| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459850
Identifier: 77459850
GI number: 77459850
Start: 4101939
End: 4102889
Strand: Direct
Name: 77459850
Synonym: Pfl01_3628
Alternate gene names: NA
Gene position: 4101939-4102889 (Clockwise)
Preceding gene: 77459849
Following gene: 77459851
Centisome position: 63.71
GC content: 60.88
Gene sequence:
>951_bases ATGAACCGACCCGATCGCAACCGGGAGCTGACACTGGCCCGATCCATGCGCCTTTACCTCAACGAGAACGGCGCTGTTGG TCACTACCTCGAACCACGAGGCAGCGGACTGCATTACATTTTTTTCCTGCGGGTGAACGATGAGCTCTGGGTCGGCCGCA AGCTCCTGCAACGTGACCGGCATTTTCGGTGGCAGGCCGGCAGCGCACTCAAACCCGGCATGCTGTTTGGCCCGCATCTG CATTCATTGTGGGGAGATGACGGGTTGTCGATCGGCTATCGGACAGCCTCCCCCGCAGAGAAGACGCAGGCCTTCGAGCA CGCCTTGCATCAGGCTGACAGTGAGATCCTGTTTCCCTTTCCGCTGCTGGATGAGACAGGCCGGGAAGCGGTCTGCCCGG CAGATTTCTGGCAATGCAACGCATCACTGGCCGAACAGCTGAACACTGACGAGCAGCACTTGCGCGAATACTGCGCCGGG CTGCTACAGGCCATCACTGGAAAAGGCGCACTGATTTACGACCCGGCCTGTTCGACCGGCGCGTTCATCGCCCACCTCGC CCGCGCCCTGCCCGACTGTCTGTGCCTGGGCTGTGACCGTTCGGCCTCGATGATCGAACACGCCAGGCAATGTCACAGCG GGACATCCGTCGAGTTCGATGTGCTGGAGGCGAGTGAAGCTTTCGATGCCGGGATTCGCTGCGATGTCTTGATCCTGCGT TTCCTCAACGCCGAAGTCTTGACCCGTCGTGAGGCCCAAACCGCATTCGAGTCGCTGATCCGCTGCGTCAAGCCCGGCGG CACGATCCTCGTCTTCGGTCACACCCCGGTACTGATTCCGGTCACCTGGCTTGCCTCCATCCACCACCTGAAACTTGAAT CCAGTGTCGCGGCACGGTCGGGGCAGGTCGAGCTGTTCCAGTTCTATCGTCTGACGGTTTCGGCGCCATGA
Upstream 100 bases:
>100_bases TCAACGTGGTGATCCCCGGACTGGAACGCTTCTTCGTGGTCTCCAGCGGTAACGTCGTCGTCCCGCAAGCCCGGGGCCTT ACGCTGGAGAGGCCCGCCTC
Downstream 100 bases:
>100_bases GTTTTTCCCTGCACAGCCGAGGTTATTACCCGACCGGCGACGGCCATCAACTCTATTGGGAACGGCATGGTGTTCCGGGA CACGAACCGGTGTTTTTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MNRPDRNRELTLARSMRLYLNENGAVGHYLEPRGSGLHYIFFLRVNDELWVGRKLLQRDRHFRWQAGSALKPGMLFGPHL HSLWGDDGLSIGYRTASPAEKTQAFEHALHQADSEILFPFPLLDETGREAVCPADFWQCNASLAEQLNTDEQHLREYCAG LLQAITGKGALIYDPACSTGAFIAHLARALPDCLCLGCDRSASMIEHARQCHSGTSVEFDVLEASEAFDAGIRCDVLILR FLNAEVLTRREAQTAFESLIRCVKPGGTILVFGHTPVLIPVTWLASIHHLKLESSVAARSGQVELFQFYRLTVSAP
Sequences:
>Translated_316_residues MNRPDRNRELTLARSMRLYLNENGAVGHYLEPRGSGLHYIFFLRVNDELWVGRKLLQRDRHFRWQAGSALKPGMLFGPHL HSLWGDDGLSIGYRTASPAEKTQAFEHALHQADSEILFPFPLLDETGREAVCPADFWQCNASLAEQLNTDEQHLREYCAG LLQAITGKGALIYDPACSTGAFIAHLARALPDCLCLGCDRSASMIEHARQCHSGTSVEFDVLEASEAFDAGIRCDVLILR FLNAEVLTRREAQTAFESLIRCVKPGGTILVFGHTPVLIPVTWLASIHHLKLESSVAARSGQVELFQFYRLTVSAP >Mature_316_residues MNRPDRNRELTLARSMRLYLNENGAVGHYLEPRGSGLHYIFFLRVNDELWVGRKLLQRDRHFRWQAGSALKPGMLFGPHL HSLWGDDGLSIGYRTASPAEKTQAFEHALHQADSEILFPFPLLDETGREAVCPADFWQCNASLAEQLNTDEQHLREYCAG LLQAITGKGALIYDPACSTGAFIAHLARALPDCLCLGCDRSASMIEHARQCHSGTSVEFDVLEASEAFDAGIRCDVLILR FLNAEVLTRREAQTAFESLIRCVKPGGTILVFGHTPVLIPVTWLASIHHLKLESSVAARSGQVELFQFYRLTVSAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35214; Mature: 35214
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRPDRNRELTLARSMRLYLNENGAVGHYLEPRGSGLHYIFFLRVNDELWVGRKLLQRDR CCCCCCCCEEHHEEHEEEEECCCCCCCCEECCCCCCEEEEEEEEECCCHHHHHHHHHHHC HFRWQAGSALKPGMLFGPHLHSLWGDDGLSIGYRTASPAEKTQAFEHALHQADSEILFPF CCEECCCCCCCCCCEECCHHHHHCCCCCCEECEECCCCHHHHHHHHHHHHHCCCCEEECC PLLDETGREAVCPADFWQCNASLAEQLNTDEQHLREYCAGLLQAITGKGALIYDPACSTG CCCCCCCCCCCCCHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCHH AFIAHLARALPDCLCLGCDRSASMIEHARQCHSGTSVEFDVLEASEAFDAGIRCDVLILR HHHHHHHHHHHHHEEECCCCCHHHHHHHHHHCCCCCEEEEEEECHHHHCCCCHHHHHHHH FLNAEVLTRREAQTAFESLIRCVKPGGTILVFGHTPVLIPVTWLASIHHLKLESSVAARS HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHCC GQVELFQFYRLTVSAP CCEEEEEEEEEEECCC >Mature Secondary Structure MNRPDRNRELTLARSMRLYLNENGAVGHYLEPRGSGLHYIFFLRVNDELWVGRKLLQRDR CCCCCCCCEEHHEEHEEEEECCCCCCCCEECCCCCCEEEEEEEEECCCHHHHHHHHHHHC HFRWQAGSALKPGMLFGPHLHSLWGDDGLSIGYRTASPAEKTQAFEHALHQADSEILFPF CCEECCCCCCCCCCEECCHHHHHCCCCCCEECEECCCCHHHHHHHHHHHHHCCCCEEECC PLLDETGREAVCPADFWQCNASLAEQLNTDEQHLREYCAGLLQAITGKGALIYDPACSTG CCCCCCCCCCCCCHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCHH AFIAHLARALPDCLCLGCDRSASMIEHARQCHSGTSVEFDVLEASEAFDAGIRCDVLILR HHHHHHHHHHHHHEEECCCCCHHHHHHHHHHCCCCCEEEEEEECHHHHCCCCHHHHHHHH FLNAEVLTRREAQTAFESLIRCVKPGGTILVFGHTPVLIPVTWLASIHHLKLESSVAARS HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHCC GQVELFQFYRLTVSAP CCEEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA