRQGQA CCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCE IVAANGFIAQTVQAIAVTPNALMPEGYQSLSRHAQRLTVNFRFEEGSASLDNKARQDLAR EEEECCHHHHHHHHHEECCCCCCCCHHHHHHHHHHEEEEEEEEECCCCCCHHHHHHHHHH VFDYIKHHDKTDRAVTLVGFGDAKDDPARADLLSKLRAMAVRRELVKNGVVLREVRGFGA HHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEHHCCCC LMPVATNSGDEGRIKNRRVEVWVY EEEEECCCCCCCCCCCCEEEEEEC >Mature Secondary Structure TLRVLFVFLLSAWLQVSAAALPIPENGPVLRIQGSNTIGAALGPALVEGLLQDQGLLKV HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEE HSETPDTANEQRIVGLTAQGQRVVVEIAAHGSSTGFTALKNASADLAASSRPIKDSELLN ECCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCHHHHCCCCCHHCCCCCCCCCCEEE LQARGDLKSPGAEQVIAIDGLAIILHPDNSLNQLNTEQLARIFSGEAKTWEDVGGKGGTI EEECCCCCCCCCCEEEEECCEEEEECCCCCCCCCCHHHHHHHHCCCCCCHHHCCCCCCEE HLYARDDQSGTYDTFKELVLSRRGKSLSNAAKRFESSEQLSDAVSADPQAIGFIGLPYVR EEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCHHH QAKAVAIVDGQSQAMLPLASLIATEDYPLSRRLFFYLPPDSNNPWARALVEFAQSRQGQA CCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCE IVAANGFIAQTVQAIAVTPNALMPEGYQSLSRHAQRLTVNFRFEEGSASLDNKARQDLAR EEEECCHHHHHHHHHEECCCCCCCCHHHHHHHHHHEEEEEEEEECCCCCCHHHHHHHHHH VFDYIKHHDKTDRAVTLVGFGDAKDDPARADLLSKLRAMAVRRELVKNGVVLREVRGFGA HHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEHHCCCC LMPVATNSGDEGRIKNRRVEVWVY EEEEECCCCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA