| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is hflD [H]
Identifier: 77459819
GI number: 77459819
Start: 4065932
End: 4066555
Strand: Direct
Name: hflD [H]
Synonym: Pfl01_3597
Alternate gene names: 77459819
Gene position: 4065932-4066555 (Clockwise)
Preceding gene: 77459818
Following gene: 77459820
Centisome position: 63.15
GC content: 64.9
Gene sequence:
>624_bases ATGAGCCCGACTCAGGAGCAATTGACCGCTCTGGGCGGCGTGTTTCTCGCCGCCGTGCTGGTCGACCGGATCGCCAAGAC CGGTCAGACCAACGAGGCCGGCCTGAGCTGCATGCTCGGCAGCCTGCTGGTTCGCGACCCGAAAGACACCCTGGATGTTT ACGGCGGCGACGATATCAACCTGCGCGAGGGTTACCGCGCGCTGATCGGCGCCCTCGAGCGCGACCCGAGCACTCTGCAG CGCGAACCGCTGCGTTACGCCCTGTCGATGCTTGGTCTTGAGCGACAACTGGCCAAGCGCGACGACATGCTCGACGTGAT CGGCAAACGCCTGCCGCAGATCCAGTCGCAGGTCGAGCACTTCGGCCCGGCCCACGAAAACGTGATCGCGGCCTGCGGTG CGCTGTATCAGGACACCCTGAGCACGCTGCGCCAACGCATTCAGGTGCATGGCGACATGCGCAATCTGCAGCAGCCGAGC AATGCCTCGAAGATCCGCGCCCTGCTGCTCGCCGGCATTCGTTCGGCCCGCCTGTGGCGCCAGCTCGGCGGTCACCGCTG GCAACTGGTCGTCAGCCGGCGCAAATTGCTCAAAGAGCTGTATCCGTTGATGCGCAGCGAGTAA
Upstream 100 bases:
>100_bases AACGCGCGGTCACGCCGGGCCAGTCGGTGGTGTTCTATGACGGTGAAATCTGCCTCGGTGGCGGCGTGATCGAAGTCGCC GAGCCTTGGAGCGGCCAGGC
Downstream 100 bases:
>100_bases ATCACCGCGCAACAAAAGCTTTGTAGTCTGTAACGCGTAATACGCCGGTCAGTTGGCGACGGACCGGCGGATTTTTTCAT GTATGATACGCGCCCCATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MSPTQEQLTALGGVFLAAVLVDRIAKTGQTNEAGLSCMLGSLLVRDPKDTLDVYGGDDINLREGYRALIGALERDPSTLQ REPLRYALSMLGLERQLAKRDDMLDVIGKRLPQIQSQVEHFGPAHENVIAACGALYQDTLSTLRQRIQVHGDMRNLQQPS NASKIRALLLAGIRSARLWRQLGGHRWQLVVSRRKLLKELYPLMRSE
Sequences:
>Translated_207_residues MSPTQEQLTALGGVFLAAVLVDRIAKTGQTNEAGLSCMLGSLLVRDPKDTLDVYGGDDINLREGYRALIGALERDPSTLQ REPLRYALSMLGLERQLAKRDDMLDVIGKRLPQIQSQVEHFGPAHENVIAACGALYQDTLSTLRQRIQVHGDMRNLQQPS NASKIRALLLAGIRSARLWRQLGGHRWQLVVSRRKLLKELYPLMRSE >Mature_206_residues SPTQEQLTALGGVFLAAVLVDRIAKTGQTNEAGLSCMLGSLLVRDPKDTLDVYGGDDINLREGYRALIGALERDPSTLQR EPLRYALSMLGLERQLAKRDDMLDVIGKRLPQIQSQVEHFGPAHENVIAACGALYQDTLSTLRQRIQVHGDMRNLQQPSN ASKIRALLLAGIRSARLWRQLGGHRWQLVVSRRKLLKELYPLMRSE
Specific function: Unknown
COG id: COG2915
COG function: function code R; Uncharacterized protein involved in purine metabolism
Gene ontology:
Cell location: Cytoplasm. Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hflD family [H]
Homologues:
Organism=Escherichia coli, GI1787377, Length=191, Percent_Identity=41.3612565445026, Blast_Score=137, Evalue=4e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007451 - ProDom: PD037115 [H]
Pfam domain/function: PF04356 DUF489 [H]
EC number: NA
Molecular weight: Translated: 23150; Mature: 23019
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPTQEQLTALGGVFLAAVLVDRIAKTGQTNEAGLSCMLGSLLVRDPKDTLDVYGGDDIN CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCC LREGYRALIGALERDPSTLQREPLRYALSMLGLERQLAKRDDMLDVIGKRLPQIQSQVEH HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGPAHENVIAACGALYQDTLSTLRQRIQVHGDMRNLQQPSNASKIRALLLAGIRSARLWR HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH QLGGHRWQLVVSRRKLLKELYPLMRSE HHCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SPTQEQLTALGGVFLAAVLVDRIAKTGQTNEAGLSCMLGSLLVRDPKDTLDVYGGDDIN CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCC LREGYRALIGALERDPSTLQREPLRYALSMLGLERQLAKRDDMLDVIGKRLPQIQSQVEH HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGPAHENVIAACGALYQDTLSTLRQRIQVHGDMRNLQQPSNASKIRALLLAGIRSARLWR HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH QLGGHRWQLVVSRRKLLKELYPLMRSE HHCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA