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The map label for this gene is ydcL [H]

Identifier: 77458930

GI number: 77458930

Start: 3115042

End: 3115722

Strand: Direct

Name: ydcL [H]

Synonym: Pfl01_2705

Alternate gene names: 77458930

Gene position: 3115042-3115722 (Clockwise)

Preceding gene: 77458929

Following gene: 77458931

Centisome position: 48.38

GC content: 63.14

Gene sequence:

>681_bases
ATGAGTAGCCATCGCTCACTGGCCGTGTTGTTTGCCGCCACCCTCAGCCTGTCGGGGTGCAGCAGCAAGAAGCTTCCGAC
CGAGCCGCAGGCCGGGTTTTTACGGGATTACAGCGTGCTCAAGGAAGGGCAGACCGCTTCGGGGCAGACGATCCTGAGCT
GGGTCAGCCCGGCATTGGCGAGGGGCCGTTACACCCGGGTTTACCTGGCGCCGAGCGAGTTTTATCCACGGCCCCAGCCT
TCGCCGCGCATTCCCCAAAGTACTTTGTCGGGCGTAACCCATTATTACGACGCAGCCCTCAGGCTGGAGCTGGGCAAAGT
GCTGCCGCTGGCGTCGAAACCCGGCCCGAACACACTGATCGTCAAACCGGCCATCACCCAGGTCGCGGCCAGCACTCAGG
GCCTGCGTTTTTATGAATGGCTGCCGGTGACGCTGGTTGCGGCCGGCGTGAGCAGCGCCACCGGCATTCGTGACCGCGAC
AGTGAAATCGCCACGGAAGTGTCCTTCGAGGACGGCTCGACCGGGGAAGTCGTGGCCGAAGTGGTGCGCAAGGGCAAGGG
CGTGCCGCTGGAAAACGACAAACAGGTCATGACGCCCGATAACGTGAAAGCCGTCCTCGATGGCTGGGCCACGGACTTGA
GTCAAACCTATGTGCCGATTCAGCGGGCCGCGCTGCGCTAG

Upstream 100 bases:

>100_bases
AATTCATTCAATGGATCATGACTCACGGCCAGTTGCGCATCGAGTGCTCCGACAACACCCCGCACAGCCACGTCCACGCT
TGAACAAGGAAACACCATTG

Downstream 100 bases:

>100_bases
AAGCAGGGTGGTCTAACATCATCAGGCGTAGTTCGATTTCGGGAGTGCCTGATGTCCGTGAGTGTTGCCCTGCGGTTACC
GTCGATTGACAGCCTGTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MSSHRSLAVLFAATLSLSGCSSKKLPTEPQAGFLRDYSVLKEGQTASGQTILSWVSPALARGRYTRVYLAPSEFYPRPQP
SPRIPQSTLSGVTHYYDAALRLELGKVLPLASKPGPNTLIVKPAITQVAASTQGLRFYEWLPVTLVAAGVSSATGIRDRD
SEIATEVSFEDGSTGEVVAEVVRKGKGVPLENDKQVMTPDNVKAVLDGWATDLSQTYVPIQRAALR

Sequences:

>Translated_226_residues
MSSHRSLAVLFAATLSLSGCSSKKLPTEPQAGFLRDYSVLKEGQTASGQTILSWVSPALARGRYTRVYLAPSEFYPRPQP
SPRIPQSTLSGVTHYYDAALRLELGKVLPLASKPGPNTLIVKPAITQVAASTQGLRFYEWLPVTLVAAGVSSATGIRDRD
SEIATEVSFEDGSTGEVVAEVVRKGKGVPLENDKQVMTPDNVKAVLDGWATDLSQTYVPIQRAALR
>Mature_225_residues
SSHRSLAVLFAATLSLSGCSSKKLPTEPQAGFLRDYSVLKEGQTASGQTILSWVSPALARGRYTRVYLAPSEFYPRPQPS
PRIPQSTLSGVTHYYDAALRLELGKVLPLASKPGPNTLIVKPAITQVAASTQGLRFYEWLPVTLVAAGVSSATGIRDRDS
EIATEVSFEDGSTGEVVAEVVRKGKGVPLENDKQVMTPDNVKAVLDGWATDLSQTYVPIQRAALR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787701, Length=198, Percent_Identity=38.8888888888889, Blast_Score=151, Evalue=3e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021747 [H]

Pfam domain/function: PF11769 DUF3313 [H]

EC number: NA

Molecular weight: Translated: 24316; Mature: 24185

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSHRSLAVLFAATLSLSGCSSKKLPTEPQAGFLRDYSVLKEGQTASGQTILSWVSPALA
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHH
RGRYTRVYLAPSEFYPRPQPSPRIPQSTLSGVTHYYDAALRLELGKVLPLASKPGPNTLI
CCCEEEEEECCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEHHHCCCCCCCCCCCEEE
VKPAITQVAASTQGLRFYEWLPVTLVAAGVSSATGIRDRDSEIATEVSFEDGSTGEVVAE
ECHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCHHHEEEECCCCCHHHHHHH
VVRKGKGVPLENDKQVMTPDNVKAVLDGWATDLSQTYVPIQRAALR
HHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSHRSLAVLFAATLSLSGCSSKKLPTEPQAGFLRDYSVLKEGQTASGQTILSWVSPALA
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHH
RGRYTRVYLAPSEFYPRPQPSPRIPQSTLSGVTHYYDAALRLELGKVLPLASKPGPNTLI
CCCEEEEEECCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEHHHCCCCCCCCCCCEEE
VKPAITQVAASTQGLRFYEWLPVTLVAAGVSSATGIRDRDSEIATEVSFEDGSTGEVVAE
ECHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCHHHEEEECCCCCHHHHHHH
VVRKGKGVPLENDKQVMTPDNVKAVLDGWATDLSQTYVPIQRAALR
HHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]