Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77459755

Identifier: 77459755

GI number: 77459755

Start: 4010937

End: 4012055

Strand: Direct

Name: 77459755

Synonym: Pfl01_3533

Alternate gene names: NA

Gene position: 4010937-4012055 (Clockwise)

Preceding gene: 77459754

Following gene: 77459757

Centisome position: 62.3

GC content: 64.52

Gene sequence:

>1119_bases
ATGAAACCACGTGCCCGCGATCTCCACATCCGCATCGGTCAATTGCAGCCTGGCCCGCTCAACGCCATCACCGACGTACC
CGGCGTAAGGGTCGGCCACAGCAACGTGCGCGGCCGCAGCGCCAGCGGTCGTGACATCTGCAGCGGCGTCACCCTGATCG
AACCACGCGCCGGTTCGACCAACGCACAACCGTGTTTCGCCGGCGTCCACGTCCTCAACGGCAACGGTGACGCCACAGGG
CTGGAGTGGATTCGCGAAGCCGGCCTGCTGACCAGCCCGATCGCCTTCACCAACACTCACAGCCTCGGCGTGGTGCGTGA
TGCCTTGATCGAGCTGGATCGCGCGCAGCAACCGGATGACGGCCGTCTCTACTGGAACATGCCGGTGGTGCTGGAAACCT
TCGATGGGTTGCTCAACGACATCAACGGCTTTCATGTGAAGCCCAAACATGTGGCCGAAGCGATGAGCAATGCCGTTGAC
GGCCCGGTGCAGGAAGGCGCGGTGGGTGGTGGCAGCGGCATGATCTGCCATGAATTCAAAGGTGGGATCGGCACCGCATC
ACGCCGCTTGAGCAAGGCTCAGGGTGGCTGGACAGTGGGCGCCATCGTCCAGGCCAACCACGGGATTCGCAGCGAACTGC
GGGTCGACGGCTACCCGGTCGGGCGATATATGGAACAGGTGGATTCGCCGTTCCTTCGCGCTTCGTTGCCGCATCCGGGC
ATGGGCTCGATCGTCGTGGCCCTCGCCACCGATGCACCGCTGTTGCCGCATCAATGCACGCGACTGGCGCAACGGGCGAG
CCTCGGTCTGGCGCGCACCGGTGGCGGCAATGAGGATCACAGCGGCGACATCTTCATCGCCTTCGCCACCGGTAACGGCC
ATATCCCCCCCGCCGCCTATGAAGGCAAAGGCGCGTCGACCTGCGACGGTTTGCGGATGGTCAACAACGATCACATCAGC
GAGTTGTTCCTGGCGGCGACCGAGGCGGTGGAAGAAGCGATCATCAACGCCTTGCTGACCAGCGAGAGCACCGAAGGCAA
CGGGCATTCGGTGCCGGGGCTGGATGCCGCCACCCTGCTCGCGGCCCTGGATAAAGCCGGGTGGCCGGGTGCTCGCTGA

Upstream 100 bases:

>100_bases
GCCCAAAGCCACCGAACGGGTGCGCACGCGGGTGTGGAGCAAGGTCAAGAACGGCCAGTAACACCCCTTCAAATCACTGC
CTTCAACAGAGAGAACATCA

Downstream 100 bases:

>100_bases
CACTCAGCGGAACAACCCAAGTCCGAGTTCGCGGGCCGCCTGCAACTGCATTGCCGGATCGCTCGACTCGGACTCCAGCA
ACAACGCCGAGCTCGTCACC

Product: peptidase S58, DmpA

Products: NA

Alternate protein names: D-Aminopeptidase; Aminopeptidase DmpA; L-Aminopeptidase/D-Esterase; Aminopeptidase; Peptidase S; T4 Family Peptidase; Peptidase T4 Family; Family; L-Aminopeptidase DmpA; S58 Family Peptidase; D-Amino Peptidase Dmpa Family; Serine Peptidase; L-Aminopeptidase Dmpa; Aminopeptidase DpmA; D-Alanine-D-Alanine Ligase / Aminopeptidase; Peptidase Family; Aminopeptidase-Like Protein; D-Aminopeptidease; D-AMINO PEPTIDASE DmpA Family; L-Aminopeptidase D-Ala-Esterase/Amidase

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MKPRARDLHIRIGQLQPGPLNAITDVPGVRVGHSNVRGRSASGRDICSGVTLIEPRAGSTNAQPCFAGVHVLNGNGDATG
LEWIREAGLLTSPIAFTNTHSLGVVRDALIELDRAQQPDDGRLYWNMPVVLETFDGLLNDINGFHVKPKHVAEAMSNAVD
GPVQEGAVGGGSGMICHEFKGGIGTASRRLSKAQGGWTVGAIVQANHGIRSELRVDGYPVGRYMEQVDSPFLRASLPHPG
MGSIVVALATDAPLLPHQCTRLAQRASLGLARTGGGNEDHSGDIFIAFATGNGHIPPAAYEGKGASTCDGLRMVNNDHIS
ELFLAATEAVEEAIINALLTSESTEGNGHSVPGLDAATLLAALDKAGWPGAR

Sequences:

>Translated_372_residues
MKPRARDLHIRIGQLQPGPLNAITDVPGVRVGHSNVRGRSASGRDICSGVTLIEPRAGSTNAQPCFAGVHVLNGNGDATG
LEWIREAGLLTSPIAFTNTHSLGVVRDALIELDRAQQPDDGRLYWNMPVVLETFDGLLNDINGFHVKPKHVAEAMSNAVD
GPVQEGAVGGGSGMICHEFKGGIGTASRRLSKAQGGWTVGAIVQANHGIRSELRVDGYPVGRYMEQVDSPFLRASLPHPG
MGSIVVALATDAPLLPHQCTRLAQRASLGLARTGGGNEDHSGDIFIAFATGNGHIPPAAYEGKGASTCDGLRMVNNDHIS
ELFLAATEAVEEAIINALLTSESTEGNGHSVPGLDAATLLAALDKAGWPGAR
>Mature_372_residues
MKPRARDLHIRIGQLQPGPLNAITDVPGVRVGHSNVRGRSASGRDICSGVTLIEPRAGSTNAQPCFAGVHVLNGNGDATG
LEWIREAGLLTSPIAFTNTHSLGVVRDALIELDRAQQPDDGRLYWNMPVVLETFDGLLNDINGFHVKPKHVAEAMSNAVD
GPVQEGAVGGGSGMICHEFKGGIGTASRRLSKAQGGWTVGAIVQANHGIRSELRVDGYPVGRYMEQVDSPFLRASLPHPG
MGSIVVALATDAPLLPHQCTRLAQRASLGLARTGGGNEDHSGDIFIAFATGNGHIPPAAYEGKGASTCDGLRMVNNDHIS
ELFLAATEAVEEAIINALLTSESTEGNGHSVPGLDAATLLAALDKAGWPGAR

Specific function: Unknown

COG id: COG3191

COG function: function code EQ; L-aminopeptidase/D-esterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38904; Mature: 38904

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPRARDLHIRIGQLQPGPLNAITDVPGVRVGHSNVRGRSASGRDICSGVTLIEPRAGST
CCCCCCEEEEEECCCCCCCCCHHCCCCCCEECCCCCCCCCCCCCHHHCCCEEECCCCCCC
NAQPCFAGVHVLNGNGDATGLEWIREAGLLTSPIAFTNTHSLGVVRDALIELDRAQQPDD
CCCCEEEEEEEEECCCCCHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCC
GRLYWNMPVVLETFDGLLNDINGFHVKPKHVAEAMSNAVDGPVQEGAVGGGSGMICHEFK
CEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCCEEEEECC
GGIGTASRRLSKAQGGWTVGAIVQANHGIRSELRVDGYPVGRYMEQVDSPFLRASLPHPG
CCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCEEECCCCHHHHHHHHCCCCEECCCCCCC
MGSIVVALATDAPLLPHQCTRLAQRASLGLARTGGGNEDHSGDIFIAFATGNGHIPPAAY
CCCEEEEEECCCCCCHHHHHHHHHHHHCCEEECCCCCCCCCCCEEEEEECCCCCCCCCCC
EGKGASTCDGLRMVNNDHISELFLAATEAVEEAIINALLTSESTEGNGHSVPGLDAATLL
CCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
AALDKAGWPGAR
HHHHHCCCCCCC
>Mature Secondary Structure
MKPRARDLHIRIGQLQPGPLNAITDVPGVRVGHSNVRGRSASGRDICSGVTLIEPRAGST
CCCCCCEEEEEECCCCCCCCCHHCCCCCCEECCCCCCCCCCCCCHHHCCCEEECCCCCCC
NAQPCFAGVHVLNGNGDATGLEWIREAGLLTSPIAFTNTHSLGVVRDALIELDRAQQPDD
CCCCEEEEEEEEECCCCCHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCC
GRLYWNMPVVLETFDGLLNDINGFHVKPKHVAEAMSNAVDGPVQEGAVGGGSGMICHEFK
CEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCCEEEEECC
GGIGTASRRLSKAQGGWTVGAIVQANHGIRSELRVDGYPVGRYMEQVDSPFLRASLPHPG
CCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCEEECCCCHHHHHHHHCCCCEECCCCCCC
MGSIVVALATDAPLLPHQCTRLAQRASLGLARTGGGNEDHSGDIFIAFATGNGHIPPAAY
CCCEEEEEECCCCCCHHHHHHHHHHHHCCEEECCCCCCCCCCCEEEEEECCCCCCCCCCC
EGKGASTCDGLRMVNNDHISELFLAATEAVEEAIINALLTSESTEGNGHSVPGLDAATLL
CCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
AALDKAGWPGAR
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA