| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is kefB [H]
Identifier: 77459735
GI number: 77459735
Start: 3991840
End: 3993648
Strand: Direct
Name: kefB [H]
Synonym: Pfl01_3513
Alternate gene names: 77459735
Gene position: 3991840-3993648 (Clockwise)
Preceding gene: 77459733
Following gene: 77459741
Centisome position: 62.0
GC content: 61.91
Gene sequence:
>1809_bases ATGCCCCATGAAGGCAATCTGTTGCAAGCCGCCGTCGTCTTTCTCCTGGCCGCCGTGCTCACCGTTCCCCTGGCCAAGCG TCTGCAACTGGGCGCGGTGCTCGGTTATCTGTTTGCCGGGGTGATCATCGGCCCGTCGGTACTGGGTCTGATCGGCAATC CGCAAAGTGTCAGCCATATCTCGGAACTGGGCGTGGTGCTGCTGTTGTTCATCATCGGTCTTGAGCTGTCGCCGCGACGT TTGTGGGTGATGCGCAAATCGGTGTTCGGCGTGGGTCTGGCGCAGGTGCTGCTGACCGGTTCGGTGATCGGTGTGCTGGC GTTGTCGGTGTTCGGCCAGCCGCTGAACAGCGCGATTGTTCTGGGCCTGGGCCTGGCGCTGTCGTCCACCGCATTCGGCC TGCAAAGCCTCGCCGAGCGCAAGGAACTGACCAGCCCCCACGGGCGGTTGGCGTTTGCGATTCTGCTGTTCCAGGACATC GCCGCGATCCCGTTGATCGCCCTGGTGCCGATGCTCGCGGGGGTCGATCACCACACCAGCACCGCCGACGATATTCGTCA CAGTTTGCAGGTGCTCGGCAGTATCGCCGTGGTGGTGATCGGCGGGCGATATCTGTTGCGTCCGGTGTTTCGCGTGGTGG CGAAAACCGGTCTGCCGGAAGTCTCCACCGCCACCGCGTTGCTGGTGGTGATCGGTACAGCGTGGCTGATGGACATGGTC GGTGTGTCGATGGCGCTGGGCGCGTTTCTCGCCGGGTTGCTGTTGGCGGATTCGGAATACCGCCATGAGCTGGAAGCGCA GATCGAACCGTTCAAGGGTCTGCTTCTCGGGCTGTTTTTCATCAGCGTCGGCATGGGCGCCAACCTCAGTCTGCTGCTCA GCGCGCCAATCACGGTGCTGGGGCTGACGCTGTTGCTGATCGCCCTGAAGTTGCCGTTGTTGTTTGTAGTCGGGCGTCTG GCCGGTGGATTGAACAAGGTCAGCGCGATTCGCCTCGGCATCGTGCTGGCAGCGGGCGGTGAGTTTGCTTTCGTAGTGTT CAAGATTGGCCGCGATCAAGGCCTGTTTGAACCACGTCTGTACGACCTGCTGGTGCTGACCATCACCCTGTCGATGGCCG TCACGCCGCTGTTGCTGCTGGTCTGCGCACGGCTGGTCAGCCCGAAGGTGCAGCCGGTGGAAGTGCCGGAGAAATTCCGC CAGATCGAGACCGAATCCCCACGGGTAGTGATCGCCGGCATGGGCCGTATGGGGCAGATCGTGGCGCGGATCCTGCGGGC GCAGAACATCAAGTTCGTGGCGCTGGACACCTCGGTGGAAACCATCGAACTGTCGCGCAGTTTTGGTGGCGTACCGGTGT TCTACGGTGACCCGATGCGTCCGGAAATCCTCAGTGCGGCCAAGGTCGGTGAAGCGGAGTACTTCGTGATTGCCACGGAT GATCCGGAAACCAACATCAAGACCGCTGAGATCGTGCGCAAGCTCTATCCAGACATGAAGATCATCGCCCGGGCGCGTAA CCGGCAGCATGTGCATCGGCTGGTGGATGTGGGGGCCGATCCGATCCGGGAGACCTATTACTCAAGCCTGGAAATGAGCC GCCGCACCCTGGTTGGCCTTGGCTTGACCCAGGCCCAGGCCGATGCGCGGATCAAGCGCTTCAAGCACCATGACGAACAG GTGCTGGAAGCTCAACACGCGGTGTACGACGACGCGGCCAAAGTGCTGCAGACCGCCCAGGAAGCGCGGGCGGAACTGGC CCGGTTGTTCGAGTCGGACCAACTGGAAGAACAATCAGGCAAGTCCTGA
Upstream 100 bases:
>100_bases AGAAGCACATCTGCTCAAGCAGGCTGTGCGGTAGATCTGCAATGATTTCAGCCTTTATCCTTGTCGCCCCCCGCCGTACC GCGTTACTGGAGTTCCGCTC
Downstream 100 bases:
>100_bases GCCCCGCCATCAATCCTTCCCGCGCAATGCGCGGGAAGGTTCTGATCAGGCCATCTCCAGCGCCCGCTCCTCCTTCAGGG GCGCCTCTGCAAACCGGTCC
Product: potassium efflux system protein
Products: Proton [Cytoplasm]; K (I) [Periplasm] [C]
Alternate protein names: K(+)/H(+) antiporter; NEM-activatable K(+)/H(+) antiporter [H]
Number of amino acids: Translated: 602; Mature: 601
Protein sequence:
>602_residues MPHEGNLLQAAVVFLLAAVLTVPLAKRLQLGAVLGYLFAGVIIGPSVLGLIGNPQSVSHISELGVVLLLFIIGLELSPRR LWVMRKSVFGVGLAQVLLTGSVIGVLALSVFGQPLNSAIVLGLGLALSSTAFGLQSLAERKELTSPHGRLAFAILLFQDI AAIPLIALVPMLAGVDHHTSTADDIRHSLQVLGSIAVVVIGGRYLLRPVFRVVAKTGLPEVSTATALLVVIGTAWLMDMV GVSMALGAFLAGLLLADSEYRHELEAQIEPFKGLLLGLFFISVGMGANLSLLLSAPITVLGLTLLLIALKLPLLFVVGRL AGGLNKVSAIRLGIVLAAGGEFAFVVFKIGRDQGLFEPRLYDLLVLTITLSMAVTPLLLLVCARLVSPKVQPVEVPEKFR QIETESPRVVIAGMGRMGQIVARILRAQNIKFVALDTSVETIELSRSFGGVPVFYGDPMRPEILSAAKVGEAEYFVIATD DPETNIKTAEIVRKLYPDMKIIARARNRQHVHRLVDVGADPIRETYYSSLEMSRRTLVGLGLTQAQADARIKRFKHHDEQ VLEAQHAVYDDAAKVLQTAQEARAELARLFESDQLEEQSGKS
Sequences:
>Translated_602_residues MPHEGNLLQAAVVFLLAAVLTVPLAKRLQLGAVLGYLFAGVIIGPSVLGLIGNPQSVSHISELGVVLLLFIIGLELSPRR LWVMRKSVFGVGLAQVLLTGSVIGVLALSVFGQPLNSAIVLGLGLALSSTAFGLQSLAERKELTSPHGRLAFAILLFQDI AAIPLIALVPMLAGVDHHTSTADDIRHSLQVLGSIAVVVIGGRYLLRPVFRVVAKTGLPEVSTATALLVVIGTAWLMDMV GVSMALGAFLAGLLLADSEYRHELEAQIEPFKGLLLGLFFISVGMGANLSLLLSAPITVLGLTLLLIALKLPLLFVVGRL AGGLNKVSAIRLGIVLAAGGEFAFVVFKIGRDQGLFEPRLYDLLVLTITLSMAVTPLLLLVCARLVSPKVQPVEVPEKFR QIETESPRVVIAGMGRMGQIVARILRAQNIKFVALDTSVETIELSRSFGGVPVFYGDPMRPEILSAAKVGEAEYFVIATD DPETNIKTAEIVRKLYPDMKIIARARNRQHVHRLVDVGADPIRETYYSSLEMSRRTLVGLGLTQAQADARIKRFKHHDEQ VLEAQHAVYDDAAKVLQTAQEARAELARLFESDQLEEQSGKS >Mature_601_residues PHEGNLLQAAVVFLLAAVLTVPLAKRLQLGAVLGYLFAGVIIGPSVLGLIGNPQSVSHISELGVVLLLFIIGLELSPRRL WVMRKSVFGVGLAQVLLTGSVIGVLALSVFGQPLNSAIVLGLGLALSSTAFGLQSLAERKELTSPHGRLAFAILLFQDIA AIPLIALVPMLAGVDHHTSTADDIRHSLQVLGSIAVVVIGGRYLLRPVFRVVAKTGLPEVSTATALLVVIGTAWLMDMVG VSMALGAFLAGLLLADSEYRHELEAQIEPFKGLLLGLFFISVGMGANLSLLLSAPITVLGLTLLLIALKLPLLFVVGRLA GGLNKVSAIRLGIVLAAGGEFAFVVFKIGRDQGLFEPRLYDLLVLTITLSMAVTPLLLLVCARLVSPKVQPVEVPEKFRQ IETESPRVVIAGMGRMGQIVARILRAQNIKFVALDTSVETIELSRSFGGVPVFYGDPMRPEILSAAKVGEAEYFVIATDD PETNIKTAEIVRKLYPDMKIIARARNRQHVHRLVDVGADPIRETYYSSLEMSRRTLVGLGLTQAQADARIKRFKHHDEQV LEAQHAVYDDAAKVLQTAQEARAELARLFESDQLEEQSGKS
Specific function: Transport system that facilitates potassium-efflux, possibly by potassium-proton antiport [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI157388921, Length=400, Percent_Identity=27.5, Blast_Score=83, Evalue=9e-16, Organism=Escherichia coli, GI1786232, Length=592, Percent_Identity=42.9054054054054, Blast_Score=445, Evalue=1e-126, Organism=Escherichia coli, GI1789749, Length=595, Percent_Identity=43.6974789915966, Blast_Score=437, Evalue=1e-124, Organism=Escherichia coli, GI1786685, Length=553, Percent_Identity=28.75226039783, Blast_Score=167, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6322367, Length=406, Percent_Identity=23.3990147783251, Blast_Score=75, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR020884 - InterPro: IPR004771 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 64775; Mature: 64643
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHEGNLLQAAVVFLLAAVLTVPLAKRLQLGAVLGYLFAGVIIGPSVLGLIGNPQSVSHI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH SELGVVLLLFIIGLELSPRRLWVMRKSVFGVGLAQVLLTGSVIGVLALSVFGQPLNSAIV HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LGLGLALSSTAFGLQSLAERKELTSPHGRLAFAILLFQDIAAIPLIALVPMLAGVDHHTS HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TADDIRHSLQVLGSIAVVVIGGRYLLRPVFRVVAKTGLPEVSTATALLVVIGTAWLMDMV CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH GVSMALGAFLAGLLLADSEYRHELEAQIEPFKGLLLGLFFISVGMGANLSLLLSAPITVL HHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHH GLTLLLIALKLPLLFVVGRLAGGLNKVSAIRLGIVLAAGGEFAFVVFKIGRDQGLFEPRL HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEECCCCEEEEEEEECCCCCCCCHHH YDLLVLTITLSMAVTPLLLLVCARLVSPKVQPVEVPEKFRQIETESPRVVIAGMGRMGQI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCEEEEECCCHHHHH VARILRAQNIKFVALDTSVETIELSRSFGGVPVFYGDPMRPEILSAAKVGEAEYFVIATD HHHHHHHCCCEEEEECCCCHHHEEHHCCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECC DPETNIKTAEIVRKLYPDMKIIARARNRQHVHRLVDVGADPIRETYYSSLEMSRRTLVGL CCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC GLTQAQADARIKRFKHHDEQVLEAQHAVYDDAAKVLQTAQEARAELARLFESDQLEEQSG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KS CC >Mature Secondary Structure PHEGNLLQAAVVFLLAAVLTVPLAKRLQLGAVLGYLFAGVIIGPSVLGLIGNPQSVSHI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH SELGVVLLLFIIGLELSPRRLWVMRKSVFGVGLAQVLLTGSVIGVLALSVFGQPLNSAIV HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LGLGLALSSTAFGLQSLAERKELTSPHGRLAFAILLFQDIAAIPLIALVPMLAGVDHHTS HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TADDIRHSLQVLGSIAVVVIGGRYLLRPVFRVVAKTGLPEVSTATALLVVIGTAWLMDMV CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH GVSMALGAFLAGLLLADSEYRHELEAQIEPFKGLLLGLFFISVGMGANLSLLLSAPITVL HHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHH GLTLLLIALKLPLLFVVGRLAGGLNKVSAIRLGIVLAAGGEFAFVVFKIGRDQGLFEPRL HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEECCCCEEEEEEEECCCCCCCCHHH YDLLVLTITLSMAVTPLLLLVCARLVSPKVQPVEVPEKFRQIETESPRVVIAGMGRMGQI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCEEEEECCCHHHHH VARILRAQNIKFVALDTSVETIELSRSFGGVPVFYGDPMRPEILSAAKVGEAEYFVIATD HHHHHHHCCCEEEEECCCCHHHEEHHCCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECC DPETNIKTAEIVRKLYPDMKIIARARNRQHVHRLVDVGADPIRETYYSSLEMSRRTLVGL CCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC GLTQAQADARIKRFKHHDEQVLEAQHAVYDDAAKVLQTAQEARAELARLFESDQLEEQSG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KS CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Cytoplasm] = Proton [Cytoplasm] + K (I) [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA