| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is ate [H]
Identifier: 77459810
GI number: 77459810
Start: 4055179
End: 4055886
Strand: Direct
Name: ate [H]
Synonym: Pfl01_3588
Alternate gene names: 77459810
Gene position: 4055179-4055886 (Clockwise)
Preceding gene: 77459809
Following gene: 77459811
Centisome position: 62.98
GC content: 58.47
Gene sequence:
>708_bases ATGACCGAGTTGGCGCGGTTGAAGTTTTATGCCACTCAGCCTCACTCTTGCAGTTATCTGCCCGAGGAACAGGCGACGAC CCTGTTTCTCGATCCGAGCCAGCCCATGGATGTGCATGTCTACGCAGACCTGTCAGAAATGGGCTTTCGTCGCAGCGGCG ATCACCTGTACCGCCCGCATTGCCAGAACTGCAATGCCTGCGTGCCTGCGCGCATTCCGGTGGCGCAGTTCAACCCCAAC CGGCAGCAGAAACGCATTTTCAAGCGCAACGTCGATTTGCAGGTGCGCCCGGTCAAGCCGGCGTTCAGCGAAGAGTACTT CGACCTCTATCAGCGCTACATCGAACAGCGCCACGCCGACGGCGACATGTACCCGCCGAGCCGCGATCAATTCTCGACTT TTCTGGTACGCGACCTGCCCTTCTCACGCTTTTACGAGTTCCGGCTCGACGGACGGTTGCTCGCAGTTGCCGTGACCGAT CTGCTGCCCAACGGCCTGTCGGCGGTCTACACCTTTTACGAACCGCAGGAAGAACGCCGCAGCCTCGGACGCTACGCGAT CCTCTGGCAAATCGCCGAAGCCCAGCGGCTGGGGCTTGAGGCGGTGTACCTGGGTTACTGGATCAAAAACTGCAAAAAGA TGAACTACAAGACCCAATATCGGCCTATCGAACTGCTGATCAATCAGCGCTGGGTCGTCCTGAACTGA
Upstream 100 bases:
>100_bases CGACACCTCGATCAACCCAATCATGCGACCTGGGTTTGCTGAGCGACTTTTGCGCGCGTGGCTTACACTTAATTCACCAG CTTACCCTTGAGGGTTGATC
Downstream 100 bases:
>100_bases ATGCAAACCCTAAACCCCTTGGCGTAAACCCCATTTTTCGGGCACAATGCACGCCGCTTTTGCCTGGCGCAGTTGCACCG GGCCATTCATTGGATACCGA
Product: arginyl-tRNA-protein transferase
Products: NA
Alternate protein names: Arginyltransferase; R-transferase [H]
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MTELARLKFYATQPHSCSYLPEEQATTLFLDPSQPMDVHVYADLSEMGFRRSGDHLYRPHCQNCNACVPARIPVAQFNPN RQQKRIFKRNVDLQVRPVKPAFSEEYFDLYQRYIEQRHADGDMYPPSRDQFSTFLVRDLPFSRFYEFRLDGRLLAVAVTD LLPNGLSAVYTFYEPQEERRSLGRYAILWQIAEAQRLGLEAVYLGYWIKNCKKMNYKTQYRPIELLINQRWVVLN
Sequences:
>Translated_235_residues MTELARLKFYATQPHSCSYLPEEQATTLFLDPSQPMDVHVYADLSEMGFRRSGDHLYRPHCQNCNACVPARIPVAQFNPN RQQKRIFKRNVDLQVRPVKPAFSEEYFDLYQRYIEQRHADGDMYPPSRDQFSTFLVRDLPFSRFYEFRLDGRLLAVAVTD LLPNGLSAVYTFYEPQEERRSLGRYAILWQIAEAQRLGLEAVYLGYWIKNCKKMNYKTQYRPIELLINQRWVVLN >Mature_234_residues TELARLKFYATQPHSCSYLPEEQATTLFLDPSQPMDVHVYADLSEMGFRRSGDHLYRPHCQNCNACVPARIPVAQFNPNR QQKRIFKRNVDLQVRPVKPAFSEEYFDLYQRYIEQRHADGDMYPPSRDQFSTFLVRDLPFSRFYEFRLDGRLLAVAVTDL LPNGLSAVYTFYEPQEERRSLGRYAILWQIAEAQRLGLEAVYLGYWIKNCKKMNYKTQYRPIELLINQRWVVLN
Specific function: May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate (Potential) [H]
COG id: COG2935
COG function: function code O; Putative arginyl-tRNA:protein arginylyltransferase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the R-transferase family [H]
Homologues:
Organism=Homo sapiens, GI50345877, Length=149, Percent_Identity=34.8993288590604, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI50345875, Length=145, Percent_Identity=35.1724137931034, Blast_Score=79, Evalue=5e-15, Organism=Caenorhabditis elegans, GI32563963, Length=149, Percent_Identity=37.5838926174497, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI32563965, Length=149, Percent_Identity=37.5838926174497, Blast_Score=83, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6321421, Length=247, Percent_Identity=28.7449392712551, Blast_Score=90, Evalue=3e-19, Organism=Drosophila melanogaster, GI45549106, Length=143, Percent_Identity=31.4685314685315, Blast_Score=64, Evalue=7e-11, Organism=Drosophila melanogaster, GI45551129, Length=100, Percent_Identity=36, Blast_Score=64, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR007472 - InterPro: IPR017138 - InterPro: IPR007471 [H]
Pfam domain/function: PF04377 ATE_C; PF04376 ATE_N [H]
EC number: =2.3.2.8 [H]
Molecular weight: Translated: 27836; Mature: 27705
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELARLKFYATQPHSCSYLPEEQATTLFLDPSQPMDVHVYADLSEMGFRRSGDHLYRPH CCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCEEEEEECHHHCCCCCCCCCCCCCC CQNCNACVPARIPVAQFNPNRQQKRIFKRNVDLQVRPVKPAFSEEYFDLYQRYIEQRHAD CCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHCCC GDMYPPSRDQFSTFLVRDLPFSRFYEFRLDGRLLAVAVTDLLPNGLSAVYTFYEPQEERR CCCCCCCHHHHHHHHHHCCCHHHHHEEEECCEEEEEEHHHHCCCCHHHEEEEECCHHHHH SLGRYAILWQIAEAQRLGLEAVYLGYWIKNCKKMNYKTQYRPIELLINQRWVVLN HCCCEEEEEEEHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEEC >Mature Secondary Structure TELARLKFYATQPHSCSYLPEEQATTLFLDPSQPMDVHVYADLSEMGFRRSGDHLYRPH CCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCEEEEEECHHHCCCCCCCCCCCCCC CQNCNACVPARIPVAQFNPNRQQKRIFKRNVDLQVRPVKPAFSEEYFDLYQRYIEQRHAD CCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHCCC GDMYPPSRDQFSTFLVRDLPFSRFYEFRLDGRLLAVAVTDLLPNGLSAVYTFYEPQEERR CCCCCCCHHHHHHHHHHCCCHHHHHEEEECCEEEEEEHHHHCCCCHHHEEEEECCHHHHH SLGRYAILWQIAEAQRLGLEAVYLGYWIKNCKKMNYKTQYRPIELLINQRWVVLN HCCCEEEEEEEHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA