Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77458929

Identifier: 77458929

GI number: 77458929

Start: 3114713

End: 3115024

Strand: Direct

Name: 77458929

Synonym: Pfl01_2704

Alternate gene names: NA

Gene position: 3114713-3115024 (Clockwise)

Preceding gene: 77458926

Following gene: 77458930

Centisome position: 48.38

GC content: 61.54

Gene sequence:

>312_bases
ATGAAGGACATGAACAGCGGCTACATCACCCGGGACCATGGCGCCGTGCGCCCGTTGATCCTGACCCAGCGCACCACCGC
ACCGGGCCCGGACACGCCGATCCTGTTCCAGGAGACGTGCCTGGGGCTGGCCAACGATCAGAGTCAGTTGATCCTGCGCC
GCTATTTCGAACGGTTCAGCCCGACCGAGGCCCATTGGGTCGAATACCTGCACACGATTCCTACCGCCGAATTCATTCAA
TGGATCATGACTCACGGCCAGTTGCGCATCGAGTGCTCCGACAACACCCCGCACAGCCACGTCCACGCTTGA

Upstream 100 bases:

>100_bases
TTTCAATCCTGCAACATTCCTTCAGCGCGGACATCAGCCGGACATCGTCGGGCAAACATCCGCAGGCACTCTGCAGGCCT
TCCAACCAAGGGGGCTCAAC

Downstream 100 bases:

>100_bases
ACAAGGAAACACCATTGATGAGTAGCCATCGCTCACTGGCCGTGTTGTTTGCCGCCACCCTCAGCCTGTCGGGGTGCAGC
AGCAAGAAGCTTCCGACCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MKDMNSGYITRDHGAVRPLILTQRTTAPGPDTPILFQETCLGLANDQSQLILRRYFERFSPTEAHWVEYLHTIPTAEFIQ
WIMTHGQLRIECSDNTPHSHVHA

Sequences:

>Translated_103_residues
MKDMNSGYITRDHGAVRPLILTQRTTAPGPDTPILFQETCLGLANDQSQLILRRYFERFSPTEAHWVEYLHTIPTAEFIQ
WIMTHGQLRIECSDNTPHSHVHA
>Mature_103_residues
MKDMNSGYITRDHGAVRPLILTQRTTAPGPDTPILFQETCLGLANDQSQLILRRYFERFSPTEAHWVEYLHTIPTAEFIQ
WIMTHGQLRIECSDNTPHSHVHA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11872; Mature: 11872

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDMNSGYITRDHGAVRPLILTQRTTAPGPDTPILFQETCLGLANDQSQLILRRYFERFS
CCCCCCCCEECCCCCCCCEEEECCCCCCCCCCCEEEHHHHCCCCCCHHHHHHHHHHHHCC
PTEAHWVEYLHTIPTAEFIQWIMTHGQLRIECSDNTPHSHVHA
CCHHHHHHHHHHCCHHHHHHHHHHCCEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MKDMNSGYITRDHGAVRPLILTQRTTAPGPDTPILFQETCLGLANDQSQLILRRYFERFS
CCCCCCCCEECCCCCCCCEEEECCCCCCCCCCCEEEHHHHCCCCCCHHHHHHHHHHHHCC
PTEAHWVEYLHTIPTAEFIQWIMTHGQLRIECSDNTPHSHVHA
CCHHHHHHHHHHCCHHHHHHHHHHCCEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA