Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77459571

Identifier: 77459571

GI number: 77459571

Start: 3823866

End: 3824543

Strand: Direct

Name: 77459571

Synonym: Pfl01_3349

Alternate gene names: NA

Gene position: 3823866-3824543 (Clockwise)

Preceding gene: 77459569

Following gene: 77459572

Centisome position: 59.39

GC content: 60.77

Gene sequence:

>678_bases
ATGCCCGATTCTGACTGGAATATTCCCCTGCCCCTGCATTTTGGCCAAGGCGAAACACCGCAGATGCAGCTGTCGAGCGC
CCAACCCGGCGATGCTCAACGAGCGGCGTTCGAAGCGTTCATTCAACAACGCTTTCGCAAGGCCCACGGCGCCGATATCC
GCCATTTCATGCCTGAACTGTTTGGTGTGCACAACGACTCCGGCGACTTGTGCGCGGTGGCCGGGGTACGTCGTGCGCAC
CTTGAACCGCTGTTTCTTGAACGCTACCTGGACGAGCCGATCGAGCCGTTGATCAGCGCAGCCGCCGAGCGTCCGGTGGA
GCGTAGCGCGATTGTCGAAGTCGGCAACCTTGCCGCGAACGACACCGGCAGCGCACGCCTGAGCATCATTGCCATCACTT
ACCTGTTGGCCATGGGCGGTCTGGAATGGGTGACCTTCACCGGCAATATCGGCCTGGTCAACAGCTTCCATCGCCTGGGT
CTGAAACCGGTGACGCTGTGCGCCGCCGACCCCGAACGTCTGGGCGATGACCGTCACCACTGGGGCAGTTACTACGAAAG
CAAACCCTGGGTGCACGTGGGCAATATCCGCGCCGGTTTCATCCATCTGCGCAACATCGGTCTGTTCAGTCGGCTGGGAT
TGCCGACTTCTGTCGAAGGAGCCTGCCATGTCGCTTGA

Upstream 100 bases:

>100_bases
TCTGAAGATCCGTCGTTCGTTAACCTTTTTTCACCTTCAGACTTCGTTAAGAAATGGTCCGGATACTCCACTCAAACCTA
TTGAGGGAGGCGTTCAGCCC

Downstream 100 bases:

>100_bases
ACGTCAACGATTCCAGGAAACCCTGCGCAGCCATGCAGGGCGCAATGACAACGCTTTGGCATTGTGGGGCGACACCCTGA
AAGTCAGTTACACGACGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MPDSDWNIPLPLHFGQGETPQMQLSSAQPGDAQRAAFEAFIQQRFRKAHGADIRHFMPELFGVHNDSGDLCAVAGVRRAH
LEPLFLERYLDEPIEPLISAAAERPVERSAIVEVGNLAANDTGSARLSIIAITYLLAMGGLEWVTFTGNIGLVNSFHRLG
LKPVTLCAADPERLGDDRHHWGSYYESKPWVHVGNIRAGFIHLRNIGLFSRLGLPTSVEGACHVA

Sequences:

>Translated_225_residues
MPDSDWNIPLPLHFGQGETPQMQLSSAQPGDAQRAAFEAFIQQRFRKAHGADIRHFMPELFGVHNDSGDLCAVAGVRRAH
LEPLFLERYLDEPIEPLISAAAERPVERSAIVEVGNLAANDTGSARLSIIAITYLLAMGGLEWVTFTGNIGLVNSFHRLG
LKPVTLCAADPERLGDDRHHWGSYYESKPWVHVGNIRAGFIHLRNIGLFSRLGLPTSVEGACHVA
>Mature_224_residues
PDSDWNIPLPLHFGQGETPQMQLSSAQPGDAQRAAFEAFIQQRFRKAHGADIRHFMPELFGVHNDSGDLCAVAGVRRAHL
EPLFLERYLDEPIEPLISAAAERPVERSAIVEVGNLAANDTGSARLSIIAITYLLAMGGLEWVTFTGNIGLVNSFHRLGL
KPVTLCAADPERLGDDRHHWGSYYESKPWVHVGNIRAGFIHLRNIGLFSRLGLPTSVEGACHVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24723; Mature: 24592

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDSDWNIPLPLHFGQGETPQMQLSSAQPGDAQRAAFEAFIQQRFRKAHGADIRHFMPEL
CCCCCCCCCEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
FGVHNDSGDLCAVAGVRRAHLEPLFLERYLDEPIEPLISAAAERPVERSAIVEVGNLAAN
HCCCCCCCCEEHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHCCCCCC
DTGSARLSIIAITYLLAMGGLEWVTFTGNIGLVNSFHRLGLKPVTLCAADPERLGDDRHH
CCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCEEEEECCCHHHCCCCHHH
WGSYYESKPWVHVGNIRAGFIHLRNIGLFSRLGLPTSVEGACHVA
HCCCCCCCCCEEECCCEEEEEEEECCCHHHHCCCCCCCCCCEECC
>Mature Secondary Structure 
PDSDWNIPLPLHFGQGETPQMQLSSAQPGDAQRAAFEAFIQQRFRKAHGADIRHFMPEL
CCCCCCCCEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
FGVHNDSGDLCAVAGVRRAHLEPLFLERYLDEPIEPLISAAAERPVERSAIVEVGNLAAN
HCCCCCCCCEEHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHCCCCCC
DTGSARLSIIAITYLLAMGGLEWVTFTGNIGLVNSFHRLGLKPVTLCAADPERLGDDRHH
CCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCEEEEECCCHHHCCCCHHH
WGSYYESKPWVHVGNIRAGFIHLRNIGLFSRLGLPTSVEGACHVA
HCCCCCCCCCEEECCCEEEEEEEECCCHHHHCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA