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The map label for this gene is ycaO [H]

Identifier: 77458935

GI number: 77458935

Start: 3123380

End: 3125575

Strand: Direct

Name: ycaO [H]

Synonym: Pfl01_2710

Alternate gene names: 77458935

Gene position: 3123380-3125575 (Clockwise)

Preceding gene: 77458932

Following gene: 77458938

Centisome position: 48.51

GC content: 59.93

Gene sequence:

>2196_bases
ATGGAAATCAAGGTCAATTTTCTCGACAACCTCCGACTCGAAGCCAAGTTCGATGACTTCACGGTGGTGGCCGACCAACC
GATCCGTTACAAGGGCGATGGCTCTGCTCCGGGTCCGTTCGACTATTTCCTGGCGTCTTCGGCCTTGTGCGCGGCTTACT
TCGTAAAGTTGTACTGCAGCACCCGCAATATCCCGACCGAAAACATTCGTCTGTCGCAGAACAACATTGTCGATCCGGAA
AACCGCTACAACCAGATCTTCAAAATCCAGGTCGAGCTGCCGGCGGACATTTCCGAAAAGGATCGCCAGGGCATCCTGCG
CTCGATCGACCGTTGCACGGTGAAGAAGGTGGTGCAGGCCGGGCCAGAGTTCGTGATCGAGGAAGTCGAGAACCTCGACG
CCGATGCCCAGGCCCTGCTGATGCCGGCTTCCACGTCCGGCGCGGGCACCTGCATTGCCGGCAAGGACCTGCCGCTGGAA
CAGACCATCGCCAATATGTCGGGGATTCTGGCCGACCTGGGCATGAAGATCGAAATCGCTTCGTGGCGCAACATCGTGCC
CAACGTCTGGTCGCTGCACATCCGCGATGCGCAGTCGCCGATGTGCTTCACCAACGGCAAGGGTGCGACCAAAGAGGGCG
CGCTGGCCTCGGCGCTGGGCGAGTTCATCGAGCGGCTGAACTGCAACTTCTTCTACAACGATCAGTTCTGGGGCGAAGAG
ATCGCCAATGCCGAGTTCGTGCATTACCCGGACGAGCGCTGGTTCAAGCCCGGCGCCAAAGACGAGTTGCCTGCGGAAAT
CCTCGACGAATATTGCCTGGGCATTTACAACCGCGACGGCGAACTGCGCGGCTCGCACCTGTACGACACCAACTCCGGCA
ACACCCAGCGCGGTATCTGCTCGCTGCCGTTCGTGCGTCAGTCTGACGGCGAGGTGGTGTACTTTCCGTCCAACCTGATC
GAAAACCTGTTTCTCAGCAACGGCATGAGCGCCGGCAACACCCTGGCTGAAGCCCAGGTGCAGTGCCTGTCGGAAATCTT
CGAGCGGGCGGTCAAACGCGAAATCCTCGAAGGCGAAATGGCCCTGCCGGATGTACCGCAAGAGGTGCTGGCGAAGTACC
CGGGCATCCTCGCCGGGATCAAGGCGCTGGAAGAGCAGGGTTTCCCGGTGCTGGTCAAGGACGCGTCGCTGGGCGGTGAG
TTCCCGGTGATGTGCGTGACGCTGATGAACCCGCGCACCGGCGGCGTGTTCGCCTCGTTCGGCGCGCACCCGAGCTTCGA
AGTGGCGCTGGAACGCAGCCTCACCGAGTTGCTGCAGGGCCGCAGCTTCGAAGGCCTCAACGATCTGCCACAGCCGACCT
TCTCGGGCCAGGCTGTGACGGAGCCGAACAACTTCGTGGAGCACTTCATCGATTCCAGCGGCGTGGTGTCGTGGCGCTTC
TTCAGCGCCAAAGCCGACTTCGAATTCGTCGAGTGGGACTTCTCCGGCAACGGCGAAAACTCCAACGCCGAAGAGGCCGC
GACGTTGTTCGGCATCCTTGAAGACATGGGCAAGGAAGTCTACATGGCGGTCTACGAGCACATCGGCGCCAAGGCGTGCC
GCATTCTGGTGCCGGACTATTCGGAGATCTATCCGGTAGAAGACCTGATCTGGGACAACACCAACAAAGCGCTGCAATTC
CGTGCGGATATCCTCAACCTGCACAACCTGAGCAAAGTCGGCCTGCGCAACCTCGCCAAAGGCCTGGAACACAGTGAACT
GGACGATTACACCGACATCACCACGCTGATCGGCATCGAGTTTGACGACAACACCCCATGGGGCAAGTTGACCATTCTCG
AACTGCGCCTGCTGATCTACCTCGCCTTGCAGAAGTACGAGCAGGCCAAGGATCTGGTCGAAGCCTTCCTGCAATACAAC
GACAACACCGTCGAGCGCGGCTTGTTCTATCAAGCGGTCAACGTTGTGCTGGAAATGGAGCTGGACGAGGATCTGCAGTT
GGAAGACTACGAAGCCAACTTCCGCCGCATGTTCGGCGACGAGCGCATGGATGCGGCGATCGGTTCGGTCAACGGCAGCG
TGCGCTTCTACGGCCTGACGCCGACCAGCATGAAGCTGGAAGGGCTGGATCGGCACCTGCGCCTGATCGAGAGCTACAAG
AAACTGCACGCAGCGCGGGCCAACTTCGCGGGTTGA

Upstream 100 bases:

>100_bases
TCTGCCCGCTCAGGTCCCCTTGCGCAAAAGCACAAGACTTCACGCTCAAAAGCCGGATAATGGCGGCCAATTTGTTTAGC
CCGCTATTCTGGTAACCCGC

Downstream 100 bases:

>100_bases
TTCCGTTGGCAGCAGGCACAAAAAAAGCACCTTCGCGGGTGCTTTTTTTGTGGTCGGCAGATGATGGTGTCAGAGCGCGG
CTTTCACCTGCAATCCAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 731; Mature: 731

Protein sequence:

>731_residues
MEIKVNFLDNLRLEAKFDDFTVVADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCSTRNIPTENIRLSQNNIVDPE
NRYNQIFKIQVELPADISEKDRQGILRSIDRCTVKKVVQAGPEFVIEEVENLDADAQALLMPASTSGAGTCIAGKDLPLE
QTIANMSGILADLGMKIEIASWRNIVPNVWSLHIRDAQSPMCFTNGKGATKEGALASALGEFIERLNCNFFYNDQFWGEE
IANAEFVHYPDERWFKPGAKDELPAEILDEYCLGIYNRDGELRGSHLYDTNSGNTQRGICSLPFVRQSDGEVVYFPSNLI
ENLFLSNGMSAGNTLAEAQVQCLSEIFERAVKREILEGEMALPDVPQEVLAKYPGILAGIKALEEQGFPVLVKDASLGGE
FPVMCVTLMNPRTGGVFASFGAHPSFEVALERSLTELLQGRSFEGLNDLPQPTFSGQAVTEPNNFVEHFIDSSGVVSWRF
FSAKADFEFVEWDFSGNGENSNAEEAATLFGILEDMGKEVYMAVYEHIGAKACRILVPDYSEIYPVEDLIWDNTNKALQF
RADILNLHNLSKVGLRNLAKGLEHSELDDYTDITTLIGIEFDDNTPWGKLTILELRLLIYLALQKYEQAKDLVEAFLQYN
DNTVERGLFYQAVNVVLEMELDEDLQLEDYEANFRRMFGDERMDAAIGSVNGSVRFYGLTPTSMKLEGLDRHLRLIESYK
KLHAARANFAG

Sequences:

>Translated_731_residues
MEIKVNFLDNLRLEAKFDDFTVVADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCSTRNIPTENIRLSQNNIVDPE
NRYNQIFKIQVELPADISEKDRQGILRSIDRCTVKKVVQAGPEFVIEEVENLDADAQALLMPASTSGAGTCIAGKDLPLE
QTIANMSGILADLGMKIEIASWRNIVPNVWSLHIRDAQSPMCFTNGKGATKEGALASALGEFIERLNCNFFYNDQFWGEE
IANAEFVHYPDERWFKPGAKDELPAEILDEYCLGIYNRDGELRGSHLYDTNSGNTQRGICSLPFVRQSDGEVVYFPSNLI
ENLFLSNGMSAGNTLAEAQVQCLSEIFERAVKREILEGEMALPDVPQEVLAKYPGILAGIKALEEQGFPVLVKDASLGGE
FPVMCVTLMNPRTGGVFASFGAHPSFEVALERSLTELLQGRSFEGLNDLPQPTFSGQAVTEPNNFVEHFIDSSGVVSWRF
FSAKADFEFVEWDFSGNGENSNAEEAATLFGILEDMGKEVYMAVYEHIGAKACRILVPDYSEIYPVEDLIWDNTNKALQF
RADILNLHNLSKVGLRNLAKGLEHSELDDYTDITTLIGIEFDDNTPWGKLTILELRLLIYLALQKYEQAKDLVEAFLQYN
DNTVERGLFYQAVNVVLEMELDEDLQLEDYEANFRRMFGDERMDAAIGSVNGSVRFYGLTPTSMKLEGLDRHLRLIESYK
KLHAARANFAG
>Mature_731_residues
MEIKVNFLDNLRLEAKFDDFTVVADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCSTRNIPTENIRLSQNNIVDPE
NRYNQIFKIQVELPADISEKDRQGILRSIDRCTVKKVVQAGPEFVIEEVENLDADAQALLMPASTSGAGTCIAGKDLPLE
QTIANMSGILADLGMKIEIASWRNIVPNVWSLHIRDAQSPMCFTNGKGATKEGALASALGEFIERLNCNFFYNDQFWGEE
IANAEFVHYPDERWFKPGAKDELPAEILDEYCLGIYNRDGELRGSHLYDTNSGNTQRGICSLPFVRQSDGEVVYFPSNLI
ENLFLSNGMSAGNTLAEAQVQCLSEIFERAVKREILEGEMALPDVPQEVLAKYPGILAGIKALEEQGFPVLVKDASLGGE
FPVMCVTLMNPRTGGVFASFGAHPSFEVALERSLTELLQGRSFEGLNDLPQPTFSGQAVTEPNNFVEHFIDSSGVVSWRF
FSAKADFEFVEWDFSGNGENSNAEEAATLFGILEDMGKEVYMAVYEHIGAKACRILVPDYSEIYPVEDLIWDNTNKALQF
RADILNLHNLSKVGLRNLAKGLEHSELDDYTDITTLIGIEFDDNTPWGKLTILELRLLIYLALQKYEQAKDLVEAFLQYN
DNTVERGLFYQAVNVVLEMELDEDLQLEDYEANFRRMFGDERMDAAIGSVNGSVRFYGLTPTSMKLEGLDRHLRLIESYK
KLHAARANFAG

Specific function: Unknown

COG id: COG1944

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0142 family [H]

Homologues:

Organism=Escherichia coli, GI87081799, Length=584, Percent_Identity=47.4315068493151, Blast_Score=531, Evalue=1e-152,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003776 [H]

Pfam domain/function: PF02624 YcaO [H]

EC number: NA

Molecular weight: Translated: 81746; Mature: 81746

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIKVNFLDNLRLEAKFDDFTVVADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCS
CEEEEEEHHCCEEEEECCCEEEEECCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
TRNIPTENIRLSQNNIVDPENRYNQIFKIQVELPADISEKDRQGILRSIDRCTVKKVVQA
CCCCCCCCEEECCCCCCCCHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC
GPEFVIEEVENLDADAQALLMPASTSGAGTCIAGKDLPLEQTIANMSGILADLGMKIEIA
CHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEC
SWRNIVPNVWSLHIRDAQSPMCFTNGKGATKEGALASALGEFIERLNCNFFYNDQFWGEE
CHHCCCCCCEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCHH
IANAEFVHYPDERWFKPGAKDELPAEILDEYCLGIYNRDGELRGSHLYDTNSGNTQRGIC
HCCCCEEECCHHHHCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCEEEECCCCCCCCCEE
SLPFVRQSDGEVVYFPSNLIENLFLSNGMSAGNTLAEAQVQCLSEIFERAVKREILEGEM
CCCCEECCCCCEEEECHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
ALPDVPQEVLAKYPGILAGIKALEEQGFPVLVKDASLGGEFPVMCVTLMNPRTGGVFASF
CCCCCCHHHHHHCCCHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEECCCCCCEEEEC
GAHPSFEVALERSLTELLQGRSFEGLNDLPQPTFSGQAVTEPNNFVEHFIDSSGVVSWRF
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHCCCCCEEEEEE
FSAKADFEFVEWDFSGNGENSNAEEAATLFGILEDMGKEVYMAVYEHIGAKACRILVPDY
EECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC
SEIYPVEDLIWDNTNKALQFRADILNLHNLSKVGLRNLAKGLEHSELDDYTDITTLIGIE
HHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCEEEEEEEE
FDDNTPWGKLTILELRLLIYLALQKYEQAKDLVEAFLQYNDNTVERGLFYQAVNVVLEME
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEC
LDEDLQLEDYEANFRRMFGDERMDAAIGSVNGSVRFYGLTPTSMKLEGLDRHLRLIESYK
CCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHH
KLHAARANFAG
HHHHHHCCCCC
>Mature Secondary Structure
MEIKVNFLDNLRLEAKFDDFTVVADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCS
CEEEEEEHHCCEEEEECCCEEEEECCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
TRNIPTENIRLSQNNIVDPENRYNQIFKIQVELPADISEKDRQGILRSIDRCTVKKVVQA
CCCCCCCCEEECCCCCCCCHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC
GPEFVIEEVENLDADAQALLMPASTSGAGTCIAGKDLPLEQTIANMSGILADLGMKIEIA
CHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEC
SWRNIVPNVWSLHIRDAQSPMCFTNGKGATKEGALASALGEFIERLNCNFFYNDQFWGEE
CHHCCCCCCEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCHH
IANAEFVHYPDERWFKPGAKDELPAEILDEYCLGIYNRDGELRGSHLYDTNSGNTQRGIC
HCCCCEEECCHHHHCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCEEEECCCCCCCCCEE
SLPFVRQSDGEVVYFPSNLIENLFLSNGMSAGNTLAEAQVQCLSEIFERAVKREILEGEM
CCCCEECCCCCEEEECHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
ALPDVPQEVLAKYPGILAGIKALEEQGFPVLVKDASLGGEFPVMCVTLMNPRTGGVFASF
CCCCCCHHHHHHCCCHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEECCCCCCEEEEC
GAHPSFEVALERSLTELLQGRSFEGLNDLPQPTFSGQAVTEPNNFVEHFIDSSGVVSWRF
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHCCCCCEEEEEE
FSAKADFEFVEWDFSGNGENSNAEEAATLFGILEDMGKEVYMAVYEHIGAKACRILVPDY
EECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC
SEIYPVEDLIWDNTNKALQFRADILNLHNLSKVGLRNLAKGLEHSELDDYTDITTLIGIE
HHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCEEEEEEEE
FDDNTPWGKLTILELRLLIYLALQKYEQAKDLVEAFLQYNDNTVERGLFYQAVNVVLEME
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEC
LDEDLQLEDYEANFRRMFGDERMDAAIGSVNGSVRFYGLTPTSMKLEGLDRHLRLIESYK
CCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHH
KLHAARANFAG
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]