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The map label for this gene is glxA [H]

Identifier: 77458942

GI number: 77458942

Start: 3133816

End: 3134793

Strand: Direct

Name: glxA [H]

Synonym: Pfl01_2717

Alternate gene names: 77458942

Gene position: 3133816-3134793 (Clockwise)

Preceding gene: 77458938

Following gene: 77458947

Centisome position: 48.67

GC content: 60.43

Gene sequence:

>978_bases
ATGCATCGCGTCGGCTATCTGATTACCGAAGGTTTTCAGGTGATGTCCCTGGCAACCCAGGCTGTATTCGAGTTCGCCAA
CATCGTTGCGGGAGAAGAGATCTACAAGGTCCAGAACTTCTCGATCGGTGGTGGGACCGTGCGTTCTTCGTTGGGCATGT
ACATCGACACGCTCCCTCTGGGCGCCCCGGGATTGGCCGACACGTGGATGATTACCGGTACGCTGACCCCGTTGAATCGA
CCAGATGAAGAAGTGTTGGCCAGCGTGCGCGCCTTCGTCGATGGAGCCCGACGCACAGCAGGTCTGTGTACCGGCTCGTT
CGTTCTGGCGCAGGCTGGGGTTCTGGACGATCGGAGGGCGACCACCCACTGGGCCTATGCGAACAAGCTCCGTGAGCTGC
ATCCAAGAATCGAGGTCGAGGAAGACCGGATCTTCATCGTCGACGGTCCCGTCTGGACGTCGGCAGGCATGACAGCCGCG
CTGGACATGGCGCTGGGCATGGTGGAAAAGGATCTGGGCACCGACATGGCCAGGTCGGTGGCGCACAAACTGGTCATGCA
TCAACGGCGTTCGGGTGGGCAATCCCAGCATTCGGAACTGCTTACGCTTGCTCCAAAGTCGGACCGTATTCAAAGTGCGC
TGGAGTATGCGCGCACGCACCTGGACCGCCCGCTCAGCGTGGAGGAACTTGCCGACGTCGTGCACTTGAGCCCAAGACAA
TTCACCCGGGTGTTTACTGCCGAGACAGGCCAGTCACCGGCCAAGGCTGTTGAAAGCCTGCGTCTGGAGGCCGCTCGCGT
GATGATCGAGCAAAGTCGTCACAGCCTGGAACGCGTGGCGAAGGAAACGGGGTTTCGAGACCGTCGCCACATGCGCGAAG
TATTCATGCGAGGGTTTGGCGTTCCGCCGCAGGCAGTTCGAAGGGATGCCAGGCGGATCGGCCAGGAGAATCCATCTGAT
CGGGCCGCTCATCCGTAA

Upstream 100 bases:

>100_bases
AGCTCCGTGGGTTGTGTGTGGAGCCATGATGAAGGAGGGGACTGATGTCTTAAACGACGTATATGGTAGTGTTTAAGGAC
ATTCAAAAAGGAGTTCAGTC

Downstream 100 bases:

>100_bases
GCGCCCCGATCAGCAGTCAAAGCCAGGATTTGATTTGCGCGCAGACGGCGTCGGTGGAAATGCCATAGCGATCATGCAGT
GTCGGCAATGCACCGGCGTC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MHRVGYLITEGFQVMSLATQAVFEFANIVAGEEIYKVQNFSIGGGTVRSSLGMYIDTLPLGAPGLADTWMITGTLTPLNR
PDEEVLASVRAFVDGARRTAGLCTGSFVLAQAGVLDDRRATTHWAYANKLRELHPRIEVEEDRIFIVDGPVWTSAGMTAA
LDMALGMVEKDLGTDMARSVAHKLVMHQRRSGGQSQHSELLTLAPKSDRIQSALEYARTHLDRPLSVEELADVVHLSPRQ
FTRVFTAETGQSPAKAVESLRLEAARVMIEQSRHSLERVAKETGFRDRRHMREVFMRGFGVPPQAVRRDARRIGQENPSD
RAAHP

Sequences:

>Translated_325_residues
MHRVGYLITEGFQVMSLATQAVFEFANIVAGEEIYKVQNFSIGGGTVRSSLGMYIDTLPLGAPGLADTWMITGTLTPLNR
PDEEVLASVRAFVDGARRTAGLCTGSFVLAQAGVLDDRRATTHWAYANKLRELHPRIEVEEDRIFIVDGPVWTSAGMTAA
LDMALGMVEKDLGTDMARSVAHKLVMHQRRSGGQSQHSELLTLAPKSDRIQSALEYARTHLDRPLSVEELADVVHLSPRQ
FTRVFTAETGQSPAKAVESLRLEAARVMIEQSRHSLERVAKETGFRDRRHMREVFMRGFGVPPQAVRRDARRIGQENPSD
RAAHP
>Mature_325_residues
MHRVGYLITEGFQVMSLATQAVFEFANIVAGEEIYKVQNFSIGGGTVRSSLGMYIDTLPLGAPGLADTWMITGTLTPLNR
PDEEVLASVRAFVDGARRTAGLCTGSFVLAQAGVLDDRRATTHWAYANKLRELHPRIEVEEDRIFIVDGPVWTSAGMTAA
LDMALGMVEKDLGTDMARSVAHKLVMHQRRSGGQSQHSELLTLAPKSDRIQSALEYARTHLDRPLSVEELADVVHLSPRQ
FTRVFTAETGQSPAKAVESLRLEAARVMIEQSRHSLERVAKETGFRDRRHMREVFMRGFGVPPQAVRRDARRIGQENPSD
RAAHP

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 36014; Mature: 36014

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRVGYLITEGFQVMSLATQAVFEFANIVAGEEIYKVQNFSIGGGTVRSSLGMYIDTLPL
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCC
GAPGLADTWMITGTLTPLNRPDEEVLASVRAFVDGARRTAGLCTGSFVLAQAGVLDDRRA
CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
TTHWAYANKLRELHPRIEVEEDRIFIVDGPVWTSAGMTAALDMALGMVEKDLGTDMARSV
HHHHHHHHHHHHHCCCCEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHH
AHKLVMHQRRSGGQSQHSELLTLAPKSDRIQSALEYARTHLDRPLSVEELADVVHLSPRQ
HHHHHHHHHHCCCCHHHCCEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHH
FTRVFTAETGQSPAKAVESLRLEAARVMIEQSRHSLERVAKETGFRDRRHMREVFMRGFG
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
VPPQAVRRDARRIGQENPSDRAAHP
CCHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MHRVGYLITEGFQVMSLATQAVFEFANIVAGEEIYKVQNFSIGGGTVRSSLGMYIDTLPL
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCC
GAPGLADTWMITGTLTPLNRPDEEVLASVRAFVDGARRTAGLCTGSFVLAQAGVLDDRRA
CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
TTHWAYANKLRELHPRIEVEEDRIFIVDGPVWTSAGMTAALDMALGMVEKDLGTDMARSV
HHHHHHHHHHHHHCCCCEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHH
AHKLVMHQRRSGGQSQHSELLTLAPKSDRIQSALEYARTHLDRPLSVEELADVVHLSPRQ
HHHHHHHHHHCCCCHHHCCEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHH
FTRVFTAETGQSPAKAVESLRLEAARVMIEQSRHSLERVAKETGFRDRRHMREVFMRGFG
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
VPPQAVRRDARRIGQENPSDRAAHP
CCHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]