Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77459770

Identifier: 77459770

GI number: 77459770

Start: 4021236

End: 4021637

Strand: Direct

Name: 77459770

Synonym: Pfl01_3548

Alternate gene names: NA

Gene position: 4021236-4021637 (Clockwise)

Preceding gene: 77459769

Following gene: 77459772

Centisome position: 62.46

GC content: 59.45

Gene sequence:

>402_bases
ATGAAACGCCAAATCCTTCTCGGCATCGCTTTCTCGGTTCTTGCAGTCAACGCTTTTGCAGCCAAACCCGCCCACACCAT
GATCGCCGAAGGCGGTTCGGATCGGTTGATTGAAAGTCGTTTGGCTGAGGGTGGTTCGGATCGTCTGATCGAGCGTCGCG
TTGCTGAAGGTGGTTCTGATCGCCTGCAAGAACGTCGCGTTGCTGAAGGTGGCGCTGATCGTCTGCTGGAACGTCGCGTT
GCCGAAGGTGGCTCGGATCGTCTGCAAGAACGCCGCGTTGCTGAAGGTGGCTCGGATCGTCTGCTGGAACGTCGCGTTGC
CGAAGGTGGCTCGGATCGTCTGCAAGAACGCCGTGTGGCTGAAGGTGGTGCTGATCGCCTGCAAGAGCGCCGCGTCGCCT
GA

Upstream 100 bases:

>100_bases
GCGTCGATAGTCACCATCAGCTCAATGAAGTTCTCATAAAAAATTCGCGGCGTAACATCGGCTCCATACCCAACAAACAA
CACCCTTGGAGCACACGATC

Downstream 100 bases:

>100_bases
GTAAAACGCTCTACCGCTGAACAAACAAAAAGCCCGGCCTGATCAGCCGGGCTTTTTCACGTCCAACCGGTGCTTATTGC
ACGGTTTTCAGCTTGACCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MKRQILLGIAFSVLAVNAFAAKPAHTMIAEGGSDRLIESRLAEGGSDRLIERRVAEGGSDRLQERRVAEGGADRLLERRV
AEGGSDRLQERRVAEGGSDRLLERRVAEGGSDRLQERRVAEGGADRLQERRVA

Sequences:

>Translated_133_residues
MKRQILLGIAFSVLAVNAFAAKPAHTMIAEGGSDRLIESRLAEGGSDRLIERRVAEGGSDRLQERRVAEGGADRLLERRV
AEGGSDRLQERRVAEGGSDRLLERRVAEGGSDRLQERRVAEGGADRLQERRVA
>Mature_133_residues
MKRQILLGIAFSVLAVNAFAAKPAHTMIAEGGSDRLIESRLAEGGSDRLIERRVAEGGSDRLQERRVAEGGADRLLERRV
AEGGSDRLQERRVAEGGSDRLLERRVAEGGSDRLQERRVAEGGADRLQERRVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14574; Mature: 14574

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRQILLGIAFSVLAVNAFAAKPAHTMIAEGGSDRLIESRLAEGGSDRLIERRVAEGGSD
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHCCCHH
RLQERRVAEGGADRLLERRVAEGGSDRLQERRVAEGGSDRLLERRVAEGGSDRLQERRVA
HHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHH
EGGADRLQERRVA
CCCHHHHHHHCCC
>Mature Secondary Structure
MKRQILLGIAFSVLAVNAFAAKPAHTMIAEGGSDRLIESRLAEGGSDRLIERRVAEGGSD
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHCCCHH
RLQERRVAEGGADRLLERRVAEGGSDRLQERRVAEGGSDRLLERRVAEGGSDRLQERRVA
HHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHH
EGGADRLQERRVA
CCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA