Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is 77459571
Identifier: 77459571
GI number: 77459571
Start: 3823866
End: 3824543
Strand: Direct
Name: 77459571
Synonym: Pfl01_3349
Alternate gene names: NA
Gene position: 3823866-3824543 (Clockwise)
Preceding gene: 77459569
Following gene: 77459572
Centisome position: 59.39
GC content: 60.77
Gene sequence:
>678_bases ATGCCCGATTCTGACTGGAATATTCCCCTGCCCCTGCATTTTGGCCAAGGCGAAACACCGCAGATGCAGCTGTCGAGCGC CCAACCCGGCGATGCTCAACGAGCGGCGTTCGAAGCGTTCATTCAACAACGCTTTCGCAAGGCCCACGGCGCCGATATCC GCCATTTCATGCCTGAACTGTTTGGTGTGCACAACGACTCCGGCGACTTGTGCGCGGTGGCCGGGGTACGTCGTGCGCAC CTTGAACCGCTGTTTCTTGAACGCTACCTGGACGAGCCGATCGAGCCGTTGATCAGCGCAGCCGCCGAGCGTCCGGTGGA GCGTAGCGCGATTGTCGAAGTCGGCAACCTTGCCGCGAACGACACCGGCAGCGCACGCCTGAGCATCATTGCCATCACTT ACCTGTTGGCCATGGGCGGTCTGGAATGGGTGACCTTCACCGGCAATATCGGCCTGGTCAACAGCTTCCATCGCCTGGGT CTGAAACCGGTGACGCTGTGCGCCGCCGACCCCGAACGTCTGGGCGATGACCGTCACCACTGGGGCAGTTACTACGAAAG CAAACCCTGGGTGCACGTGGGCAATATCCGCGCCGGTTTCATCCATCTGCGCAACATCGGTCTGTTCAGTCGGCTGGGAT TGCCGACTTCTGTCGAAGGAGCCTGCCATGTCGCTTGA
Upstream 100 bases:
>100_bases TCTGAAGATCCGTCGTTCGTTAACCTTTTTTCACCTTCAGACTTCGTTAAGAAATGGTCCGGATACTCCACTCAAACCTA TTGAGGGAGGCGTTCAGCCC
Downstream 100 bases:
>100_bases ACGTCAACGATTCCAGGAAACCCTGCGCAGCCATGCAGGGCGCAATGACAACGCTTTGGCATTGTGGGGCGACACCCTGA AAGTCAGTTACACGACGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MPDSDWNIPLPLHFGQGETPQMQLSSAQPGDAQRAAFEAFIQQRFRKAHGADIRHFMPELFGVHNDSGDLCAVAGVRRAH LEPLFLERYLDEPIEPLISAAAERPVERSAIVEVGNLAANDTGSARLSIIAITYLLAMGGLEWVTFTGNIGLVNSFHRLG LKPVTLCAADPERLGDDRHHWGSYYESKPWVHVGNIRAGFIHLRNIGLFSRLGLPTSVEGACHVA
Sequences:
>Translated_225_residues MPDSDWNIPLPLHFGQGETPQMQLSSAQPGDAQRAAFEAFIQQRFRKAHGADIRHFMPELFGVHNDSGDLCAVAGVRRAH LEPLFLERYLDEPIEPLISAAAERPVERSAIVEVGNLAANDTGSARLSIIAITYLLAMGGLEWVTFTGNIGLVNSFHRLG LKPVTLCAADPERLGDDRHHWGSYYESKPWVHVGNIRAGFIHLRNIGLFSRLGLPTSVEGACHVA >Mature_224_residues PDSDWNIPLPLHFGQGETPQMQLSSAQPGDAQRAAFEAFIQQRFRKAHGADIRHFMPELFGVHNDSGDLCAVAGVRRAHL EPLFLERYLDEPIEPLISAAAERPVERSAIVEVGNLAANDTGSARLSIIAITYLLAMGGLEWVTFTGNIGLVNSFHRLGL KPVTLCAADPERLGDDRHHWGSYYESKPWVHVGNIRAGFIHLRNIGLFSRLGLPTSVEGACHVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24723; Mature: 24592
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDSDWNIPLPLHFGQGETPQMQLSSAQPGDAQRAAFEAFIQQRFRKAHGADIRHFMPEL CCCCCCCCCEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH FGVHNDSGDLCAVAGVRRAHLEPLFLERYLDEPIEPLISAAAERPVERSAIVEVGNLAAN HCCCCCCCCEEHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHCCCCCC DTGSARLSIIAITYLLAMGGLEWVTFTGNIGLVNSFHRLGLKPVTLCAADPERLGDDRHH CCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCEEEEECCCHHHCCCCHHH WGSYYESKPWVHVGNIRAGFIHLRNIGLFSRLGLPTSVEGACHVA HCCCCCCCCCEEECCCEEEEEEEECCCHHHHCCCCCCCCCCEECC >Mature Secondary Structure PDSDWNIPLPLHFGQGETPQMQLSSAQPGDAQRAAFEAFIQQRFRKAHGADIRHFMPEL CCCCCCCCEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH FGVHNDSGDLCAVAGVRRAHLEPLFLERYLDEPIEPLISAAAERPVERSAIVEVGNLAAN HCCCCCCCCEEHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHCCCCCC DTGSARLSIIAITYLLAMGGLEWVTFTGNIGLVNSFHRLGLKPVTLCAADPERLGDDRHH CCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCEEEEECCCHHHCCCCHHH WGSYYESKPWVHVGNIRAGFIHLRNIGLFSRLGLPTSVEGACHVA HCCCCCCCCCEEECCCEEEEEEEECCCHHHHCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA