Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77459823

Identifier: 77459823

GI number: 77459823

Start: 4069866

End: 4070618

Strand: Direct

Name: 77459823

Synonym: Pfl01_3601

Alternate gene names: NA

Gene position: 4069866-4070618 (Clockwise)

Preceding gene: 77459822

Following gene: 77459824

Centisome position: 63.21

GC content: 60.56

Gene sequence:

>753_bases
ATGTCCCTACGCACCCTGCTCACCACCCTGCTGCTCGGCTGCAGTTTTTCGGTGATGGCAGCCACAGAAATCGTGCCCCT
CAAGTACCACACCAGTGCCGACATGCTGCCGGTGGCTCAGGACTTCATCGGCAAGGACGGCCAGGTCAGCGCCTATGGCA
ACCAACTGATCGTCAAGGCCGAGCCCGGCAAGATTCAAGAACTCAAGGACCTGCTCTCGCAACTCGACACCGCGCCCAAG
CGCCTGCTGATCACAGTCGACACCAACGAAAACAACGGTCGTGGCGATGAAGGCTATTCGGTGAACGGCGCGCAAACCCG
CATCATCAGTCGAAGCACTGCCAGCCGTGACGGCGGCATTCAGCAGATCCAGGCCAGCGAAGGTGCTCCGGCACTGATCC
AGGTCGGCCAGAGCGTGCCGATCACCAGCAGCCAGACCAACTCCTACGGCGATTACAGCAGCCAGACGCAATATCGCAAC
GTCACCCAGGGTTTTTACGTCACCGCCAGCGTCACCGGCGAAACCGTTCACCTGGCAATCAGTACCAACCGTGACCGCAT
GAGCCAGGAACGTCCCGATGTAGTGAACGTACAAAGTACCGACACAACCGTCACCGGACGCTTGGGCGAGTGGATCACCC
TCGCCGGCGTGAATCGCCAGACCCAGGCCGACAAACAGGGCCTGGCCCGCAGCTACTCGACTCAGGGCCGGGATGACATG
ACGTTGCGGGTGAAAGTCGACACGCTGGACTAA

Upstream 100 bases:

>100_bases
CTCACGATGCCGGGGCGTTTTGCTGTCTACGATTCAACTTGCCCCACCCCGGGCCGACAAACTGGCAATATCAAGCCTTT
CGAAAGCGGAGATAACGGAC

Downstream 100 bases:

>100_bases
AGCACCGAAAACTGACTGATTAGTCGTATTAGACGAAAGATGTAGTGCTTGAAAAAAAGCACTACAAAACGTTTGACGAG
CCAAAAAAGCGAAGGCATGA

Product: NolW-like protein

Products: NA

Alternate protein names: Type II And III Secretion System Family Protein; NolW-Like; NolW Domain-Containing Protein; Secretion System Protein; NolW-Like Protein; Bacterial Type II/III Secretion System Short Domain Protein; Type II And III Secretion System Protein

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MSLRTLLTTLLLGCSFSVMAATEIVPLKYHTSADMLPVAQDFIGKDGQVSAYGNQLIVKAEPGKIQELKDLLSQLDTAPK
RLLITVDTNENNGRGDEGYSVNGAQTRIISRSTASRDGGIQQIQASEGAPALIQVGQSVPITSSQTNSYGDYSSQTQYRN
VTQGFYVTASVTGETVHLAISTNRDRMSQERPDVVNVQSTDTTVTGRLGEWITLAGVNRQTQADKQGLARSYSTQGRDDM
TLRVKVDTLD

Sequences:

>Translated_250_residues
MSLRTLLTTLLLGCSFSVMAATEIVPLKYHTSADMLPVAQDFIGKDGQVSAYGNQLIVKAEPGKIQELKDLLSQLDTAPK
RLLITVDTNENNGRGDEGYSVNGAQTRIISRSTASRDGGIQQIQASEGAPALIQVGQSVPITSSQTNSYGDYSSQTQYRN
VTQGFYVTASVTGETVHLAISTNRDRMSQERPDVVNVQSTDTTVTGRLGEWITLAGVNRQTQADKQGLARSYSTQGRDDM
TLRVKVDTLD
>Mature_249_residues
SLRTLLTTLLLGCSFSVMAATEIVPLKYHTSADMLPVAQDFIGKDGQVSAYGNQLIVKAEPGKIQELKDLLSQLDTAPKR
LLITVDTNENNGRGDEGYSVNGAQTRIISRSTASRDGGIQQIQASEGAPALIQVGQSVPITSSQTNSYGDYSSQTQYRNV
TQGFYVTASVTGETVHLAISTNRDRMSQERPDVVNVQSTDTTVTGRLGEWITLAGVNRQTQADKQGLARSYSTQGRDDMT
LRVKVDTLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27066; Mature: 26934

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRTLLTTLLLGCSFSVMAATEIVPLKYHTSADMLPVAQDFIGKDGQVSAYGNQLIVKA
CCHHHHHHHHHHHCCCEEEEHEEEEEEEECCCCCCCHHHHHHCCCCCEEEECCCEEEEEE
EPGKIQELKDLLSQLDTAPKRLLITVDTNENNGRGDEGYSVNGAQTRIISRSTASRDGGI
CCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEECCHHEEEEECCCCCCCCCC
QQIQASEGAPALIQVGQSVPITSSQTNSYGDYSSQTQYRNVTQGFYVTASVTGETVHLAI
EEEECCCCCCHHEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEEECCCEEEEEE
STNRDRMSQERPDVVNVQSTDTTVTGRLGEWITLAGVNRQTQADKQGLARSYSTQGRDDM
ECCHHHHHHCCCCEEEEECCCCEEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCE
TLRVKVDTLD
EEEEEEEECC
>Mature Secondary Structure 
SLRTLLTTLLLGCSFSVMAATEIVPLKYHTSADMLPVAQDFIGKDGQVSAYGNQLIVKA
CHHHHHHHHHHHCCCEEEEHEEEEEEEECCCCCCCHHHHHHCCCCCEEEECCCEEEEEE
EPGKIQELKDLLSQLDTAPKRLLITVDTNENNGRGDEGYSVNGAQTRIISRSTASRDGGI
CCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEECCHHEEEEECCCCCCCCCC
QQIQASEGAPALIQVGQSVPITSSQTNSYGDYSSQTQYRNVTQGFYVTASVTGETVHLAI
EEEECCCCCCHHEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEEECCCEEEEEE
STNRDRMSQERPDVVNVQSTDTTVTGRLGEWITLAGVNRQTQADKQGLARSYSTQGRDDM
ECCHHHHHHCCCCEEEEECCCCEEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCE
TLRVKVDTLD
EEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA