| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is aat
Identifier: 77459809
GI number: 77459809
Start: 4054440
End: 4055120
Strand: Direct
Name: aat
Synonym: Pfl01_3587
Alternate gene names: 77459809
Gene position: 4054440-4055120 (Clockwise)
Preceding gene: 77459802
Following gene: 77459810
Centisome position: 62.97
GC content: 60.65
Gene sequence:
>681_bases ATGCTGACTTGGTTACAACGCAATTCACTGACTTTCCCGCCACTGGAAAAGGCCATGCGCGATCCCAACGGACTGCTGGC GGCCGGAGGCGACCTGTCCGCCGATCGCTTGATCCAGGCCTATCGCCATGGCTGCTTTCCATGGTTTTCCGAAGGCCAGC CGATTCTCTGGTGGTCGCCGGATCCGCGCACCGTGCTTTTTCCCGACGAACTGCACGTCTCGCGCAGCCTCGGCAAACTG ATGCGTAAACAACGCTATCGAGTGACCTTCGATCAGGATTTCGACGCCGTGATCCGCGCTTGCGCCGCTCCCCGGGAATA CGCCGACGGCACCTGGATCACCGAAGCGATGCAGGACGCCTATATCGAATTGCATCGACGCGGCTTTGCCCATTCGGTGG AAGTCTGGGATGAGGGCGAACTGGTCGGCGGCCTGTACGGCCTGGCGATGGGGCAACTGTTCTTCGGCGAGTCGATGTTC AGCCGCGCGGACAATGCCTCCAAGTACGGCTTTGCCACACTGGTGCAACATCTGAGAGAAGCCGGGTTCGTCCTGATCGA CTGCCAGATGCCAACCGACCACCTGCACAGCCTCGGCGCCCGGGCCATTTCACGGCAGACATTCGCCGACTATCTGGCCC GACACCTCGATCAACCCAATCATGCGACCTGGGTTTGCTGA
Upstream 100 bases:
>100_bases CACACGCAGCACCGCAATGGAGGACATTCGCGTCATTTCCCGGCACACTTTACCGCGGGCCCAGCGCCCACCGCCCTCCC CTTCTGCAAGCCTGGACGCC
Downstream 100 bases:
>100_bases GCGACTTTTGCGCGCGTGGCTTACACTTAATTCACCAGCTTACCCTTGAGGGTTGATCATGACCGAGTTGGCGCGGTTGA AGTTTTATGCCACTCAGCCT
Product: leucyl/phenylalanyl-tRNA--protein transferase
Products: NA
Alternate protein names: L/F-transferase; Leucyltransferase; Phenyalanyltransferase
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MLTWLQRNSLTFPPLEKAMRDPNGLLAAGGDLSADRLIQAYRHGCFPWFSEGQPILWWSPDPRTVLFPDELHVSRSLGKL MRKQRYRVTFDQDFDAVIRACAAPREYADGTWITEAMQDAYIELHRRGFAHSVEVWDEGELVGGLYGLAMGQLFFGESMF SRADNASKYGFATLVQHLREAGFVLIDCQMPTDHLHSLGARAISRQTFADYLARHLDQPNHATWVC
Sequences:
>Translated_226_residues MLTWLQRNSLTFPPLEKAMRDPNGLLAAGGDLSADRLIQAYRHGCFPWFSEGQPILWWSPDPRTVLFPDELHVSRSLGKL MRKQRYRVTFDQDFDAVIRACAAPREYADGTWITEAMQDAYIELHRRGFAHSVEVWDEGELVGGLYGLAMGQLFFGESMF SRADNASKYGFATLVQHLREAGFVLIDCQMPTDHLHSLGARAISRQTFADYLARHLDQPNHATWVC >Mature_226_residues MLTWLQRNSLTFPPLEKAMRDPNGLLAAGGDLSADRLIQAYRHGCFPWFSEGQPILWWSPDPRTVLFPDELHVSRSLGKL MRKQRYRVTFDQDFDAVIRACAAPREYADGTWITEAMQDAYIELHRRGFAHSVEVWDEGELVGGLYGLAMGQLFFGESMF SRADNASKYGFATLVQHLREAGFVLIDCQMPTDHLHSLGARAISRQTFADYLARHLDQPNHATWVC
Specific function: Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
COG id: COG2360
COG function: function code O; Leu/Phe-tRNA-protein transferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the L/F-transferase family
Homologues:
Organism=Escherichia coli, GI1787111, Length=211, Percent_Identity=54.5023696682464, Blast_Score=231, Evalue=2e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LFTR_PSEPF (Q3KA79)
Other databases:
- EMBL: CP000094 - RefSeq: YP_349316.1 - HSSP: P0A8P1 - ProteinModelPortal: Q3KA79 - SMR: Q3KA79 - STRING: Q3KA79 - GeneID: 3714975 - GenomeReviews: CP000094_GR - KEGG: pfo:Pfl01_3587 - eggNOG: COG2360 - HOGENOM: HBG485363 - OMA: GEPILWW - ProtClustDB: PRK00301 - BioCyc: PFLU205922:PFL_3587-MONOMER - GO: GO:0005737 - HAMAP: MF_00688 - InterPro: IPR016181 - InterPro: IPR004616 - TIGRFAMs: TIGR00667
Pfam domain/function: PF03588 Leu_Phe_trans; SSF55729 Acyl_CoA_acyltransferase
EC number: =2.3.2.6
Molecular weight: Translated: 25735; Mature: 25735
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTWLQRNSLTFPPLEKAMRDPNGLLAAGGDLSADRLIQAYRHGCFPWFSEGQPILWWSP CCCEECCCCCCCCCHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEECC DPRTVLFPDELHVSRSLGKLMRKQRYRVTFDQDFDAVIRACAAPREYADGTWITEAMQDA CCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHCCCHHHHHHHHHH YIELHRRGFAHSVEVWDEGELVGGLYGLAMGQLFFGESMFSRADNASKYGFATLVQHLRE HHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH AGFVLIDCQMPTDHLHSLGARAISRQTFADYLARHLDQPNHATWVC CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MLTWLQRNSLTFPPLEKAMRDPNGLLAAGGDLSADRLIQAYRHGCFPWFSEGQPILWWSP CCCEECCCCCCCCCHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEECC DPRTVLFPDELHVSRSLGKLMRKQRYRVTFDQDFDAVIRACAAPREYADGTWITEAMQDA CCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHCCCHHHHHHHHHH YIELHRRGFAHSVEVWDEGELVGGLYGLAMGQLFFGESMFSRADNASKYGFATLVQHLRE HHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH AGFVLIDCQMPTDHLHSLGARAISRQTFADYLARHLDQPNHATWVC CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA