| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459755
Identifier: 77459755
GI number: 77459755
Start: 4010937
End: 4012055
Strand: Direct
Name: 77459755
Synonym: Pfl01_3533
Alternate gene names: NA
Gene position: 4010937-4012055 (Clockwise)
Preceding gene: 77459754
Following gene: 77459757
Centisome position: 62.3
GC content: 64.52
Gene sequence:
>1119_bases ATGAAACCACGTGCCCGCGATCTCCACATCCGCATCGGTCAATTGCAGCCTGGCCCGCTCAACGCCATCACCGACGTACC CGGCGTAAGGGTCGGCCACAGCAACGTGCGCGGCCGCAGCGCCAGCGGTCGTGACATCTGCAGCGGCGTCACCCTGATCG AACCACGCGCCGGTTCGACCAACGCACAACCGTGTTTCGCCGGCGTCCACGTCCTCAACGGCAACGGTGACGCCACAGGG CTGGAGTGGATTCGCGAAGCCGGCCTGCTGACCAGCCCGATCGCCTTCACCAACACTCACAGCCTCGGCGTGGTGCGTGA TGCCTTGATCGAGCTGGATCGCGCGCAGCAACCGGATGACGGCCGTCTCTACTGGAACATGCCGGTGGTGCTGGAAACCT TCGATGGGTTGCTCAACGACATCAACGGCTTTCATGTGAAGCCCAAACATGTGGCCGAAGCGATGAGCAATGCCGTTGAC GGCCCGGTGCAGGAAGGCGCGGTGGGTGGTGGCAGCGGCATGATCTGCCATGAATTCAAAGGTGGGATCGGCACCGCATC ACGCCGCTTGAGCAAGGCTCAGGGTGGCTGGACAGTGGGCGCCATCGTCCAGGCCAACCACGGGATTCGCAGCGAACTGC GGGTCGACGGCTACCCGGTCGGGCGATATATGGAACAGGTGGATTCGCCGTTCCTTCGCGCTTCGTTGCCGCATCCGGGC ATGGGCTCGATCGTCGTGGCCCTCGCCACCGATGCACCGCTGTTGCCGCATCAATGCACGCGACTGGCGCAACGGGCGAG CCTCGGTCTGGCGCGCACCGGTGGCGGCAATGAGGATCACAGCGGCGACATCTTCATCGCCTTCGCCACCGGTAACGGCC ATATCCCCCCCGCCGCCTATGAAGGCAAAGGCGCGTCGACCTGCGACGGTTTGCGGATGGTCAACAACGATCACATCAGC GAGTTGTTCCTGGCGGCGACCGAGGCGGTGGAAGAAGCGATCATCAACGCCTTGCTGACCAGCGAGAGCACCGAAGGCAA CGGGCATTCGGTGCCGGGGCTGGATGCCGCCACCCTGCTCGCGGCCCTGGATAAAGCCGGGTGGCCGGGTGCTCGCTGA
Upstream 100 bases:
>100_bases GCCCAAAGCCACCGAACGGGTGCGCACGCGGGTGTGGAGCAAGGTCAAGAACGGCCAGTAACACCCCTTCAAATCACTGC CTTCAACAGAGAGAACATCA
Downstream 100 bases:
>100_bases CACTCAGCGGAACAACCCAAGTCCGAGTTCGCGGGCCGCCTGCAACTGCATTGCCGGATCGCTCGACTCGGACTCCAGCA ACAACGCCGAGCTCGTCACC
Product: peptidase S58, DmpA
Products: NA
Alternate protein names: D-Aminopeptidase; Aminopeptidase DmpA; L-Aminopeptidase/D-Esterase; Aminopeptidase; Peptidase S; T4 Family Peptidase; Peptidase T4 Family; Family; L-Aminopeptidase DmpA; S58 Family Peptidase; D-Amino Peptidase Dmpa Family; Serine Peptidase; L-Aminopeptidase Dmpa; Aminopeptidase DpmA; D-Alanine-D-Alanine Ligase / Aminopeptidase; Peptidase Family; Aminopeptidase-Like Protein; D-Aminopeptidease; D-AMINO PEPTIDASE DmpA Family; L-Aminopeptidase D-Ala-Esterase/Amidase
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MKPRARDLHIRIGQLQPGPLNAITDVPGVRVGHSNVRGRSASGRDICSGVTLIEPRAGSTNAQPCFAGVHVLNGNGDATG LEWIREAGLLTSPIAFTNTHSLGVVRDALIELDRAQQPDDGRLYWNMPVVLETFDGLLNDINGFHVKPKHVAEAMSNAVD GPVQEGAVGGGSGMICHEFKGGIGTASRRLSKAQGGWTVGAIVQANHGIRSELRVDGYPVGRYMEQVDSPFLRASLPHPG MGSIVVALATDAPLLPHQCTRLAQRASLGLARTGGGNEDHSGDIFIAFATGNGHIPPAAYEGKGASTCDGLRMVNNDHIS ELFLAATEAVEEAIINALLTSESTEGNGHSVPGLDAATLLAALDKAGWPGAR
Sequences:
>Translated_372_residues MKPRARDLHIRIGQLQPGPLNAITDVPGVRVGHSNVRGRSASGRDICSGVTLIEPRAGSTNAQPCFAGVHVLNGNGDATG LEWIREAGLLTSPIAFTNTHSLGVVRDALIELDRAQQPDDGRLYWNMPVVLETFDGLLNDINGFHVKPKHVAEAMSNAVD GPVQEGAVGGGSGMICHEFKGGIGTASRRLSKAQGGWTVGAIVQANHGIRSELRVDGYPVGRYMEQVDSPFLRASLPHPG MGSIVVALATDAPLLPHQCTRLAQRASLGLARTGGGNEDHSGDIFIAFATGNGHIPPAAYEGKGASTCDGLRMVNNDHIS ELFLAATEAVEEAIINALLTSESTEGNGHSVPGLDAATLLAALDKAGWPGAR >Mature_372_residues MKPRARDLHIRIGQLQPGPLNAITDVPGVRVGHSNVRGRSASGRDICSGVTLIEPRAGSTNAQPCFAGVHVLNGNGDATG LEWIREAGLLTSPIAFTNTHSLGVVRDALIELDRAQQPDDGRLYWNMPVVLETFDGLLNDINGFHVKPKHVAEAMSNAVD GPVQEGAVGGGSGMICHEFKGGIGTASRRLSKAQGGWTVGAIVQANHGIRSELRVDGYPVGRYMEQVDSPFLRASLPHPG MGSIVVALATDAPLLPHQCTRLAQRASLGLARTGGGNEDHSGDIFIAFATGNGHIPPAAYEGKGASTCDGLRMVNNDHIS ELFLAATEAVEEAIINALLTSESTEGNGHSVPGLDAATLLAALDKAGWPGAR
Specific function: Unknown
COG id: COG3191
COG function: function code EQ; L-aminopeptidase/D-esterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38904; Mature: 38904
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPRARDLHIRIGQLQPGPLNAITDVPGVRVGHSNVRGRSASGRDICSGVTLIEPRAGST CCCCCCEEEEEECCCCCCCCCHHCCCCCCEECCCCCCCCCCCCCHHHCCCEEECCCCCCC NAQPCFAGVHVLNGNGDATGLEWIREAGLLTSPIAFTNTHSLGVVRDALIELDRAQQPDD CCCCEEEEEEEEECCCCCHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCC GRLYWNMPVVLETFDGLLNDINGFHVKPKHVAEAMSNAVDGPVQEGAVGGGSGMICHEFK CEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCCEEEEECC GGIGTASRRLSKAQGGWTVGAIVQANHGIRSELRVDGYPVGRYMEQVDSPFLRASLPHPG CCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCEEECCCCHHHHHHHHCCCCEECCCCCCC MGSIVVALATDAPLLPHQCTRLAQRASLGLARTGGGNEDHSGDIFIAFATGNGHIPPAAY CCCEEEEEECCCCCCHHHHHHHHHHHHCCEEECCCCCCCCCCCEEEEEECCCCCCCCCCC EGKGASTCDGLRMVNNDHISELFLAATEAVEEAIINALLTSESTEGNGHSVPGLDAATLL CCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH AALDKAGWPGAR HHHHHCCCCCCC >Mature Secondary Structure MKPRARDLHIRIGQLQPGPLNAITDVPGVRVGHSNVRGRSASGRDICSGVTLIEPRAGST CCCCCCEEEEEECCCCCCCCCHHCCCCCCEECCCCCCCCCCCCCHHHCCCEEECCCCCCC NAQPCFAGVHVLNGNGDATGLEWIREAGLLTSPIAFTNTHSLGVVRDALIELDRAQQPDD CCCCEEEEEEEEECCCCCHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCC GRLYWNMPVVLETFDGLLNDINGFHVKPKHVAEAMSNAVDGPVQEGAVGGGSGMICHEFK CEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCCEEEEECC GGIGTASRRLSKAQGGWTVGAIVQANHGIRSELRVDGYPVGRYMEQVDSPFLRASLPHPG CCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCEEECCCCHHHHHHHHCCCCEECCCCCCC MGSIVVALATDAPLLPHQCTRLAQRASLGLARTGGGNEDHSGDIFIAFATGNGHIPPAAY CCCEEEEEECCCCCCHHHHHHHHHHHHCCEEECCCCCCCCCCCEEEEEECCCCCCCCCCC EGKGASTCDGLRMVNNDHISELFLAATEAVEEAIINALLTSESTEGNGHSVPGLDAATLL CCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH AALDKAGWPGAR HHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA