Click here to switch to the map view.

The map label for this gene is yigL [H]

Identifier: 77458813

GI number: 77458813

Start: 2965865

End: 2966674

Strand: Direct

Name: yigL [H]

Synonym: Pfl01_2588

Alternate gene names: 77458813

Gene position: 2965865-2966674 (Clockwise)

Preceding gene: 77458812

Following gene: 77458817

Centisome position: 46.07

GC content: 63.95

Gene sequence:

>810_bases
ATGAGTGAGCCGATCCGTTTTCTGTTGAGCGACATGGACGGCACGCTGTTGTTGCCCGATCACAGCCTGAGTCAGCGCAC
TATCGACGCGGTTCGTTCGCTGCGCGAAGCGGGCGTGTTGTTCAGTCTCGCCACGGGACGGCCGCCCAAAGCGATGCTGC
AACAAATCGAAGCCTTGGGCGTCGATCTGCCGACCGCTGCGTTCAATGGCGGCACGATCGTCAATCCGGATGGCAGCATT
CTGGTCGCGCATTACCTGCCGGCCACGGCAGCGTTGACCGCACTGGCACTGTTCGCCGATCAGCCGGATGTCGAAATCTG
GGTGTTCAGCGGTGGCGACTGGCTGCTCAAGGATCCGCACGGGCCGATGGTGCCGCGCGAGCAGCATGGGCTCGGTTATC
CGCCGGTGGTGGTCGACAGCTTCGAGCCGTATCTGGAGCGCATCGACAAGATTGTGGCGACCAGCAACAACACTGAGCTG
CTGATCGAACTGGAGGCGCGGTTGCTGCCGAAGGTCGAAGGCATGGCACAGGTGTCGCGCTCGCAACCGGTGTACCTGGA
CGTGACGGCGGTCGAGGCCAACAAGGGCTCGGCGCTGGTCACGCTGGCTGAACACCTCGGTGTGCCGCTGGCGCAAACGG
CGGCGATTGGCGATGGCGGCAATGATCCGGCGATGTTCCATGTTGCCGGTCTCTCGATCGCCATGGGCCAGGCCGAGGAC
GCGGTGAAGCGTCAGGCCGACGTGGTGACCGGGCGCAACACCGAGGACGGTGTGGCGCAGGCCATCGAGCAGCACATATT
GCCGCGCTGA

Upstream 100 bases:

>100_bases
AACAGGACGCCAGTGTACAAACCTATGCCGCTGGCGAAGACGGGCCGAAAGCCGCCGATGATCTGCTGACTCGCGATGGT
CGCGTCTGGCATGGTCTCGG

Downstream 100 bases:

>100_bases
TTTATGTATAAAAAAACGGGAGCCCCAGGGCTCCCGTTGTTGTTTCTACAGCCAGTAGCTCACGGCGTACCAGCCGAGCA
ATCCCATCACCACGGTGTAA

Product: Cof protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MSEPIRFLLSDMDGTLLLPDHSLSQRTIDAVRSLREAGVLFSLATGRPPKAMLQQIEALGVDLPTAAFNGGTIVNPDGSI
LVAHYLPATAALTALALFADQPDVEIWVFSGGDWLLKDPHGPMVPREQHGLGYPPVVVDSFEPYLERIDKIVATSNNTEL
LIELEARLLPKVEGMAQVSRSQPVYLDVTAVEANKGSALVTLAEHLGVPLAQTAAIGDGGNDPAMFHVAGLSIAMGQAED
AVKRQADVVTGRNTEDGVAQAIEQHILPR

Sequences:

>Translated_269_residues
MSEPIRFLLSDMDGTLLLPDHSLSQRTIDAVRSLREAGVLFSLATGRPPKAMLQQIEALGVDLPTAAFNGGTIVNPDGSI
LVAHYLPATAALTALALFADQPDVEIWVFSGGDWLLKDPHGPMVPREQHGLGYPPVVVDSFEPYLERIDKIVATSNNTEL
LIELEARLLPKVEGMAQVSRSQPVYLDVTAVEANKGSALVTLAEHLGVPLAQTAAIGDGGNDPAMFHVAGLSIAMGQAED
AVKRQADVVTGRNTEDGVAQAIEQHILPR
>Mature_268_residues
SEPIRFLLSDMDGTLLLPDHSLSQRTIDAVRSLREAGVLFSLATGRPPKAMLQQIEALGVDLPTAAFNGGTIVNPDGSIL
VAHYLPATAALTALALFADQPDVEIWVFSGGDWLLKDPHGPMVPREQHGLGYPPVVVDSFEPYLERIDKIVATSNNTELL
IELEARLLPKVEGMAQVSRSQPVYLDVTAVEANKGSALVTLAEHLGVPLAQTAAIGDGGNDPAMFHVAGLSIAMGQAEDA
VKRQADVVTGRNTEDGVAQAIEQHILPR

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI48994981, Length=266, Percent_Identity=30.8270676691729, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI2367265, Length=286, Percent_Identity=29.7202797202797, Blast_Score=98, Evalue=4e-22,
Organism=Escherichia coli, GI1786982, Length=274, Percent_Identity=26.6423357664234, Blast_Score=91, Evalue=7e-20,
Organism=Escherichia coli, GI87081741, Length=233, Percent_Identity=30.9012875536481, Blast_Score=91, Evalue=8e-20,
Organism=Escherichia coli, GI87081790, Length=267, Percent_Identity=25.0936329588015, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: NA

Molecular weight: Translated: 28663; Mature: 28532

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: PS01228 COF_1 ; PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPIRFLLSDMDGTLLLPDHSLSQRTIDAVRSLREAGVLFSLATGRPPKAMLQQIEALG
CCCHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHC
VDLPTAAFNGGTIVNPDGSILVAHYLPATAALTALALFADQPDVEIWVFSGGDWLLKDPH
CCCCCCCCCCCEEECCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEEECCCEEEECCC
GPMVPREQHGLGYPPVVVDSFEPYLERIDKIVATSNNTELLIELEARLLPKVEGMAQVSR
CCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHCCCCCCEEEEEEECHHCCCHHHHHHHHC
SQPVYLDVTAVEANKGSALVTLAEHLGVPLAQTAAIGDGGNDPAMFHVAGLSIAMGQAED
CCCEEEEEEEEECCCCCEEEEEHHHHCCCHHHHEECCCCCCCCEEEEEECCEEECCCHHH
AVKRQADVVTGRNTEDGVAQAIEQHILPR
HHHHHHHHHCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
SEPIRFLLSDMDGTLLLPDHSLSQRTIDAVRSLREAGVLFSLATGRPPKAMLQQIEALG
CCHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHC
VDLPTAAFNGGTIVNPDGSILVAHYLPATAALTALALFADQPDVEIWVFSGGDWLLKDPH
CCCCCCCCCCCEEECCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEEECCCEEEECCC
GPMVPREQHGLGYPPVVVDSFEPYLERIDKIVATSNNTELLIELEARLLPKVEGMAQVSR
CCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHCCCCCCEEEEEEECHHCCCHHHHHHHHC
SQPVYLDVTAVEANKGSALVTLAEHLGVPLAQTAAIGDGGNDPAMFHVAGLSIAMGQAED
CCCEEEEEEEEECCCCCEEEEEHHHHCCCHHHHEECCCCCCCCEEEEEECCEEECCCHHH
AVKRQADVVTGRNTEDGVAQAIEQHILPR
HHHHHHHHHCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]