Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is 77459573
Identifier: 77459573
GI number: 77459573
Start: 3826011
End: 3826685
Strand: Direct
Name: 77459573
Synonym: Pfl01_3351
Alternate gene names: NA
Gene position: 3826011-3826685 (Clockwise)
Preceding gene: 77459572
Following gene: 77459574
Centisome position: 59.42
GC content: 61.19
Gene sequence:
>675_bases ATGAGTTTTTTCGACACCCTGCAAGAAGCCACGCACCAGGAACGCCACGAGCTGTTCAATCTGCCGATCATCCTCGATGC GCTGCAAGGCAAGGTCAGCCTTGAAAGCTATCGCGCGTTTCTCGCCCAGGCCTACTACCACGTGCGCCACACCGTACCGC TGATGATGGCCTGTGGTGCACGCCTGCCGACGCACCTGGAATGGCTGCGCAAAGCCGTGTGCGAATACATCGAGGACGAA TACGGTCATGAGCAATGGGTGCTCAACGACATCGAGGCCTGTGGCGGTGACCGTAACGCGGTGCGTGATGGCCAGCCGTC GCTGCCGATCGAGCTGATGGTCAGCTTTCTCTACGACCTGATCGCCCGAGGCAATCCGGTGGGTCTGTTTGGCATGGTCA ACGTGCTGGAGGGCACCAGCATCGCCTTGGCCACCCATGCGGCGGGCAGCATCCGCGAACGTCTGGCGCTGCCGGAAACG GCGTTCAGCTACCTCAGTTCCCACGGTTCGCTGGACATCGAGCACATGCAAACCTATCGCCGGCTGATGAATCAGCTGGA AGATCCGGCCGACCAGGCGGCGGTGATCCATGCCTCGAAAGTCGTCTATCGGCTCTACGCCGACATGTTCCGCGGCCTGC CCCGTGACGCGGAGGCTCAACATGCAGCTGCATGA
Upstream 100 bases:
>100_bases ACGGCCTGCTCACCGCCAACGGTCGCCCGCGCCGCGAGGCAATCGTCGCGCAGTACCGCGCCGTGCTTATCGAATCCGCC CTTTCCGAGGAATCCGCACC
Downstream 100 bases:
>100_bases AGCCCGTGTGGTGTTGACCGGTGCCAGCGGCGGCATCGGGATAGCGATCACGCGTGCCTTGTGCGCTGCCGGTGCGCAGG TCCTGGCGGTCGCGCGGCAT
Product: TenA family transcription regulator
Products: NA
Alternate protein names: Transcriptional Activator TenA Family; Carbamoylphosphate Synthase Large Subunit; 3-Oxoacyl-(Acyl-Carrier-Protein) Synthase III; Heme Oxygenase Family; TenA Family Transcriptional Activator; Heme Oxygenase ; Heme Oxygenase Family Protein; AMP-Dependent Synthetase And Ligase; TenA Family Transcription Regulator; Long-Chain-Fatty-Acid-CoA Ligase
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MSFFDTLQEATHQERHELFNLPIILDALQGKVSLESYRAFLAQAYYHVRHTVPLMMACGARLPTHLEWLRKAVCEYIEDE YGHEQWVLNDIEACGGDRNAVRDGQPSLPIELMVSFLYDLIARGNPVGLFGMVNVLEGTSIALATHAAGSIRERLALPET AFSYLSSHGSLDIEHMQTYRRLMNQLEDPADQAAVIHASKVVYRLYADMFRGLPRDAEAQHAAA
Sequences:
>Translated_224_residues MSFFDTLQEATHQERHELFNLPIILDALQGKVSLESYRAFLAQAYYHVRHTVPLMMACGARLPTHLEWLRKAVCEYIEDE YGHEQWVLNDIEACGGDRNAVRDGQPSLPIELMVSFLYDLIARGNPVGLFGMVNVLEGTSIALATHAAGSIRERLALPET AFSYLSSHGSLDIEHMQTYRRLMNQLEDPADQAAVIHASKVVYRLYADMFRGLPRDAEAQHAAA >Mature_223_residues SFFDTLQEATHQERHELFNLPIILDALQGKVSLESYRAFLAQAYYHVRHTVPLMMACGARLPTHLEWLRKAVCEYIEDEY GHEQWVLNDIEACGGDRNAVRDGQPSLPIELMVSFLYDLIARGNPVGLFGMVNVLEGTSIALATHAAGSIRERLALPETA FSYLSSHGSLDIEHMQTYRRLMNQLEDPADQAAVIHASKVVYRLYADMFRGLPRDAEAQHAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25201; Mature: 25070
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFFDTLQEATHQERHELFNLPIILDALQGKVSLESYRAFLAQAYYHVRHTVPLMMACGA CCHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RLPTHLEWLRKAVCEYIEDEYGHEQWVLNDIEACGGDRNAVRDGQPSLPIELMVSFLYDL CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH IARGNPVGLFGMVNVLEGTSIALATHAAGSIRERLALPETAFSYLSSHGSLDIEHMQTYR HHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHH RLMNQLEDPADQAAVIHASKVVYRLYADMFRGLPRDAEAQHAAA HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCC >Mature Secondary Structure SFFDTLQEATHQERHELFNLPIILDALQGKVSLESYRAFLAQAYYHVRHTVPLMMACGA CHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RLPTHLEWLRKAVCEYIEDEYGHEQWVLNDIEACGGDRNAVRDGQPSLPIELMVSFLYDL CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH IARGNPVGLFGMVNVLEGTSIALATHAAGSIRERLALPETAFSYLSSHGSLDIEHMQTYR HHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHH RLMNQLEDPADQAAVIHASKVVYRLYADMFRGLPRDAEAQHAAA HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA